RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 TMEM266Q2M3C6 531 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 GALNTL6Q49A17 601 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 CHADLQ6NUI6 762 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 FAM133AQ8N9E0 248 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 NEDD1Q8NHV4 660 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 MICAL1Q8TDZ2 1067 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 BLOC1S4Q9NUP1 217 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 INTS9Q9NV88 658 aaKnown RBP12.88□□□□□ -0.35
LTBR-203ENST00000441074 SUCLA2Q9P2R7 463 aaPredicted RBP12.88□□□□□ -0.35
LTBR-203ENST00000441074 SEC63Q9UGP8 760 aaKnown RBP12.88□□□□□ -0.35
LTBR-203ENST00000441074 SMCO2A6NFE2 343 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 UBOX5O94941 541 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 TECP42680 631 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 JAG1P78504 1218 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 GRB10Q13322 594 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 SEPT2Q15019 361 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 SLFN11Q7Z7L1 901 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 CROCCP2Q86T23 111 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 SUPT20HQ8NEM7 779 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 TPCN2Q8NHX9 752 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 ATP8B4Q8TF62 1192 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 RAB17Q9H0T7 212 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 DPH5Q9H2P9 285 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 EPB41L4BQ9H329 900 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 ABCF3Q9NUQ8 709 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.88□□□□□ -0.35
LTBR-203ENST00000441074 STXBP5LQ9Y2K9 1186 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 FER1L6Q2WGJ9 1857 aa12.87□□□□□ -0.35
LTBR-203ENST00000441074 A6NHS1 94 aa12.87□□□□□ -0.35
LTBR-203ENST00000441074 LUC7L3O95232 432 aaKnown RBP12.87□□□□□ -0.35
LTBR-203ENST00000441074 GDF11O95390 407 aa12.87□□□□□ -0.35
LTBR-203ENST00000441074 EGFRP00533 1210 aa12.87□□□□□ -0.35
LTBR-203ENST00000441074 AGTP01019 485 aa12.87□□□□□ -0.35
LTBR-203ENST00000441074 SHBGP04278 402 aa12.87□□□□□ -0.35
LTBR-203ENST00000441074 VIMP08670 466 aaKnown RBP12.87□□□□□ -0.35
LTBR-203ENST00000441074 PEX19P40855 299 aa12.87□□□□□ -0.35
LTBR-203ENST00000441074 ZCWPW2Q504Y3 356 aa12.87□□□□□ -0.35
LTBR-203ENST00000441074 PEX26Q7Z412 305 aa12.87□□□□□ -0.35
LTBR-203ENST00000441074 GBP7Q8N8V2 638 aaPredicted RBP12.87□□□□□ -0.35
LTBR-203ENST00000441074 LARP4BQ92615 738 aaKnown RBP12.87□□□□□ -0.35
LTBR-203ENST00000441074 CDK5RAP3Q96JB5 506 aa12.87□□□□□ -0.35
LTBR-203ENST00000441074 ANKRD27Q96NW4 1050 aa12.87□□□□□ -0.35
LTBR-203ENST00000441074 PABPC3Q9H361 631 aaKnown RBP12.87□□□□□ -0.35
LTBR-203ENST00000441074 GOLPH3Q9H4A6 298 aa12.87□□□□□ -0.35
LTBR-203ENST00000441074 ECT2Q9H8V3 914 aa12.87□□□□□ -0.35
LTBR-203ENST00000441074 MTMR4Q9NYA4 1195 aa12.87□□□□□ -0.35
LTBR-203ENST00000441074 TTC7AQ9ULT0 858 aaPredicted RBP12.87□□□□□ -0.35
LTBR-203ENST00000441074 BZW2Q9Y6E2 419 aaKnown RBP12.87□□□□□ -0.35
LTBR-203ENST00000441074 ATP8B3O60423 1300 aa12.87□□□□□ -0.35
LTBR-203ENST00000441074 IGF2BP3O00425 579 aaKnown RBP eCLIP12.87□□□□□ -0.35
LTBR-203ENST00000441074 SNX3O60493 162 aa12.87□□□□□ -0.35
LTBR-203ENST00000441074 GNA14O95837 355 aa12.87□□□□□ -0.35
LTBR-203ENST00000441074 DDX60LQ5H9U9 1706 aaKnown RBP12.87□□□□□ -0.35
LTBR-203ENST00000441074 DYMQ7RTS9 669 aa12.87□□□□□ -0.35
LTBR-203ENST00000441074 REXO1Q8N1G1 1221 aaKnown RBP12.87□□□□□ -0.35
LTBR-203ENST00000441074 NEK9Q8TD19 979 aa12.87□□□□□ -0.35
LTBR-203ENST00000441074 CEP63Q96MT8 703 aa12.87□□□□□ -0.35
LTBR-203ENST00000441074 PRMT1Q99873 361 aaKnown RBP12.87□□□□□ -0.35
LTBR-203ENST00000441074 CELF4Q9BZC1 486 aaKnown RBP12.87□□□□□ -0.35
LTBR-203ENST00000441074 GANQ9H2C0 597 aa12.87□□□□□ -0.35
LTBR-203ENST00000441074 LTBP3Q9NS15 1303 aa12.86□□□□□ -0.35
LTBR-203ENST00000441074 TRAF5O00463 557 aa12.86□□□□□ -0.35
LTBR-203ENST00000441074 RGS16O15492 202 aaPredicted RBP12.86□□□□□ -0.35
LTBR-203ENST00000441074 OAS1P00973 400 aaKnown RBP12.86□□□□□ -0.35
LTBR-203ENST00000441074 PDE6CP51160 858 aa12.86□□□□□ -0.35
LTBR-203ENST00000441074 PMS2P54278 862 aa12.86□□□□□ -0.35
LTBR-203ENST00000441074 MARSP56192 900 aaKnown RBP12.86□□□□□ -0.35
LTBR-203ENST00000441074 RWDD2BP57060 319 aa12.86□□□□□ -0.35
LTBR-203ENST00000441074 RRP1BQ14684 758 aaKnown RBP12.86□□□□□ -0.35
LTBR-203ENST00000441074 ENOX2Q16206 610 aaKnown RBP12.86□□□□□ -0.35
LTBR-203ENST00000441074 PPP2R5EQ16537 467 aa12.86□□□□□ -0.35
LTBR-203ENST00000441074 CALCRLQ16602 461 aa12.86□□□□□ -0.35
LTBR-203ENST00000441074 C6orf118Q5T5N4 469 aa12.86□□□□□ -0.35
LTBR-203ENST00000441074 RBM26Q5T8P6 1007 aaKnown RBP12.86□□□□□ -0.35
LTBR-203ENST00000441074 IRF2BP2Q7Z5L9 587 aa12.86□□□□□ -0.35
LTBR-203ENST00000441074 TRIM59Q8IWR1 403 aa12.86□□□□□ -0.35
LTBR-203ENST00000441074 MYOCDQ8IZQ8 938 aa12.86□□□□□ -0.35
LTBR-203ENST00000441074 SYCE1Q8N0S2 351 aa12.86□□□□□ -0.35
LTBR-203ENST00000441074 TBCKQ8TEA7 893 aa12.86□□□□□ -0.35
LTBR-203ENST00000441074 ZDHHC18Q9NUE0 388 aa12.86□□□□□ -0.35
LTBR-203ENST00000441074 ETAA1Q9NY74 926 aa12.86□□□□□ -0.35
LTBR-203ENST00000441074 SERPINA10Q9UK55 444 aa12.86□□□□□ -0.35
LTBR-203ENST00000441074 LMNB1P20700 586 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 SLC16A2P36021 539 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 COPS2P61201 443 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 PTK2Q05397 1052 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 CXCL9Q07325 125 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 BNIP1Q12981 228 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 RBBP5Q15291 538 aaKnown RBP12.85□□□□□ -0.35
LTBR-203ENST00000441074 LRRC41Q15345 812 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 DENND2CQ68D51 928 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 DUPD1Q68J44 220 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 RSBN1LQ6PCB5 846 aaPredicted RBP12.85□□□□□ -0.35
LTBR-203ENST00000441074 ZNF571Q7Z3V5 609 aaPredicted RBP12.85□□□□□ -0.35
LTBR-203ENST00000441074 IFT74Q96LB3 600 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 PNMA5Q96PV4 448 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 MTMR9Q96QG7 549 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 AZI2Q9H6S1 392 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 GPCPD1Q9NPB8 672 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 ARHGEF3Q9NR81 526 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms