RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 BACE1P56817 501 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 SNRPFP62306 86 aaKnown RBP10.01□□□□□ -0.81
HDAC6-209ENST00000440653 KIF5AQ12840 1032 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 MTMR1Q13613 665 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 MTMR2Q13614 643 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 LRRC41Q15345 812 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 GLIPR1L2Q4G1C9 344 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 ZNF569Q5MCW4 686 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 LHX8Q68G74 356 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 C1orf186Q6ZWK4 172 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 MIER3Q7Z3K6 550 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 SRGAP1Q7Z6B7 1085 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 NELFCDQ8IXH7 590 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 CCDC155Q8N6L0 562 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 GPR161Q8N6U8 529 aaKnown RBP10.01□□□□□ -0.81
HDAC6-209ENST00000440653 ZNF280CQ8ND82 737 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 TRIM58Q8NG06 486 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 TMEM174Q8WUU8 243 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 CLEC4DQ8WXI8 215 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 TRIB2Q92519 343 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 GPRASP2Q96D09 838 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 HVCN1Q96D96 273 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 DYDC2Q96IM9 177 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 CDHR1Q96JP9 859 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 PURBQ96QR8 312 aaKnown RBP10.01□□□□□ -0.81
HDAC6-209ENST00000440653 GAS2L1Q99501 681 aaPredicted RBP10.01□□□□□ -0.81
HDAC6-209ENST00000440653 RUSC1Q9BVN2 902 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 UNC45AQ9H3U1 944 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 ZSWIM4Q9H7M6 989 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 JADE2Q9NQC1 790 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 CHD9Q3L8U1 2897 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 LRRC53A6NM62 1247 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 WDR64B1ANS9 1081 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 RBAK-RBAKDNI3L0D1 243 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 NFIBO00712 420 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 FANCGO15287 622 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 MAFGO15525 162 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 CHMP2AO43633 222 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 SLITRK3O94933 977 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 NR3C1P04150 777 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 SERPING1P05155 500 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 ALAS1P13196 640 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 H2AFXP16104 143 aaPredicted RBP10□□□□□ -0.81
HDAC6-209ENST00000440653 TAL1P17542 331 aaPredicted RBP10□□□□□ -0.81
HDAC6-209ENST00000440653 SCP2P22307 547 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 CCND2P30279 289 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 KIF11P52732 1056 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 EPHB4P54760 987 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 CHMP4BP1P59074 171 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 HERVK_113P62684 666 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 ADAM9Q13443 819 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 PPP2R5AQ15172 486 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 CCDC122Q5T0U0 273 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 MAP3K21Q5TCX8 1036 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 SFMBT2Q5VUG0 894 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 RNF207Q6ZRF8 634 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 FAM178BQ8IXR5 827 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 SLC35F6Q8N357 371 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 GLIS3Q8NEA6 775 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 SYTL5Q8TDW5 730 aaPredicted RBP10□□□□□ -0.81
HDAC6-209ENST00000440653 BAP1Q92560 729 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 SECISBP2LQ93073 1101 aaKnown RBP10□□□□□ -0.81
HDAC6-209ENST00000440653 DRC1Q96MC2 740 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 AGBL1Q96MI9 1066 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 IWS1Q96ST2 819 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 PHOX2BQ99453 314 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 LSM14BQ9BX40 385 aaKnown RBP10□□□□□ -0.81
HDAC6-209ENST00000440653 CARD6Q9BX69 1037 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 FGFBP2Q9BYJ0 223 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 IFIH1Q9BYX4 1025 aaKnown RBP10□□□□□ -0.81
HDAC6-209ENST00000440653 MMRN2Q9H8L6 949 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 AGO4Q9HCK5 861 aaKnown RBP10□□□□□ -0.81
HDAC6-209ENST00000440653 KCNH7Q9NS40 1196 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 FAM207AQ9NSI2 230 aaPredicted RBP10□□□□□ -0.81
HDAC6-209ENST00000440653 AGPAT5Q9NUQ2 364 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 LARSQ9P2J5 1176 aaKnown RBP10□□□□□ -0.81
HDAC6-209ENST00000440653 PRKAG2Q9UGJ0 569 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 GJD2Q9UKL4 321 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 REXO2Q9Y3B8 237 aaKnown RBP10□□□□□ -0.81
HDAC6-209ENST00000440653 PCDHB13Q9Y5F0 798 aa10□□□□□ -0.81
HDAC6-209ENST00000440653 BZW2Q9Y6E2 419 aaKnown RBP10□□□□□ -0.81
HDAC6-209ENST00000440653 NPHP3-ACAD11A0A0J9YXS1 232 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 RNF225M0QZC1 329 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-209ENST00000440653 VWA5AO00534 786 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 PJA2O43164 708 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 ATP8B1O43520 1251 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 AKR1B10O60218 316 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 N4BP1O75113 896 aaKnown RBP9.99□□□□□ -0.81
HDAC6-209ENST00000440653 TACC1O75410 805 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 MYBP10242 640 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 PRKAR2AP13861 404 aaKnown RBP9.99□□□□□ -0.81
HDAC6-209ENST00000440653 ITGB5P18084 799 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 PTPRAP18433 802 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 IGFBP4P22692 258 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 CASP5P51878 434 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 RTP1P59025 263 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 PSMC6P62333 389 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 CACNB1Q02641 598 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-209ENST00000440653 CTTNQ14247 550 aaKnown RBP9.99□□□□□ -0.81
HDAC6-209ENST00000440653 PGM5Q15124 567 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms