RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 KIF5CO60282 957 aa16.46■□□□□ 0.23
CPSF7-205ENST00000439958 NDUFA10O95299 355 aa16.46■□□□□ 0.23
CPSF7-205ENST00000439958 ABL1P00519 1130 aa16.46■□□□□ 0.23
CPSF7-205ENST00000439958 ZNF286BP0CG31 522 aa16.46■□□□□ 0.23
CPSF7-205ENST00000439958 CYP2B6P20813 491 aa16.46■□□□□ 0.23
CPSF7-205ENST00000439958 DRP2Q13474 957 aa16.46■□□□□ 0.23
CPSF7-205ENST00000439958 SEZ6Q53EL9 994 aa16.46■□□□□ 0.23
CPSF7-205ENST00000439958 LMBRD2Q68DH5 695 aaPredicted RBP16.46■□□□□ 0.23
CPSF7-205ENST00000439958 KCTD17Q8N5Z5 321 aa16.46■□□□□ 0.23
CPSF7-205ENST00000439958 KIFAP3Q92845 792 aa16.46■□□□□ 0.23
CPSF7-205ENST00000439958 METTL14Q9HCE5 456 aaKnown RBP16.46■□□□□ 0.23
CPSF7-205ENST00000439958 MCM3APO60318 1980 aa16.46■□□□□ 0.22
CPSF7-205ENST00000439958 RASSF10A6NK89 507 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 CSDE1O75534 798 aaKnown RBP16.45■□□□□ 0.22
CPSF7-205ENST00000439958 CYLC1P35663 651 aaPredicted RBP16.45■□□□□ 0.22
CPSF7-205ENST00000439958 KCNMA1Q12791 1236 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 GPR142Q7Z601 462 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 HSPBP1Q9NZL4 362 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 SIK3Q9Y2K2 1263 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 RLFQ13129 1914 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 NFASCO94856 1347 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 LRRN2O75325 713 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 ATP4AP20648 1035 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 CCDC122Q5T0U0 273 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 CHADLQ6NUI6 762 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 CDR2LQ86X02 465 aaPredicted RBP16.45■□□□□ 0.22
CPSF7-205ENST00000439958 SCFD2Q8WU76 684 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 SENP7Q9BQF6 1050 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 XPNPEP1Q9NQW7 623 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 FAM184BQ9ULE4 1060 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 TBX20Q9UMR3 447 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 BRCA2P51587 3418 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 ASB14A6NK59 587 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 ANKRD63C9JTQ0 380 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 CNGA1P29973 690 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 CASQ1P31415 396 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 EIF4A3P38919 411 aaKnown RBP16.45■□□□□ 0.22
CPSF7-205ENST00000439958 DLG4P78352 724 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 GBP6Q6ZN66 633 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 FRMD5Q7Z6J6 570 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 CBWD2Q8IUF1 395 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 REXO1L1PQ8IX06 675 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 WDR24Q96S15 920 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 POP1Q99575 1024 aaKnown RBP16.45■□□□□ 0.22
CPSF7-205ENST00000439958 FAM213AQ9BRX8 229 aa16.45■□□□□ 0.22
CPSF7-205ENST00000439958 LYPLA2O95372 231 aa16.44■□□□□ 0.22
CPSF7-205ENST00000439958 COPB2P35606 906 aa16.44■□□□□ 0.22
CPSF7-205ENST00000439958 ETF1P62495 437 aaKnown RBP16.44■□□□□ 0.22
CPSF7-205ENST00000439958 SFMBT2Q5VUG0 894 aa16.44■□□□□ 0.22
CPSF7-205ENST00000439958 RHPN2Q8IUC4 686 aa16.44■□□□□ 0.22
CPSF7-205ENST00000439958 XXYLT1Q8NBI6 393 aa16.44■□□□□ 0.22
CPSF7-205ENST00000439958 AFG1LQ8WV93 481 aa16.44■□□□□ 0.22
CPSF7-205ENST00000439958 GPBP1L1Q9HC44 474 aaPredicted RBP16.44■□□□□ 0.22
CPSF7-205ENST00000439958 EXOC7Q9UPT5 735 aa16.44■□□□□ 0.22
CPSF7-205ENST00000439958 K7ERI5 159 aa16.44■□□□□ 0.22
CPSF7-205ENST00000439958 WDR59Q6PJI9 974 aa16.44■□□□□ 0.22
CPSF7-205ENST00000439958 RETREG2Q8NC44 543 aa16.44■□□□□ 0.22
CPSF7-205ENST00000439958 SLC35C1Q96A29 364 aa16.44■□□□□ 0.22
CPSF7-205ENST00000439958 FHOD1Q9Y613 1164 aa16.44■□□□□ 0.22
CPSF7-205ENST00000439958 ADGRA3Q8IWK6 1321 aa16.44■□□□□ 0.22
CPSF7-205ENST00000439958 GCLCP48506 637 aaPredicted RBP16.44■□□□□ 0.22
CPSF7-205ENST00000439958 ZBTB33Q86T24 672 aa16.44■□□□□ 0.22
CPSF7-205ENST00000439958 DNAAF5Q86Y56 855 aa16.44■□□□□ 0.22
CPSF7-205ENST00000439958 GOLGA5Q8TBA6 731 aa16.44■□□□□ 0.22
CPSF7-205ENST00000439958 LENG1Q96BZ8 264 aaPredicted RBP16.44■□□□□ 0.22
CPSF7-205ENST00000439958 FGD4Q96M96 766 aa16.44■□□□□ 0.22
CPSF7-205ENST00000439958 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.44■□□□□ 0.22
CPSF7-205ENST00000439958 PAXBP1Q9Y5B6 917 aa16.44■□□□□ 0.22
CPSF7-205ENST00000439958 ACOT2P49753 483 aa16.43■□□□□ 0.22
CPSF7-205ENST00000439958 OSTNP61366 133 aa16.43■□□□□ 0.22
CPSF7-205ENST00000439958 MYL7Q01449 175 aa16.43■□□□□ 0.22
CPSF7-205ENST00000439958 KLHL30Q0D2K2 578 aa16.43■□□□□ 0.22
CPSF7-205ENST00000439958 BMT2Q1RMZ1 405 aa16.43■□□□□ 0.22
CPSF7-205ENST00000439958 CELF3Q5SZQ8 465 aaKnown RBP16.43■□□□□ 0.22
CPSF7-205ENST00000439958 NYAP1Q6ZVC0 841 aa16.43■□□□□ 0.22
CPSF7-205ENST00000439958 TMEM161BQ8NDZ6 487 aa16.43■□□□□ 0.22
CPSF7-205ENST00000439958 IGF2BP3O00425 579 aaKnown RBP eCLIP16.43■□□□□ 0.22
CPSF7-205ENST00000439958 TGFB3P10600 412 aa16.43■□□□□ 0.22
CPSF7-205ENST00000439958 CLCN3P51790 818 aa16.43■□□□□ 0.22
CPSF7-205ENST00000439958 FKBP1BP68106 108 aa16.43■□□□□ 0.22
CPSF7-205ENST00000439958 MAP2K1Q02750 393 aaPredicted RBP16.43■□□□□ 0.22
CPSF7-205ENST00000439958 ASAP3Q8TDY4 903 aa16.43■□□□□ 0.22
CPSF7-205ENST00000439958 EMSYQ7Z589 1322 aa16.43■□□□□ 0.22
CPSF7-205ENST00000439958 PTPRFP10586 1907 aa16.43■□□□□ 0.22
CPSF7-205ENST00000439958 MYH11P35749 1972 aa16.43■□□□□ 0.22
CPSF7-205ENST00000439958 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.42■□□□□ 0.22
CPSF7-205ENST00000439958 INO80B-WBP1J3KQ70 363 aa16.42■□□□□ 0.22
CPSF7-205ENST00000439958 NAA30Q147X3 362 aaPredicted RBP16.42■□□□□ 0.22
CPSF7-205ENST00000439958 CBWD6Q4V339 395 aa16.42■□□□□ 0.22
CPSF7-205ENST00000439958 CBWD3Q5JTY5 395 aa16.42■□□□□ 0.22
CPSF7-205ENST00000439958 CBWD5Q5RIA9 395 aa16.42■□□□□ 0.22
CPSF7-205ENST00000439958 PLEKHH3Q7Z736 793 aa16.42■□□□□ 0.22
CPSF7-205ENST00000439958 RNF149Q8NC42 400 aa16.42■□□□□ 0.22
CPSF7-205ENST00000439958 PCYT2Q99447 389 aa16.42■□□□□ 0.22
CPSF7-205ENST00000439958 INO80BQ9C086 356 aaPredicted RBP16.42■□□□□ 0.22
CPSF7-205ENST00000439958 TMCO5BA8MYB1 307 aa16.42■□□□□ 0.22
CPSF7-205ENST00000439958 EDNRBP24530 442 aa16.42■□□□□ 0.22
CPSF7-205ENST00000439958 ICAM3P32942 547 aa16.42■□□□□ 0.22
CPSF7-205ENST00000439958 GFPT1Q06210 699 aaPredicted RBP16.42■□□□□ 0.22
CPSF7-205ENST00000439958 PRPF31Q8WWY3 499 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms