RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 ADGRL3Q9HAR2 1447 aa12.38□□□□□ -0.43
CCBE1-202ENST00000439986 WDR91A4D1P6 747 aa12.38□□□□□ -0.43
CCBE1-202ENST00000439986 RNASELQ05823 741 aaKnown RBP12.38□□□□□ -0.43
CCBE1-202ENST00000439986 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.38□□□□□ -0.43
CCBE1-202ENST00000439986 HABP4Q5JVS0 413 aaKnown RBP12.38□□□□□ -0.43
CCBE1-202ENST00000439986 SLFN12Q8IYM2 578 aa12.38□□□□□ -0.43
CCBE1-202ENST00000439986 SPZ1Q9BXG8 430 aa12.38□□□□□ -0.43
CCBE1-202ENST00000439986 RWDD3Q9Y3V2 267 aa12.38□□□□□ -0.43
CCBE1-202ENST00000439986 LMTK2Q8IWU2 1503 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 A0A0G2JLW4 131 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 SNAP23O00161 211 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 GNGT2O14610 69 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 MGEA5O60502 916 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 MARSP56192 900 aaKnown RBP12.37□□□□□ -0.43
CCBE1-202ENST00000439986 TMED2Q15363 201 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 CHP1Q99653 195 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 A8MXQ7 604 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 S100A9P06702 114 aaKnown RBP12.37□□□□□ -0.43
CCBE1-202ENST00000439986 GARSP41250 739 aaKnown RBP12.37□□□□□ -0.43
CCBE1-202ENST00000439986 FOXO4P98177 505 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 PABPC4Q13310 644 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCBE1-202ENST00000439986 IQCF2Q8IXL9 164 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 C7orf31Q8N865 590 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 GDAP1Q8TB36 358 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 NLRP7Q8WX94 980 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 OSBPL9Q96SU4 736 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 ZNF277Q9NRM2 450 aaPredicted RBP12.37□□□□□ -0.43
CCBE1-202ENST00000439986 ADD3Q9UEY8 706 aaKnown RBP12.37□□□□□ -0.43
CCBE1-202ENST00000439986 PHEXP78562 749 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 ENAHQ8N8S7 591 aaPredicted RBP12.37□□□□□ -0.43
CCBE1-202ENST00000439986 SPDYE1Q8NFV5 336 aaPredicted RBP12.37□□□□□ -0.43
CCBE1-202ENST00000439986 TBK1Q9UHD2 729 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 KCNG1Q9UIX4 513 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 LRRC53A6NM62 1247 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 NCK2O43639 380 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 PALMO75781 387 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 KRT14P02533 472 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 TMED10P49755 219 aaKnown RBP12.37□□□□□ -0.43
CCBE1-202ENST00000439986 ABCB5Q2M3G0 1257 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 AXIN2Q9Y2T1 843 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 ANKARQ7Z5J8 1434 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 PASKQ96RG2 1323 aa12.37□□□□□ -0.43
CCBE1-202ENST00000439986 PPRC1Q5VV67 1664 aaKnown RBP12.37□□□□□ -0.43
CCBE1-202ENST00000439986 KRT6AP02538 564 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 KRT6BP04259 564 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 MAPK1P28482 360 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 SLCO1A2P46721 670 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 KRT6CP48668 564 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 LRRC63Q05C16 580 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 FAM133BQ5BKY9 247 aaKnown RBP12.36□□□□□ -0.43
CCBE1-202ENST00000439986 CCHCR1Q8TD31 782 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 LRRC8CQ8TDW0 803 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 RUNDC3BQ96NL0 473 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 ZNF577Q9BSK1 485 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 CNOT10Q9H9A5 744 aaKnown RBP12.36□□□□□ -0.43
CCBE1-202ENST00000439986 DBNDD1Q9H9R9 158 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 TSR3Q9UJK0 312 aaKnown RBP12.36□□□□□ -0.43
CCBE1-202ENST00000439986 TARSL2A2RTX5 802 aaKnown RBP12.36□□□□□ -0.43
CCBE1-202ENST00000439986 AFPP02771 609 aaKnown RBP12.36□□□□□ -0.43
CCBE1-202ENST00000439986 CAPN1P07384 714 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 SLFN13Q68D06 897 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 RIN2Q8WYP3 895 aaPredicted RBP12.36□□□□□ -0.43
CCBE1-202ENST00000439986 F5H423 210 aaPredicted RBP12.36□□□□□ -0.43
CCBE1-202ENST00000439986 AASDHPPTQ9NRN7 309 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 KIAA1210Q9ULL0 1709 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 GSTA4O15217 222 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 SNUPNO95149 360 aaKnown RBP12.36□□□□□ -0.43
CCBE1-202ENST00000439986 NSFP46459 744 aaKnown RBP12.36□□□□□ -0.43
CCBE1-202ENST00000439986 ANTXR2P58335 489 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 PDE1BQ01064 536 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 FAM160B1Q5W0V3 765 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 USP49Q70CQ1 688 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 SDCCAG3Q96C92 435 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 CNDP2Q96KP4 475 aaKnown RBP12.36□□□□□ -0.43
CCBE1-202ENST00000439986 HACD3Q9P035 362 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 IPO11Q9UI26 975 aaKnown RBP12.36□□□□□ -0.43
CCBE1-202ENST00000439986 CPS1P31327 1500 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 CHUKO15111 745 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 CD58P19256 250 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 GUCY2CP25092 1073 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 PEX5P50542 639 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 ITPRIPL1Q6GPH6 555 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 DPY19L2Q6NUT2 758 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 MIGA2Q7L4E1 593 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 MYO1HQ8N1T3 1032 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 SYNE4Q8N205 404 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 FAM149B1Q96BN6 582 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 KLHL29Q96CT2 875 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 PIGSQ96S52 555 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 FMO2Q99518 471 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 VIPAS39Q9H9C1 493 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 PSD3Q9NYI0 1048 aa12.36□□□□□ -0.43
CCBE1-202ENST00000439986 SYNDIG1LA6NDD5 238 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 HNRNPDLO14979 420 aaKnown RBP12.35□□□□□ -0.43
CCBE1-202ENST00000439986 ARHGEF9O43307 516 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 GFPT1Q06210 699 aaPredicted RBP12.35□□□□□ -0.43
CCBE1-202ENST00000439986 ST3GAL1Q11201 340 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 WASHC5Q12768 1159 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 NEK9Q8TD19 979 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 GANCQ8TET4 914 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms