RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 SELENOOQ9BVL4 669 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 LACRTQ9GZZ8 138 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 FRMD4BQ9Y2L6 1034 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 SNCAIPQ9Y6H5 919 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 FAM169AQ9Y6X4 670 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 GOLGA6CA6NDK9 693 aa15.42■□□□□ 0.06
LIMD1-202ENST00000440097 GOLGA6DP0CG33 693 aa15.42■□□□□ 0.06
LIMD1-202ENST00000440097 ACTN1P12814 892 aa15.42■□□□□ 0.06
LIMD1-202ENST00000440097 NPEPPSP55786 919 aa15.42■□□□□ 0.06
LIMD1-202ENST00000440097 PSMC5P62195 406 aa15.42■□□□□ 0.06
LIMD1-202ENST00000440097 EXOC3L4Q17RC7 722 aa15.42■□□□□ 0.06
LIMD1-202ENST00000440097 ZNF526Q8TF50 670 aaPredicted RBP15.42■□□□□ 0.06
LIMD1-202ENST00000440097 SPAG5Q96R06 1193 aa15.42■□□□□ 0.06
LIMD1-202ENST00000440097 ELP3Q9H9T3 547 aa15.42■□□□□ 0.06
LIMD1-202ENST00000440097 GOLGA6AQ9NYA3 693 aa15.42■□□□□ 0.06
LIMD1-202ENST00000440097 PHIPQ8WWQ0 1821 aa15.42■□□□□ 0.06
LIMD1-202ENST00000440097 TARSL2A2RTX5 802 aaKnown RBP15.42■□□□□ 0.06
LIMD1-202ENST00000440097 ZNF263O14978 683 aa15.42■□□□□ 0.06
LIMD1-202ENST00000440097 SLC9A1P19634 815 aa15.42■□□□□ 0.06
LIMD1-202ENST00000440097 SFNP31947 248 aa15.42■□□□□ 0.06
LIMD1-202ENST00000440097 PSMC2P35998 433 aaKnown RBP15.42■□□□□ 0.06
LIMD1-202ENST00000440097 ZNF131P52739 623 aa15.42■□□□□ 0.06
LIMD1-202ENST00000440097 SLC9C1Q4G0N8 1177 aa15.42■□□□□ 0.06
LIMD1-202ENST00000440097 NOL9Q5SY16 702 aaKnown RBP15.42■□□□□ 0.06
LIMD1-202ENST00000440097 FAM102BQ5T8I3 360 aa15.42■□□□□ 0.06
LIMD1-202ENST00000440097 ZC3H3Q8IXZ2 948 aaKnown RBP15.42■□□□□ 0.06
LIMD1-202ENST00000440097 DAW1Q8N136 415 aa15.42■□□□□ 0.06
LIMD1-202ENST00000440097 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.42■□□□□ 0.06
LIMD1-202ENST00000440097 GPRC5CQ9NQ84 441 aa15.42■□□□□ 0.06
LIMD1-202ENST00000440097 EBAG9O00559 213 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 EXOC3O60645 756 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 CDK17Q00537 523 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 SWT1Q5T5J6 900 aaKnown RBP15.41■□□□□ 0.06
LIMD1-202ENST00000440097 C9orf131Q5VYM1 1079 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 PAGR1Q9BTK6 254 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 ZMYM2Q9UBW7 1377 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 COL11A1P12107 1806 aaPredicted RBP15.41■□□□□ 0.06
LIMD1-202ENST00000440097 BACH1O14867 736 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 NOL4O94818 638 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 HNRNPH3P31942 346 aaKnown RBP15.41■□□□□ 0.06
LIMD1-202ENST00000440097 XRRA1Q6P2D8 792 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 FAM133AQ8N9E0 248 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 GPRASP2Q96D09 838 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 HINFPQ9BQA5 517 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 NUCKS1Q9H1E3 243 aaKnown RBP15.41■□□□□ 0.06
LIMD1-202ENST00000440097 AGPAT3Q9NRZ7 376 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 GABBR1Q9UBS5 961 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 ADAMTS5Q9UNA0 930 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 PCDHA10Q9Y5I2 948 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 GOLGA6BA6NDN3 693 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 SLC16A3O15427 465 aaKnown RBP15.41■□□□□ 0.06
LIMD1-202ENST00000440097 IREB2P48200 963 aaKnown RBP15.41■□□□□ 0.06
LIMD1-202ENST00000440097 PEX3P56589 373 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 GFPT1Q06210 699 aaPredicted RBP15.41■□□□□ 0.06
LIMD1-202ENST00000440097 MAPK7Q13164 816 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 GNPTABQ3T906 1256 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 CCNI2Q6ZMN8 369 aaPredicted RBP15.41■□□□□ 0.06
LIMD1-202ENST00000440097 EHBP1Q8NDI1 1231 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 FIZ1Q96SL8 496 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 MOV10L1Q9BXT6 1211 aaKnown RBP15.41■□□□□ 0.06
LIMD1-202ENST00000440097 EDEM3Q9BZQ6 932 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 GCNT4Q9P109 453 aa15.41■□□□□ 0.06
LIMD1-202ENST00000440097 DBR1Q9UK59 544 aaKnown RBP15.41■□□□□ 0.06
LIMD1-202ENST00000440097 MYH11P35749 1972 aa15.4■□□□□ 0.06
LIMD1-202ENST00000440097 CCDC169A6NNP5 214 aa15.4■□□□□ 0.06
LIMD1-202ENST00000440097 NF2P35240 595 aa15.4■□□□□ 0.06
LIMD1-202ENST00000440097 VAV2P52735 878 aa15.4■□□□□ 0.06
LIMD1-202ENST00000440097 NAP1L1P55209 391 aaKnown RBP15.4■□□□□ 0.06
LIMD1-202ENST00000440097 PAPD7Q5XG87 772 aaKnown RBP15.4■□□□□ 0.06
LIMD1-202ENST00000440097 FBXW10Q5XX13 1052 aa15.4■□□□□ 0.06
LIMD1-202ENST00000440097 GBP6Q6ZN66 633 aa15.4■□□□□ 0.06
LIMD1-202ENST00000440097 MOB2Q70IA6 237 aa15.4■□□□□ 0.06
LIMD1-202ENST00000440097 NCAPG2Q86XI2 1143 aa15.4■□□□□ 0.06
LIMD1-202ENST00000440097 C4orf19Q8IY42 314 aa15.4■□□□□ 0.06
LIMD1-202ENST00000440097 CAGE1Q8TC20 777 aa15.4■□□□□ 0.06
LIMD1-202ENST00000440097 CEP89Q96ST8 783 aa15.4■□□□□ 0.06
LIMD1-202ENST00000440097 PCIF1Q9H4Z3 704 aa15.4■□□□□ 0.06
LIMD1-202ENST00000440097 JPH1Q9HDC5 661 aaPredicted RBP15.4■□□□□ 0.06
LIMD1-202ENST00000440097 PCDHA13Q9Y5I0 950 aa15.4■□□□□ 0.06
LIMD1-202ENST00000440097 RBBP6Q7Z6E9 1792 aaKnown RBP15.4■□□□□ 0.06
LIMD1-202ENST00000440097 IRF6O14896 467 aa15.4■□□□□ 0.06
LIMD1-202ENST00000440097 CKAP4Q07065 602 aaKnown RBP15.4■□□□□ 0.06
LIMD1-202ENST00000440097 KLHL30Q0D2K2 578 aa15.4■□□□□ 0.06
LIMD1-202ENST00000440097 DPY19L2Q6NUT2 758 aa15.4■□□□□ 0.06
LIMD1-202ENST00000440097 SWSAP1Q6NVH7 229 aa15.4■□□□□ 0.06
LIMD1-202ENST00000440097 CCDC91Q7Z6B0 441 aa15.4■□□□□ 0.06
LIMD1-202ENST00000440097 BCAS4Q8TDM0 211 aa15.4■□□□□ 0.06
LIMD1-202ENST00000440097 SLC35C1Q96A29 364 aa15.4■□□□□ 0.06
LIMD1-202ENST00000440097 CEP170P1Q96L14 293 aa15.4■□□□□ 0.06
LIMD1-202ENST00000440097 INPP4AQ96PE3 977 aaPredicted RBP15.4■□□□□ 0.06
LIMD1-202ENST00000440097 ZNF185O15231 689 aa15.39■□□□□ 0.05
LIMD1-202ENST00000440097 PLS3P13797 630 aa15.39■□□□□ 0.05
LIMD1-202ENST00000440097 HNRNPH1P31943 449 aaKnown RBP15.39■□□□□ 0.05
LIMD1-202ENST00000440097 MAGEA1P43355 309 aa15.39■□□□□ 0.05
LIMD1-202ENST00000440097 CNTN2Q02246 1040 aa15.39■□□□□ 0.05
LIMD1-202ENST00000440097 PPFIA1Q13136 1202 aa15.39■□□□□ 0.05
LIMD1-202ENST00000440097 ANKRD13CQ8N6S4 541 aa15.39■□□□□ 0.05
LIMD1-202ENST00000440097 SECISBP2LQ93073 1101 aaKnown RBP15.39■□□□□ 0.05
LIMD1-202ENST00000440097 CLMNQ96JQ2 1002 aa15.39■□□□□ 0.05
LIMD1-202ENST00000440097 CAPS2Q9BXY5 557 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms