RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 C11orf57Q6ZUT1 292 aaPredicted RBP22.84■■□□□ 1.25
CHD3-204ENST00000439235 MYOCDQ8IZQ8 938 aa22.84■■□□□ 1.25
CHD3-204ENST00000439235 GUF1Q8N442 669 aaKnown RBP22.84■■□□□ 1.25
CHD3-204ENST00000439235 DEPTORQ8TB45 409 aa22.84■■□□□ 1.25
CHD3-204ENST00000439235 PPP1R13LQ8WUF5 828 aa22.84■■□□□ 1.25
CHD3-204ENST00000439235 PRPF31Q8WWY3 499 aaKnown RBP22.84■■□□□ 1.25
CHD3-204ENST00000439235 BSNDQ8WZ55 320 aa22.84■■□□□ 1.25
CHD3-204ENST00000439235 ZBTB10Q96DT7 871 aa22.84■■□□□ 1.25
CHD3-204ENST00000439235 ST6GALNAC4Q9H4F1 302 aa22.84■■□□□ 1.25
CHD3-204ENST00000439235 KMT5AQ9NQR1 393 aa22.84■■□□□ 1.25
CHD3-204ENST00000439235 PSMA7O14818 248 aa22.83■■□□□ 1.25
CHD3-204ENST00000439235 RPLP2P05387 115 aaKnown RBP22.83■■□□□ 1.25
CHD3-204ENST00000439235 PRCPP42785 496 aa22.83■■□□□ 1.25
CHD3-204ENST00000439235 GJA8P48165 433 aa22.83■■□□□ 1.25
CHD3-204ENST00000439235 TAF2Q6P1X5 1199 aa22.83■■□□□ 1.25
CHD3-204ENST00000439235 ZNF720Q7Z2F6 126 aa22.83■■□□□ 1.25
CHD3-204ENST00000439235 ADSSL1Q8N142 457 aa22.83■■□□□ 1.25
CHD3-204ENST00000439235 HVCN1Q96D96 273 aa22.83■■□□□ 1.25
CHD3-204ENST00000439235 FIZ1Q96SL8 496 aa22.83■■□□□ 1.25
CHD3-204ENST00000439235 NTPCRQ9BSD7 190 aaKnown RBP22.83■■□□□ 1.25
CHD3-204ENST00000439235 TMEM106CQ9BVX2 250 aa22.83■■□□□ 1.25
CHD3-204ENST00000439235 AKT3Q9Y243 479 aa22.83■■□□□ 1.25
CHD3-204ENST00000439235 PCDHB13Q9Y5F0 798 aa22.83■■□□□ 1.25
CHD3-204ENST00000439235 GRIN2DO15399 1336 aa22.82■■□□□ 1.24
CHD3-204ENST00000439235 LRRIQ4A6NIV6 560 aa22.82■■□□□ 1.24
CHD3-204ENST00000439235 PPP1R3GB7ZBB8 358 aa22.82■■□□□ 1.24
CHD3-204ENST00000439235 TREHO43280 583 aa22.82■■□□□ 1.24
CHD3-204ENST00000439235 ERCC5P28715 1186 aaPredicted RBP22.82■■□□□ 1.24
CHD3-204ENST00000439235 NMT1P30419 496 aaKnown RBP22.82■■□□□ 1.24
CHD3-204ENST00000439235 LAMTOR4Q0VGL1 99 aa22.82■■□□□ 1.24
CHD3-204ENST00000439235 CAPSQ13938 189 aa22.82■■□□□ 1.24
CHD3-204ENST00000439235 HIC1Q14526 733 aa22.82■■□□□ 1.24
CHD3-204ENST00000439235 L1TD1Q5T7N2 865 aaKnown RBP22.82■■□□□ 1.24
CHD3-204ENST00000439235 EPM2AIP1Q7L775 607 aaPredicted RBP22.82■■□□□ 1.24
CHD3-204ENST00000439235 RHPN2Q8IUC4 686 aa22.82■■□□□ 1.24
CHD3-204ENST00000439235 ANKLE1Q8NAG6 615 aa22.82■■□□□ 1.24
CHD3-204ENST00000439235 DHTKD1Q96HY7 919 aaPredicted RBP22.82■■□□□ 1.24
CHD3-204ENST00000439235 BPIFA3Q9BQP9 254 aa22.82■■□□□ 1.24
CHD3-204ENST00000439235 FGFBP2Q9BYJ0 223 aa22.82■■□□□ 1.24
CHD3-204ENST00000439235 MAPK8IP1Q9UQF2 711 aa22.82■■□□□ 1.24
CHD3-204ENST00000439235 PHLPP2Q6ZVD8 1323 aa22.82■■□□□ 1.24
CHD3-204ENST00000439235 SLC16A4O15374 487 aa22.81■■□□□ 1.24
CHD3-204ENST00000439235 MYBP10242 640 aa22.81■■□□□ 1.24
CHD3-204ENST00000439235 CD44P16070 742 aaKnown RBP22.81■■□□□ 1.24
CHD3-204ENST00000439235 ZNF165P49910 485 aa22.81■■□□□ 1.24
CHD3-204ENST00000439235 ZNF200P98182 395 aaPredicted RBP22.81■■□□□ 1.24
CHD3-204ENST00000439235 CDC42EP1Q00587 391 aa22.81■■□□□ 1.24
CHD3-204ENST00000439235 PAK1Q13153 545 aa22.81■■□□□ 1.24
CHD3-204ENST00000439235 BMT2Q1RMZ1 405 aa22.81■■□□□ 1.24
CHD3-204ENST00000439235 KLHL10Q6JEL2 608 aa22.81■■□□□ 1.24
CHD3-204ENST00000439235 GDF6Q6KF10 455 aaPredicted RBP22.81■■□□□ 1.24
CHD3-204ENST00000439235 HAUS6Q7Z4H7 955 aa22.81■■□□□ 1.24
CHD3-204ENST00000439235 ZBTB8OSQ8IWT0 167 aa22.81■■□□□ 1.24
CHD3-204ENST00000439235 ZNF710Q8N1W2 664 aa22.81■■□□□ 1.24
CHD3-204ENST00000439235 SLC43A3Q8NBI5 491 aa22.81■■□□□ 1.24
CHD3-204ENST00000439235 GLIS3Q8NEA6 775 aa22.81■■□□□ 1.24
CHD3-204ENST00000439235 FAM49AQ9H0Q0 323 aaPredicted RBP22.81■■□□□ 1.24
CHD3-204ENST00000439235 C2orf40Q9H1Z8 148 aa22.81■■□□□ 1.24
CHD3-204ENST00000439235 CASP5P51878 434 aa22.8■■□□□ 1.24
CHD3-204ENST00000439235 POU5F1BQ06416 359 aa22.8■■□□□ 1.24
CHD3-204ENST00000439235 RUFY4Q6ZNE9 571 aa22.8■■□□□ 1.24
CHD3-204ENST00000439235 KIAA0319LQ8IZA0 1049 aa22.8■■□□□ 1.24
CHD3-204ENST00000439235 RNF149Q8NC42 400 aa22.8■■□□□ 1.24
CHD3-204ENST00000439235 TMEM161BQ8NDZ6 487 aa22.8■■□□□ 1.24
CHD3-204ENST00000439235 FAM200AQ8TCP9 573 aa22.8■■□□□ 1.24
CHD3-204ENST00000439235 SCFD1Q8WVM8 642 aa22.8■■□□□ 1.24
CHD3-204ENST00000439235 KCNN1Q92952 543 aa22.8■■□□□ 1.24
CHD3-204ENST00000439235 NLRP4Q96MN2 994 aa22.8■■□□□ 1.24
CHD3-204ENST00000439235 ARHGAP28Q9P2N2 729 aa22.8■■□□□ 1.24
CHD3-204ENST00000439235 CTNND2Q9UQB3 1225 aa22.8■■□□□ 1.24
CHD3-204ENST00000439235 ARVCFO00192 962 aa22.79■■□□□ 1.24
CHD3-204ENST00000439235 PPP1R37O75864 691 aa22.79■■□□□ 1.24
CHD3-204ENST00000439235 PHKA2P46019 1235 aa22.79■■□□□ 1.24
CHD3-204ENST00000439235 GTF2BQ00403 316 aa22.79■■□□□ 1.24
CHD3-204ENST00000439235 PTGISQ16647 500 aa22.79■■□□□ 1.24
CHD3-204ENST00000439235 CDCA2Q69YH5 1023 aaPredicted RBP22.79■■□□□ 1.24
CHD3-204ENST00000439235 RSPH3Q86UC2 560 aa22.79■■□□□ 1.24
CHD3-204ENST00000439235 ZNF410Q86VK4 478 aa22.79■■□□□ 1.24
CHD3-204ENST00000439235 NME8Q8N427 588 aa22.79■■□□□ 1.24
CHD3-204ENST00000439235 ZNF507Q8TCN5 953 aa22.79■■□□□ 1.24
CHD3-204ENST00000439235 NELFBQ8WX92 580 aa22.79■■□□□ 1.24
CHD3-204ENST00000439235 KIFC3Q9BVG8 833 aa22.79■■□□□ 1.24
CHD3-204ENST00000439235 STRA6Q9BX79 667 aa22.79■■□□□ 1.24
CHD3-204ENST00000439235 RWDD2AQ9UIY3 292 aa22.79■■□□□ 1.24
CHD3-204ENST00000439235 NOD1Q9Y239 953 aa22.79■■□□□ 1.24
CHD3-204ENST00000439235 BICDL2A1A5D9 508 aa22.78■■□□□ 1.24
CHD3-204ENST00000439235 DENND3A2RUS2 1198 aa22.78■■□□□ 1.24
CHD3-204ENST00000439235 PRPF6O94906 941 aaKnown RBP22.78■■□□□ 1.24
CHD3-204ENST00000439235 VTNP04004 478 aa22.78■■□□□ 1.24
CHD3-204ENST00000439235 CCNE1P24864 410 aa22.78■■□□□ 1.24
CHD3-204ENST00000439235 EFNA5P52803 228 aa22.78■■□□□ 1.24
CHD3-204ENST00000439235 ZC2HC1CQ53FD0 456 aaPredicted RBP22.78■■□□□ 1.24
CHD3-204ENST00000439235 SERINC5Q86VE9 423 aa22.78■■□□□ 1.24
CHD3-204ENST00000439235 NELFCDQ8IXH7 590 aa22.78■■□□□ 1.24
CHD3-204ENST00000439235 P2RX5Q93086 422 aa22.78■■□□□ 1.24
CHD3-204ENST00000439235 SCLT1Q96NL6 688 aa22.78■■□□□ 1.24
CHD3-204ENST00000439235 ACCSQ96QU6 501 aa22.78■■□□□ 1.24
CHD3-204ENST00000439235 NFKBIZQ9BYH8 718 aa22.78■■□□□ 1.24
CHD3-204ENST00000439235 TMEM206Q9H813 350 aa22.78■■□□□ 1.24
CHD3-204ENST00000439235 EXOC7Q9UPT5 735 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms