RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 PSMA3P25788 255 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 PEX19P40855 299 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 STAT5AP42229 794 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 ITGA1P56199 1179 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 PSMC1P62191 440 aaKnown RBP4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 U2AF1Q01081 240 aaKnown RBP eCLIP4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 AMPD2Q01433 879 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 ROR1Q01973 937 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 MTA1Q13330 715 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 LONRF2Q1L5Z9 754 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 NBPF8Q3BBV2 869 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 ATP13A4Q4VNC1 1196 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 DNAJC21Q5F1R6 531 aaKnown RBP4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 SLC10A5Q5PT55 438 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 GPR158Q5T848 1215 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 SYDE2Q5VT97 1194 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 LMBRD2Q68DH5 695 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 MRM1Q6IN84 353 aaKnown RBP4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 FAM180BQ6P0A1 224 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 CNNM4Q6P4Q7 775 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 LDHAL6AQ6ZMR3 332 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 ARHGEF18Q6ZSZ5 1173 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 EPM2AIP1Q7L775 607 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 CNTD1Q8N815 330 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 IGDCC4Q8TDY8 1250 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 LEO1Q8WVC0 666 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 FGD4Q96M96 766 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 PPM1MQ96MI6 270 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 ZSWIM3Q96MP5 696 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 CLUHP3Q96NS8 147 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 TM9SF2Q99805 663 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 GBP3Q9H0R5 595 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 L2HGDHQ9H9P8 463 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 NCOA5Q9HCD5 579 aaKnown RBP4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 KIAA1586Q9HCI6 787 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 ALG13Q9NP73 1137 aaKnown RBP4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 ANLNQ9NQW6 1124 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 RASSF1Q9NS23 344 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 BLOC1S4Q9NUP1 217 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 WHRNQ9P202 907 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 FNIP2Q9P278 1114 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 FRMPD2Q68DX3 1309 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 FAM170AA1A519 330 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 GTPBP10A4D1E9 387 aaKnown RBP4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 C7orf72A4D263 438 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 C19orf81C9J6K1 198 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 CHL1O00533 1208 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 MUSKO15146 869 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 DDAH1O94760 285 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 SDSP20132 328 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 UBA7P41226 1012 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 ALDH5A1P51649 535 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 GNPTABQ3T906 1256 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 FNDC3BQ53EP0 1204 aaKnown RBP4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 SPDYAQ5MJ70 313 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 AGAP9Q5VTM2 703 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 FOXB2Q5VYV0 432 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 HEATR6Q6AI08 1181 aaKnown RBP4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 MILR1Q7Z6M3 343 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 UBE2Q1Q7Z7E8 422 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 TBC1D1Q86TI0 1168 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 SPATS2Q86XZ4 545 aaKnown RBP4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 EGFL6Q8IUX8 553 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 FAM186BQ8IYM0 893 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 ZNF713Q8N859 430 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 ZBTB38Q8NAP3 1195 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 NAXEQ8NCW5 288 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 APPL2Q8NEU8 664 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 OR6P1Q8NGX9 317 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 COG1Q8WTW3 980 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 TTC17Q96AE7 1141 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 HAUS7Q99871 368 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 SPATA9Q9BWV2 254 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 NAA15Q9BXJ9 866 aaKnown RBP4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 AP1M1Q9BXS5 423 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 XPO4Q9C0E2 1151 aaKnown RBP4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 TCF7L1Q9HCS4 588 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 HDAC5Q9UQL6 1122 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 ZNF652Q9Y2D9 606 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 TMX2Q9Y320 296 aa4.26□□□□□ -1.73
HMGB1P12-201ENST00000438594 TRBV23OR9-2A0A075B6M9 112 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 A0A1B0GVC2 190 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 TRIM64CA6NLI5 447 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 TOR1BO14657 336 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 PLD2O14939 933 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 GPR42O15529 346 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 SGSM2O43147 1006 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 PPM1BO75688 479 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 FBXO21O94952 628 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 INMTO95050 263 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 CNOT4O95628 575 aaKnown RBP4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 LPOP22079 712 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 GUCY2CP25092 1073 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 RAD52P43351 418 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 MAPK9P45984 424 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 SELENOPP49908 381 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 AK2P54819 239 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 TGFB2P61812 414 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms