RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 KCNT2Q6UVM3 1135 aa13.2□□□□□ -0.3
TTC28-203ENST00000442232 PIK3AP1Q6ZUJ8 805 aa13.2□□□□□ -0.3
TTC28-203ENST00000442232 HELQQ8TDG4 1101 aa13.2□□□□□ -0.3
TTC28-203ENST00000442232 MRPS27Q92552 414 aaKnown RBP13.2□□□□□ -0.3
TTC28-203ENST00000442232 NLRP4Q96MN2 994 aa13.2□□□□□ -0.3
TTC28-203ENST00000442232 CASD1Q96PB1 797 aa13.2□□□□□ -0.3
TTC28-203ENST00000442232 TCF25Q9BQ70 676 aa13.2□□□□□ -0.3
TTC28-203ENST00000442232 NGRNQ9NPE2 291 aaKnown RBP13.2□□□□□ -0.3
TTC28-203ENST00000442232 PPP4R2Q9NY27 417 aa13.2□□□□□ -0.3
TTC28-203ENST00000442232 SPG21Q9NZD8 308 aa13.2□□□□□ -0.3
TTC28-203ENST00000442232 ORC3Q9UBD5 711 aaPredicted RBP13.2□□□□□ -0.3
TTC28-203ENST00000442232 HCSTQ9UBK5 93 aa13.2□□□□□ -0.3
TTC28-203ENST00000442232 BARX2Q9UMQ3 279 aaPredicted RBP13.2□□□□□ -0.3
TTC28-203ENST00000442232 PIN4Q9Y237 131 aaKnown RBP13.2□□□□□ -0.3
TTC28-203ENST00000442232 PPME1Q9Y570 386 aa13.2□□□□□ -0.3
TTC28-203ENST00000442232 PCDHGC5Q9Y5F6 944 aa13.2□□□□□ -0.3
TTC28-203ENST00000442232 ARID2Q68CP9 1835 aa13.2□□□□□ -0.3
TTC28-203ENST00000442232 A0A087WZ62 844 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 A0A0U1RQF3 1178 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 TMEM150BA6NC51 233 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 C19orf67A6NJJ6 358 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 TBX3O15119 743 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 MAFO75444 373 aaPredicted RBP13.19□□□□□ -0.3
TTC28-203ENST00000442232 KRT2P35908 639 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 RAB27AP51159 221 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 PLCB3Q01970 1234 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 COASYQ13057 564 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 TRIM29Q14134 588 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 DUSP6Q16828 381 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 PLA2G4FQ68DD2 849 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 NCAPH2Q6IBW4 605 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 B3GNT9Q6UX72 402 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 CATSPER4Q7RTX7 472 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 TMC7Q7Z402 723 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 SLFN12Q8IYM2 578 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 TMEM87AQ8NBN3 555 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 SMRP1Q8NCR6 262 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 MSLNLQ96KJ4 702 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 CEP170P1Q96L14 293 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 CCDC43Q96MW1 224 aaKnown RBP13.19□□□□□ -0.3
TTC28-203ENST00000442232 SH2D3AQ9BRG2 576 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 FDXACB1Q9BRP7 624 aaPredicted RBP13.19□□□□□ -0.3
TTC28-203ENST00000442232 TPCN1Q9ULQ1 816 aa13.19□□□□□ -0.3
TTC28-203ENST00000442232 ARIH1Q9Y4X5 557 aaPredicted RBP13.19□□□□□ -0.3
TTC28-203ENST00000442232 IGKV6-21A0A0C4DH24 114 aa13.18□□□□□ -0.3
TTC28-203ENST00000442232 FSCN2O14926 492 aa13.18□□□□□ -0.3
TTC28-203ENST00000442232 PER2O15055 1255 aa13.18□□□□□ -0.3
TTC28-203ENST00000442232 GAS2O43903 313 aaKnown RBP13.18□□□□□ -0.3
TTC28-203ENST00000442232 CSDE1O75534 798 aaKnown RBP13.18□□□□□ -0.3
TTC28-203ENST00000442232 EYA4O95677 639 aa13.18□□□□□ -0.3
TTC28-203ENST00000442232 P4HBP07237 508 aaKnown RBP13.18□□□□□ -0.3
TTC28-203ENST00000442232 RFC5P40937 340 aa13.18□□□□□ -0.3
TTC28-203ENST00000442232 ALDH7A1P49419 539 aaKnown RBP13.18□□□□□ -0.3
TTC28-203ENST00000442232 AK2P54819 239 aa13.18□□□□□ -0.3
TTC28-203ENST00000442232 ERVFC1P60507 584 aa13.18□□□□□ -0.3
TTC28-203ENST00000442232 DRP2Q13474 957 aa13.18□□□□□ -0.3
TTC28-203ENST00000442232 SMC1AQ14683 1233 aaKnown RBP13.18□□□□□ -0.3
TTC28-203ENST00000442232 CLLU1OSQ5K130 101 aa13.18□□□□□ -0.3
TTC28-203ENST00000442232 GLB1LQ6UWU2 654 aa13.18□□□□□ -0.3
TTC28-203ENST00000442232 ANO5Q75V66 913 aa13.18□□□□□ -0.3
TTC28-203ENST00000442232 OTUD6AQ7L8S5 288 aa13.18□□□□□ -0.3
TTC28-203ENST00000442232 PSPC1Q8WXF1 523 aaKnown RBP13.18□□□□□ -0.3
TTC28-203ENST00000442232 TMEM169Q96HH4 297 aa13.18□□□□□ -0.3
TTC28-203ENST00000442232 LXNQ9BS40 222 aa13.18□□□□□ -0.3
TTC28-203ENST00000442232 KCNMB3Q9NPA1 279 aa13.18□□□□□ -0.3
TTC28-203ENST00000442232 C11orf16Q9NQ32 467 aa13.18□□□□□ -0.3
TTC28-203ENST00000442232 CYP26B1Q9NR63 512 aa13.18□□□□□ -0.3
TTC28-203ENST00000442232 RNF19AQ9NV58 838 aa13.18□□□□□ -0.3
TTC28-203ENST00000442232 CLEC1BQ9P126 229 aa13.18□□□□□ -0.3
TTC28-203ENST00000442232 VAV3Q9UKW4 847 aa13.18□□□□□ -0.3
TTC28-203ENST00000442232 USP15Q9Y4E8 981 aaPredicted RBP13.18□□□□□ -0.3
TTC28-203ENST00000442232 COL4A3BPQ9Y5P4 624 aa13.18□□□□□ -0.3
TTC28-203ENST00000442232 GLP2RO95838 553 aa13.17□□□□□ -0.3
TTC28-203ENST00000442232 PHKA2P46019 1235 aa13.17□□□□□ -0.3
TTC28-203ENST00000442232 RNASELQ05823 741 aaKnown RBP13.17□□□□□ -0.3
TTC28-203ENST00000442232 EPHA7Q15375 998 aa13.17□□□□□ -0.3
TTC28-203ENST00000442232 LLGL2Q6P1M3 1020 aa13.17□□□□□ -0.3
TTC28-203ENST00000442232 LRRC55Q6ZSA7 311 aa13.17□□□□□ -0.3
TTC28-203ENST00000442232 POTEDQ86YR6 584 aa13.17□□□□□ -0.3
TTC28-203ENST00000442232 URGCPQ8TCY9 931 aa13.17□□□□□ -0.3
TTC28-203ENST00000442232 TCP11Q8WWU5 503 aa13.17□□□□□ -0.3
TTC28-203ENST00000442232 PGBD4Q96DM1 585 aa13.17□□□□□ -0.3
TTC28-203ENST00000442232 EML1O00423 815 aa13.16□□□□□ -0.3
TTC28-203ENST00000442232 ZC3H11AO75152 810 aaKnown RBP eCLIP13.16□□□□□ -0.3
TTC28-203ENST00000442232 STBD1O95210 358 aa13.16□□□□□ -0.3
TTC28-203ENST00000442232 YWHABP31946 246 aaKnown RBP13.16□□□□□ -0.3
TTC28-203ENST00000442232 PBX3P40426 434 aa13.16□□□□□ -0.3
TTC28-203ENST00000442232 TECP42680 631 aa13.16□□□□□ -0.3
TTC28-203ENST00000442232 NPEPPSP55786 919 aa13.16□□□□□ -0.3
TTC28-203ENST00000442232 BCAR1P56945 870 aa13.16□□□□□ -0.3
TTC28-203ENST00000442232 CALCRLQ16602 461 aa13.16□□□□□ -0.3
TTC28-203ENST00000442232 XKR9Q5GH70 373 aa13.16□□□□□ -0.3
TTC28-203ENST00000442232 ERICH6BQ5W0A0 696 aa13.16□□□□□ -0.3
TTC28-203ENST00000442232 ZNF598Q86UK7 904 aaKnown RBP13.16□□□□□ -0.3
TTC28-203ENST00000442232 C4orf19Q8IY42 314 aa13.16□□□□□ -0.3
TTC28-203ENST00000442232 OXER1Q8TDS5 423 aa13.16□□□□□ -0.3
TTC28-203ENST00000442232 GTF3C6Q969F1 213 aa13.16□□□□□ -0.3
TTC28-203ENST00000442232 TRAIPQ9BWF2 469 aa13.16□□□□□ -0.3
TTC28-203ENST00000442232 PHF7Q9BWX1 381 aaPredicted RBP13.16□□□□□ -0.3
TTC28-203ENST00000442232 ZSWIM4Q9H7M6 989 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms