RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 LPPQ93052 612 aa11.13□□□□□ -0.63
SMPD4-208ENST00000439029 INPP5FQ9Y2H2 1132 aa11.13□□□□□ -0.63
SMPD4-208ENST00000439029 IRAK3Q9Y616 596 aa11.13□□□□□ -0.63
SMPD4-208ENST00000439029 KANSL1LA0AUZ9 987 aa11.12□□□□□ -0.63
SMPD4-208ENST00000439029 BACH1O14867 736 aa11.12□□□□□ -0.63
SMPD4-208ENST00000439029 INPPL1O15357 1258 aa11.12□□□□□ -0.63
SMPD4-208ENST00000439029 LILRB5O75023 590 aa11.12□□□□□ -0.63
SMPD4-208ENST00000439029 LAMP2P13473 410 aa11.12□□□□□ -0.63
SMPD4-208ENST00000439029 NCLP19338 710 aaKnown RBP11.12□□□□□ -0.63
SMPD4-208ENST00000439029 POLGP54098 1239 aaPredicted RBP11.12□□□□□ -0.63
SMPD4-208ENST00000439029 HTR4Q13639 388 aa11.12□□□□□ -0.63
SMPD4-208ENST00000439029 GIT2Q14161 759 aa11.12□□□□□ -0.63
SMPD4-208ENST00000439029 SEC23AQ15436 765 aa11.12□□□□□ -0.63
SMPD4-208ENST00000439029 C15orf39Q6ZRI6 1047 aa11.12□□□□□ -0.63
SMPD4-208ENST00000439029 CYB5R4Q7L1T6 521 aa11.12□□□□□ -0.63
SMPD4-208ENST00000439029 ZNF598Q86UK7 904 aaKnown RBP11.12□□□□□ -0.63
SMPD4-208ENST00000439029 STAMQ92783 540 aa11.12□□□□□ -0.63
SMPD4-208ENST00000439029 EMILIN2Q9BXX0 1053 aa11.12□□□□□ -0.63
SMPD4-208ENST00000439029 NRDE2Q9H7Z3 1164 aa11.12□□□□□ -0.63
SMPD4-208ENST00000439029 JADE2Q9NQC1 790 aa11.12□□□□□ -0.63
SMPD4-208ENST00000439029 DNAJB4Q9UDY4 337 aa11.12□□□□□ -0.63
SMPD4-208ENST00000439029 DOCK6Q96HP0 2047 aa11.11□□□□□ -0.63
SMPD4-208ENST00000439029 SDK1Q7Z5N4 2213 aa11.11□□□□□ -0.63
SMPD4-208ENST00000439029 ZBTB42B2RXF5 422 aa11.11□□□□□ -0.63
SMPD4-208ENST00000439029 TBC1D4O60343 1298 aa11.11□□□□□ -0.63
SMPD4-208ENST00000439029 HBP1O60381 514 aa11.11□□□□□ -0.63
SMPD4-208ENST00000439029 B4GALT3O60512 393 aa11.11□□□□□ -0.63
SMPD4-208ENST00000439029 CSDE1O75534 798 aaKnown RBP11.11□□□□□ -0.63
SMPD4-208ENST00000439029 GALTP07902 379 aa11.11□□□□□ -0.63
SMPD4-208ENST00000439029 SLC11A1P49279 550 aa11.11□□□□□ -0.63
SMPD4-208ENST00000439029 CLCN3P51790 818 aa11.11□□□□□ -0.63
SMPD4-208ENST00000439029 NLRP11P59045 1033 aaKnown RBP11.11□□□□□ -0.63
SMPD4-208ENST00000439029 PRR23BQ6ZRT6 265 aa11.11□□□□□ -0.63
SMPD4-208ENST00000439029 SHDQ96IW2 340 aa11.11□□□□□ -0.63
SMPD4-208ENST00000439029 SDF4Q9BRK5 362 aa11.11□□□□□ -0.63
SMPD4-208ENST00000439029 MRPL9Q9BYD2 267 aaKnown RBP11.11□□□□□ -0.63
SMPD4-208ENST00000439029 PIDD1Q9HB75 910 aa11.11□□□□□ -0.63
SMPD4-208ENST00000439029 SLC2A4RGQ9NR83 387 aa11.11□□□□□ -0.63
SMPD4-208ENST00000439029 KCNH7Q9NS40 1196 aa11.11□□□□□ -0.63
SMPD4-208ENST00000439029 PATJQ8NI35 1801 aa11.1□□□□□ -0.63
SMPD4-208ENST00000439029 MEIS3P2A8K0S8 358 aa11.1□□□□□ -0.63
SMPD4-208ENST00000439029 C1QTNF9BB2RNN3 333 aa11.1□□□□□ -0.63
SMPD4-208ENST00000439029 ANHXE9PGG2 379 aa11.1□□□□□ -0.63
SMPD4-208ENST00000439029 C22orf31O95567 290 aa11.1□□□□□ -0.63
SMPD4-208ENST00000439029 C1QTNF9P0C862 333 aa11.1□□□□□ -0.63
SMPD4-208ENST00000439029 PMLP29590 882 aa11.1□□□□□ -0.63
SMPD4-208ENST00000439029 AK2P54819 239 aa11.1□□□□□ -0.63
SMPD4-208ENST00000439029 RNASELQ05823 741 aaKnown RBP11.1□□□□□ -0.63
SMPD4-208ENST00000439029 ITGB3BPQ13352 177 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-208ENST00000439029 MLF2Q15773 248 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-208ENST00000439029 SLC44A4Q53GD3 710 aa11.1□□□□□ -0.63
SMPD4-208ENST00000439029 PARM1Q6UWI2 310 aa11.1□□□□□ -0.63
SMPD4-208ENST00000439029 ZNF280BQ86YH2 543 aa11.1□□□□□ -0.63
SMPD4-208ENST00000439029 FGF14Q92915 247 aa11.1□□□□□ -0.63
SMPD4-208ENST00000439029 NXPE3Q969Y0 559 aa11.1□□□□□ -0.63
SMPD4-208ENST00000439029 ZNF707Q96C28 371 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-208ENST00000439029 KRT23Q9C075 422 aa11.1□□□□□ -0.63
SMPD4-208ENST00000439029 TBC1D13Q9NVG8 400 aa11.1□□□□□ -0.63
SMPD4-208ENST00000439029 RAB23Q9ULC3 237 aa11.1□□□□□ -0.63
SMPD4-208ENST00000439029 ZMIZ1Q9ULJ6 1067 aa11.1□□□□□ -0.63
SMPD4-208ENST00000439029 AKT3Q9Y243 479 aa11.1□□□□□ -0.63
SMPD4-208ENST00000439029 CEP295Q9C0D2 2601 aa11.1□□□□□ -0.63
SMPD4-208ENST00000439029 SALL3Q9BXA9 1300 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 A0A0U1RQF3 1178 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 CCER2I3L3R5 266 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 PIK3CDO00329 1044 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 ZIC2O95409 532 aaPredicted RBP11.09□□□□□ -0.63
SMPD4-208ENST00000439029 CCNE2O96020 404 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 PROS1P07225 676 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 ATP4AP20648 1035 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 ZNF484Q5JVG2 852 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 SWSAP1Q6NVH7 229 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 PDXDC2PQ6P474 469 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 TAS1R1Q7RTX1 841 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 CCDC60Q8IWA6 550 aaPredicted RBP11.09□□□□□ -0.63
SMPD4-208ENST00000439029 CKAP2LQ8IYA6 745 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 LRRC71Q8N4P6 559 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 CMASQ8NFW8 434 aaPredicted RBP11.09□□□□□ -0.63
SMPD4-208ENST00000439029 NELL1Q92832 810 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 RILPL2Q969X0 211 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 PGBD1Q96JS3 809 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 SCLT1Q96NL6 688 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 ADAMTS10Q9H324 1103 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 PSTPIP2Q9H939 334 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 LTB4R2Q9NPC1 389 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 MRPL17Q9NRX2 175 aaKnown RBP11.09□□□□□ -0.63
SMPD4-208ENST00000439029 SEMA4GQ9NTN9 838 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 PCDHA6Q9UN73 950 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 PCDHA8Q9Y5H6 950 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 RALGAPA1Q6GYQ0 2036 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 MYH15Q9Y2K3 1946 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 IGF2RP11717 2491 aa11.09□□□□□ -0.63
SMPD4-208ENST00000439029 hCG_1642624A0A1W2PR95 340 aa11.08□□□□□ -0.64
SMPD4-208ENST00000439029 TEX28O15482 410 aa11.08□□□□□ -0.64
SMPD4-208ENST00000439029 LILRB3O75022 631 aa11.08□□□□□ -0.64
SMPD4-208ENST00000439029 TARSP26639 723 aaKnown RBP11.08□□□□□ -0.64
SMPD4-208ENST00000439029 NTHL1P78549 312 aa11.08□□□□□ -0.64
SMPD4-208ENST00000439029 MTAPQ13126 283 aa11.08□□□□□ -0.64
SMPD4-208ENST00000439029 IMMTQ16891 758 aaKnown RBP11.08□□□□□ -0.64
SMPD4-208ENST00000439029 FAM160B1Q5W0V3 765 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms