RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 AFPP02771 609 aaKnown RBP21.92■■□□□ 1.1
SHOX2-203ENST00000441443 CREB1P16220 341 aa21.92■■□□□ 1.1
SHOX2-203ENST00000441443 MAP2K1Q02750 393 aaPredicted RBP21.92■■□□□ 1.1
SHOX2-203ENST00000441443 ANKRD20A2Q5SQ80 823 aa21.92■■□□□ 1.1
SHOX2-203ENST00000441443 ANKRD20A1Q5TYW2 823 aa21.92■■□□□ 1.1
SHOX2-203ENST00000441443 ANKRD20A3Q5VUR7 823 aa21.92■■□□□ 1.1
SHOX2-203ENST00000441443 GPBP1Q86WP2 473 aa21.92■■□□□ 1.1
SHOX2-203ENST00000441443 PARD3BQ8TEW8 1205 aa21.92■■□□□ 1.1
SHOX2-203ENST00000441443 FOXO6A8MYZ6 492 aa21.92■■□□□ 1.1
SHOX2-203ENST00000441443 CDK8P49336 464 aa21.92■■□□□ 1.1
SHOX2-203ENST00000441443 GLYCTKQ8IVS8 523 aa21.92■■□□□ 1.1
SHOX2-203ENST00000441443 SCN7AQ01118 1682 aa21.92■■□□□ 1.1
SHOX2-203ENST00000441443 GOLGA6L10A0A0M3HER8 536 aa21.91■■□□□ 1.1
SHOX2-203ENST00000441443 KRT18P05783 430 aaKnown RBP21.91■■□□□ 1.1
SHOX2-203ENST00000441443 PRKCIP41743 596 aa21.91■■□□□ 1.1
SHOX2-203ENST00000441443 MSH2P43246 934 aa21.91■■□□□ 1.1
SHOX2-203ENST00000441443 GALNTL6Q49A17 601 aa21.91■■□□□ 1.1
SHOX2-203ENST00000441443 NUGGCQ68CJ6 796 aa21.91■■□□□ 1.1
SHOX2-203ENST00000441443 COL23A1Q86Y22 540 aaPredicted RBP21.91■■□□□ 1.1
SHOX2-203ENST00000441443 CCDC134Q9H6E4 229 aa21.91■■□□□ 1.1
SHOX2-203ENST00000441443 POLLQ9UGP5 575 aa21.91■■□□□ 1.1
SHOX2-203ENST00000441443 NENFQ9UMX5 172 aa21.91■■□□□ 1.1
SHOX2-203ENST00000441443 IRS2Q9Y4H2 1338 aa21.91■■□□□ 1.1
SHOX2-203ENST00000441443 RASGRF2O14827 1237 aa21.91■■□□□ 1.1
SHOX2-203ENST00000441443 GYS1P13807 737 aa21.91■■□□□ 1.1
SHOX2-203ENST00000441443 ABL2P42684 1182 aa21.91■■□□□ 1.1
SHOX2-203ENST00000441443 ADCY2Q08462 1091 aa21.91■■□□□ 1.1
SHOX2-203ENST00000441443 UBE2SQ16763 222 aa21.91■■□□□ 1.1
SHOX2-203ENST00000441443 LNX1Q8TBB1 728 aaPredicted RBP21.91■■□□□ 1.1
SHOX2-203ENST00000441443 MXD3Q9BW11 206 aa21.91■■□□□ 1.1
SHOX2-203ENST00000441443 RTFDC1Q9BY42 306 aaPredicted RBP21.91■■□□□ 1.1
SHOX2-203ENST00000441443 GRHL1Q9NZI5 618 aa21.91■■□□□ 1.1
SHOX2-203ENST00000441443 ADAM22Q9P0K1 906 aa21.91■■□□□ 1.1
SHOX2-203ENST00000441443 BTAF1O14981 1849 aa21.91■■□□□ 1.1
SHOX2-203ENST00000441443 FRMPD2Q68DX3 1309 aaPredicted RBP21.91■■□□□ 1.1
SHOX2-203ENST00000441443 RPL21P46778 160 aaKnown RBP21.9■■□□□ 1.1
SHOX2-203ENST00000441443 BNIP1Q12981 228 aa21.9■■□□□ 1.1
SHOX2-203ENST00000441443 AUHQ13825 339 aaKnown RBP21.9■■□□□ 1.1
SHOX2-203ENST00000441443 CCDC25Q86WR0 208 aa21.9■■□□□ 1.1
SHOX2-203ENST00000441443 EGFL6Q8IUX8 553 aa21.9■■□□□ 1.1
SHOX2-203ENST00000441443 LAMB1P07942 1786 aa21.9■■□□□ 1.1
SHOX2-203ENST00000441443 KIAA1551Q9HCM1 1747 aa21.9■■□□□ 1.1
SHOX2-203ENST00000441443 A0A0A6YYK5 440 aaPredicted RBP21.9■■□□□ 1.1
SHOX2-203ENST00000441443 PLA2G4BP0C869 781 aa21.9■■□□□ 1.1
SHOX2-203ENST00000441443 XRCC5P13010 732 aaKnown RBP21.9■■□□□ 1.1
SHOX2-203ENST00000441443 PLCG2P16885 1265 aa21.9■■□□□ 1.1
SHOX2-203ENST00000441443 MAPK7Q13164 816 aa21.9■■□□□ 1.1
SHOX2-203ENST00000441443 EXOC3L1Q86VI1 746 aa21.9■■□□□ 1.1
SHOX2-203ENST00000441443 FITM2Q8N6M3 262 aa21.9■■□□□ 1.1
SHOX2-203ENST00000441443 SPDYE1Q8NFV5 336 aaPredicted RBP21.9■■□□□ 1.1
SHOX2-203ENST00000441443 ALG3Q92685 438 aa21.9■■□□□ 1.1
SHOX2-203ENST00000441443 HAS1Q92839 578 aa21.9■■□□□ 1.1
SHOX2-203ENST00000441443 POTEB3A0JP26 581 aa21.9■■□□□ 1.1
SHOX2-203ENST00000441443 POTECB2RU33 542 aa21.9■■□□□ 1.1
SHOX2-203ENST00000441443 OAS1P00973 400 aaKnown RBP21.9■■□□□ 1.1
SHOX2-203ENST00000441443 ATP2A2P16615 1042 aaKnown RBP21.9■■□□□ 1.1
SHOX2-203ENST00000441443 MKRN4PQ13434 485 aaPredicted RBP21.9■■□□□ 1.1
SHOX2-203ENST00000441443 SLMAPQ14BN4 828 aa21.9■■□□□ 1.1
SHOX2-203ENST00000441443 TRIM68Q6AZZ1 485 aa21.9■■□□□ 1.1
SHOX2-203ENST00000441443 POTEBQ6S5H4 581 aa21.9■■□□□ 1.1
SHOX2-203ENST00000441443 ANKRD42Q8N9B4 389 aa21.9■■□□□ 1.1
SHOX2-203ENST00000441443 RNF217Q8TC41 542 aa21.9■■□□□ 1.1
SHOX2-203ENST00000441443 TTC7AQ9ULT0 858 aaPredicted RBP21.9■■□□□ 1.1
SHOX2-203ENST00000441443 SUN1O94901 812 aa21.89■■□□□ 1.1
SHOX2-203ENST00000441443 SLURP2P0DP57 97 aa21.89■■□□□ 1.1
SHOX2-203ENST00000441443 ZNF131P52739 623 aa21.89■■□□□ 1.1
SHOX2-203ENST00000441443 PLS1Q14651 629 aa21.89■■□□□ 1.1
SHOX2-203ENST00000441443 LONRF1Q17RB8 773 aa21.89■■□□□ 1.1
SHOX2-203ENST00000441443 GCNT4Q9P109 453 aa21.89■■□□□ 1.1
SHOX2-203ENST00000441443 USP17L5A8MUK1 530 aa21.89■■□□□ 1.09
SHOX2-203ENST00000441443 THEMIS2Q5TEJ8 643 aa21.89■■□□□ 1.09
SHOX2-203ENST00000441443 GDAP1Q8TB36 358 aa21.89■■□□□ 1.09
SHOX2-203ENST00000441443 CNKSR1Q969H4 720 aa21.89■■□□□ 1.09
SHOX2-203ENST00000441443 CEP95Q96GE4 821 aa21.89■■□□□ 1.09
SHOX2-203ENST00000441443 SIX2Q9NPC8 291 aa21.89■■□□□ 1.09
SHOX2-203ENST00000441443 ADCY7P51828 1080 aa21.88■■□□□ 1.09
SHOX2-203ENST00000441443 ORC2Q13416 577 aaPredicted RBP21.88■■□□□ 1.09
SHOX2-203ENST00000441443 SEPT2Q15019 361 aa21.88■■□□□ 1.09
SHOX2-203ENST00000441443 ARHGEF26Q96DR7 871 aa21.88■■□□□ 1.09
SHOX2-203ENST00000441443 ARHGEF3Q9NR81 526 aa21.88■■□□□ 1.09
SHOX2-203ENST00000441443 DDX25Q9UHL0 483 aaKnown RBP21.88■■□□□ 1.09
SHOX2-203ENST00000441443 PCDHA12Q9UN75 941 aa21.88■■□□□ 1.09
SHOX2-203ENST00000441443 RIPK2O43353 540 aa21.88■■□□□ 1.09
SHOX2-203ENST00000441443 AKAP3O75969 853 aa21.88■■□□□ 1.09
SHOX2-203ENST00000441443 CASP4P49662 377 aa21.88■■□□□ 1.09
SHOX2-203ENST00000441443 EPHA7Q15375 998 aa21.88■■□□□ 1.09
SHOX2-203ENST00000441443 TAF11Q15544 211 aa21.88■■□□□ 1.09
SHOX2-203ENST00000441443 LRRC47Q8N1G4 583 aaKnown RBP21.88■■□□□ 1.09
SHOX2-203ENST00000441443 SEPT11Q9NVA2 429 aaKnown RBP21.88■■□□□ 1.09
SHOX2-203ENST00000441443 CORO1CQ9ULV4 474 aaPredicted RBP21.88■■□□□ 1.09
SHOX2-203ENST00000441443 FAM187AA6NFU0 413 aa21.88■■□□□ 1.09
SHOX2-203ENST00000441443 SCNN1DP51172 638 aa21.88■■□□□ 1.09
SHOX2-203ENST00000441443 NPEPPSP55786 919 aa21.88■■□□□ 1.09
SHOX2-203ENST00000441443 BLMHQ13867 455 aa21.88■■□□□ 1.09
SHOX2-203ENST00000441443 SLC17A8Q8NDX2 589 aa21.88■■□□□ 1.09
SHOX2-203ENST00000441443 RBM17Q96I25 401 aaKnown RBP21.88■■□□□ 1.09
SHOX2-203ENST00000441443 RMDN2Q96LZ7 410 aa21.88■■□□□ 1.09
SHOX2-203ENST00000441443 TNRC6CQ9HCJ0 1690 aaKnown RBP21.87■■□□□ 1.09
SHOX2-203ENST00000441443 TMEM120BA0PK00 339 aa21.87■■□□□ 1.09
SHOX2-203ENST00000441443 MYBL1P10243 752 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms