RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 DHX15O43143 795 aaKnown RBP12.2□□□□□ -0.46
HMGCL-204ENST00000436439 KINO60870 393 aaKnown RBP12.2□□□□□ -0.46
HMGCL-204ENST00000436439 CSPG5O95196 566 aa12.2□□□□□ -0.46
HMGCL-204ENST00000436439 ATP4AP20648 1035 aa12.2□□□□□ -0.46
HMGCL-204ENST00000436439 BMPR1AP36894 532 aa12.2□□□□□ -0.46
HMGCL-204ENST00000436439 TXLNAP40222 546 aa12.2□□□□□ -0.46
HMGCL-204ENST00000436439 TXKP42681 527 aa12.2□□□□□ -0.46
HMGCL-204ENST00000436439 CCDC173Q0VFZ6 552 aa12.2□□□□□ -0.46
HMGCL-204ENST00000436439 COL19A1Q14993 1142 aa12.2□□□□□ -0.46
HMGCL-204ENST00000436439 SPECC1Q5M775 1068 aa12.2□□□□□ -0.46
HMGCL-204ENST00000436439 IER5Q5VY09 327 aa12.2□□□□□ -0.46
HMGCL-204ENST00000436439 PTCRAQ6ISU1 281 aaPredicted RBP12.2□□□□□ -0.46
HMGCL-204ENST00000436439 POTEBQ6S5H4 581 aa12.2□□□□□ -0.46
HMGCL-204ENST00000436439 MTHFD1LQ6UB35 978 aa12.2□□□□□ -0.46
HMGCL-204ENST00000436439 ABHD15Q6UXT9 468 aa12.2□□□□□ -0.46
HMGCL-204ENST00000436439 PABPC5Q96DU9 382 aaKnown RBP12.2□□□□□ -0.46
HMGCL-204ENST00000436439 EPSTI1Q96J88 318 aa12.2□□□□□ -0.46
HMGCL-204ENST00000436439 LRFN3Q9BTN0 628 aa12.2□□□□□ -0.46
HMGCL-204ENST00000436439 CELF4Q9BZC1 486 aaKnown RBP12.2□□□□□ -0.46
HMGCL-204ENST00000436439 NUP62CLQ9H1M0 184 aa12.2□□□□□ -0.46
HMGCL-204ENST00000436439 NSUN3Q9H649 340 aaKnown RBP12.2□□□□□ -0.46
HMGCL-204ENST00000436439 CDHR5Q9HBB8 845 aa12.2□□□□□ -0.46
HMGCL-204ENST00000436439 PADI3Q9ULW8 664 aa12.2□□□□□ -0.46
HMGCL-204ENST00000436439 STK24Q9Y6E0 443 aa12.2□□□□□ -0.46
HMGCL-204ENST00000436439 SMIM35A0A1B0GVV1 85 aa12.19□□□□□ -0.46
HMGCL-204ENST00000436439 FAM86C2PA6NEL3 165 aa12.19□□□□□ -0.46
HMGCL-204ENST00000436439 GRXCR2A6NFK2 248 aa12.19□□□□□ -0.46
HMGCL-204ENST00000436439 RB1P06400 928 aa12.19□□□□□ -0.46
HMGCL-204ENST00000436439 KLRC1P26715 233 aa12.19□□□□□ -0.46
HMGCL-204ENST00000436439 GTF2F1P35269 517 aaKnown RBP eCLIP12.19□□□□□ -0.46
HMGCL-204ENST00000436439 LTBRP36941 435 aa12.19□□□□□ -0.46
HMGCL-204ENST00000436439 TECP42680 631 aa12.19□□□□□ -0.46
HMGCL-204ENST00000436439 SPIRE1Q08AE8 756 aa12.19□□□□□ -0.46
HMGCL-204ENST00000436439 CAMK1Q14012 370 aa12.19□□□□□ -0.46
HMGCL-204ENST00000436439 BTG3Q14201 252 aaPredicted RBP12.19□□□□□ -0.46
HMGCL-204ENST00000436439 TPRNQ4KMQ1 711 aa12.19□□□□□ -0.46
HMGCL-204ENST00000436439 EP400NLQ6ZTU2 488 aa12.19□□□□□ -0.46
HMGCL-204ENST00000436439 USP49Q70CQ1 688 aa12.19□□□□□ -0.46
HMGCL-204ENST00000436439 PLA2G4DQ86XP0 818 aa12.19□□□□□ -0.46
HMGCL-204ENST00000436439 SLC5A5Q92911 643 aa12.19□□□□□ -0.46
HMGCL-204ENST00000436439 RIT2Q99578 217 aa12.19□□□□□ -0.46
HMGCL-204ENST00000436439 RBSNQ9H1K0 784 aa12.19□□□□□ -0.46
HMGCL-204ENST00000436439 TNMDQ9H2S6 317 aa12.19□□□□□ -0.46
HMGCL-204ENST00000436439 TMX1Q9H3N1 280 aa12.19□□□□□ -0.46
HMGCL-204ENST00000436439 MRPL42Q9Y6G3 142 aaKnown RBP12.19□□□□□ -0.46
HMGCL-204ENST00000436439 SQORQ9Y6N5 450 aa12.19□□□□□ -0.46
HMGCL-204ENST00000436439 C5orf42Q9H799 3197 aa12.19□□□□□ -0.46
HMGCL-204ENST00000436439 KDM3AQ9Y4C1 1321 aa12.19□□□□□ -0.46
HMGCL-204ENST00000436439 ZBTB42B2RXF5 422 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 PI4K2BG5E9Z4 385 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 M0QZ92 97 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 POLR2DO15514 142 aaKnown RBP12.18□□□□□ -0.46
HMGCL-204ENST00000436439 MARCH6O60337 910 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 MGEA5O60502 916 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 PSMD10O75832 226 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 UBA7P41226 1012 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 GATMP50440 423 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 DLX2Q07687 328 aaPredicted RBP12.18□□□□□ -0.46
HMGCL-204ENST00000436439 HYAL1Q12794 435 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 E2F4Q16254 413 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 PAN2Q504Q3 1202 aaKnown RBP12.18□□□□□ -0.46
HMGCL-204ENST00000436439 KANK3Q6NY19 840 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 KRBA2Q6ZNG9 492 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 TMEM40Q8WWA1 233 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 PPP1R9BQ96SB3 815 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 C11orf84Q9BUA3 381 aaPredicted RBP12.18□□□□□ -0.46
HMGCL-204ENST00000436439 ALG13Q9NP73 1137 aaKnown RBP12.18□□□□□ -0.46
HMGCL-204ENST00000436439 CLDND1Q9NY35 253 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 LRWD1Q9UFC0 647 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 A0A087X0B3 334 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 IPO5O00410 1097 aaKnown RBP12.18□□□□□ -0.46
HMGCL-204ENST00000436439 BACH1O14867 736 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 ACTN4O43707 911 aaKnown RBP12.18□□□□□ -0.46
HMGCL-204ENST00000436439 HBP1O60381 514 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 RPLP2P05387 115 aaKnown RBP12.18□□□□□ -0.46
HMGCL-204ENST00000436439 DNAJB1P25685 340 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 SLC26A2P50443 739 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 KRT76Q01546 638 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 PAK2Q13177 524 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 PPP2R5CQ13362 524 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 CTC1Q2NKJ3 1217 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 LONRF3Q496Y0 759 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 HYIQ5T013 277 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 SWSAP1Q6NVH7 229 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 PDXDC2PQ6P474 469 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 B3GNT9Q6UX72 402 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 CABP7Q86V35 215 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 NPAS4Q8IUM7 802 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 CMTR2Q8IYT2 770 aaKnown RBP12.18□□□□□ -0.46
HMGCL-204ENST00000436439 KIAA0319LQ8IZA0 1049 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 GJD3Q8N144 294 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 NME8Q8N427 588 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 KCTD17Q8N5Z5 321 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 IQUBQ8NA54 791 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 ATP8B4Q8TF62 1192 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 CCDC34Q96HJ3 373 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 PPP1R16BQ96T49 567 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 ZNF577Q9BSK1 485 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 MMTAG2Q9BU76 263 aaKnown RBP12.18□□□□□ -0.46
HMGCL-204ENST00000436439 FTHL17Q9BXU8 183 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms