RNA–Protein interactions for RNA: ENST00000440452.5

PCGF3-207, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 3,609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-207ENST00000440452 EML1O00423 815 aa13.41□□□□□ -0.26
PCGF3-207ENST00000440452 GAS7O60861 476 aa13.41□□□□□ -0.26
PCGF3-207ENST00000440452 RPL13P26373 211 aaKnown RBP13.41□□□□□ -0.26
PCGF3-207ENST00000440452 STAT1P42224 750 aa13.41□□□□□ -0.26
PCGF3-207ENST00000440452 ZFYVE27Q5T4F4 411 aa13.41□□□□□ -0.26
PCGF3-207ENST00000440452 LONP2Q86WA8 852 aa13.41□□□□□ -0.26
PCGF3-207ENST00000440452 FAM178BQ8IXR5 827 aa13.41□□□□□ -0.26
PCGF3-207ENST00000440452 LMNTD2Q8IXW0 634 aa13.41□□□□□ -0.26
PCGF3-207ENST00000440452 SLFN12Q8IYM2 578 aa13.41□□□□□ -0.26
PCGF3-207ENST00000440452 CCDC26Q8TAB7 109 aa13.41□□□□□ -0.26
PCGF3-207ENST00000440452 PRMT1Q99873 361 aaKnown RBP13.41□□□□□ -0.26
PCGF3-207ENST00000440452 ECT2Q9H8V3 914 aa13.41□□□□□ -0.26
PCGF3-207ENST00000440452 TSKSQ9UJT2 592 aa13.41□□□□□ -0.26
PCGF3-207ENST00000440452 BCORQ6W2J9 1755 aa13.41□□□□□ -0.26
PCGF3-207ENST00000440452 DOCK2Q92608 1830 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 IGF2BP3O00425 579 aaKnown RBP eCLIP13.4□□□□□ -0.26
PCGF3-207ENST00000440452 KIF3CO14782 793 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 SART1O43290 800 aaKnown RBP13.4□□□□□ -0.26
PCGF3-207ENST00000440452 GNA14O95837 355 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 KCNJ2P63252 427 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 GIT2Q14161 759 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 NUGGCQ68CJ6 796 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 BZW1Q7L1Q6 419 aaKnown RBP13.4□□□□□ -0.26
PCGF3-207ENST00000440452 YTHDF3Q7Z739 585 aaKnown RBP13.4□□□□□ -0.26
PCGF3-207ENST00000440452 HOOK3Q86VS8 718 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 FAM228AQ86W67 206 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 EIF2AK1Q9BQI3 630 aaKnown RBP13.4□□□□□ -0.26
PCGF3-207ENST00000440452 TMOD4Q9NZQ9 345 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 C15orf41Q9Y2V0 281 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 ERFP50548 548 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 MTMR3Q13615 1198 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 NAB2Q15742 525 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 APOBEC3HQ6NTF7 200 aaKnown RBP13.4□□□□□ -0.26
PCGF3-207ENST00000440452 SLC30A9Q6PML9 568 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 LRRC34Q8IZ02 419 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 IFT74Q96LB3 600 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 XPO6Q96QU8 1125 aaKnown RBP13.4□□□□□ -0.26
PCGF3-207ENST00000440452 TRIM51Q9BSJ1 452 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 CNOT8Q9UFF9 292 aaKnown RBP13.4□□□□□ -0.26
PCGF3-207ENST00000440452 SSU72P8A0A1W2PR75 194 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 GOLGA8IPA6NC78 632 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 GOLGA8JA6NMD2 632 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 TTI1O43156 1089 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 TRAPPC3O43617 180 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 FGGP02679 453 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 BMP3P12645 472 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 ERVK-9P63128 1117 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 CCDC127Q96BQ5 260 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 MRRFQ96E11 262 aaKnown RBP13.4□□□□□ -0.26
PCGF3-207ENST00000440452 P2RX7Q99572 595 aaKnown RBP13.4□□□□□ -0.26
PCGF3-207ENST00000440452 AZI2Q9H6S1 392 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 DNAJC17Q9NVM6 304 aaKnown RBP13.4□□□□□ -0.26
PCGF3-207ENST00000440452 PI4KBQ9UBF8 816 aa13.4□□□□□ -0.26
PCGF3-207ENST00000440452 ROBO3Q96MS0 1386 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 A8MUI8 341 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 TISP43B9A030 160 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 MSH4O15457 936 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 TNFAIP3P21580 790 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 PON1P27169 355 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 ZNF844Q08AG5 666 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 AOC3Q16853 763 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 SYDE2Q5VT97 1194 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 CTNNBL1Q8WYA6 563 aaPredicted RBP13.39□□□□□ -0.27
PCGF3-207ENST00000440452 PURBQ96QR8 312 aaKnown RBP13.39□□□□□ -0.27
PCGF3-207ENST00000440452 DDX23Q9BUQ8 820 aaKnown RBP13.39□□□□□ -0.27
PCGF3-207ENST00000440452 NUCKS1Q9H1E3 243 aaKnown RBP13.39□□□□□ -0.27
PCGF3-207ENST00000440452 DNAJC18Q9H819 358 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 AJAP1Q9UKB5 411 aaPredicted RBP13.39□□□□□ -0.27
PCGF3-207ENST00000440452 FRMD4BQ9Y2L6 1034 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 PTPN22Q9Y2R2 807 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 hCG_1984214I3L0E3 225 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 CHRNA5P30532 468 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 CTCFP49711 727 aaPredicted RBP13.39□□□□□ -0.27
PCGF3-207ENST00000440452 ZNF713Q8N859 430 aaPredicted RBP13.39□□□□□ -0.27
PCGF3-207ENST00000440452 ZNF483Q8TF39 744 aaPredicted RBP13.39□□□□□ -0.27
PCGF3-207ENST00000440452 CEP63Q96MT8 703 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 CTTNBP2NLQ9P2B4 639 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 NAGPAQ9UK23 515 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 NOC2LQ9Y3T9 749 aaKnown RBP13.39□□□□□ -0.27
PCGF3-207ENST00000440452 PLCH1Q4KWH8 1693 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 MEIS2O14770 477 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 RAD17O75943 681 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 UBOX5O94941 541 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 CDK17Q00537 523 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 GABPAQ06546 454 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 TRIM4Q9C037 500 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.39□□□□□ -0.278e-11■■■■■ 43
PCGF3-207ENST00000440452 ABCF3Q9NUQ8 709 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 DNAJC12Q9UKB3 198 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 SNX24Q9Y343 169 aa13.39□□□□□ -0.27
PCGF3-207ENST00000440452 COL14A1Q05707 1796 aaKnown RBP13.39□□□□□ -0.27
PCGF3-207ENST00000440452 GNAT1P11488 350 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 POLD1P28340 1107 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 GJC1P36383 396 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 BIRC3Q13489 604 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 WLSQ5T9L3 541 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 INTS8Q75QN2 995 aaKnown RBP13.38□□□□□ -0.27
PCGF3-207ENST00000440452 TRPM8Q7Z2W7 1104 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 RNF10Q8N5U6 811 aaKnown RBP13.38□□□□□ -0.27
PCGF3-207ENST00000440452 METTL13Q8N6R0 699 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms