RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 P4HA2O15460 535 aa18.21■□□□□ 0.51
LIMK1-203ENST00000435201 CCNE2O96020 404 aa18.21■□□□□ 0.51
LIMK1-203ENST00000435201 TRIM49P0CI25 452 aa18.21■□□□□ 0.51
LIMK1-203ENST00000435201 TRIM49CP0CI26 452 aa18.21■□□□□ 0.51
LIMK1-203ENST00000435201 NCKAP1LP55160 1127 aa18.21■□□□□ 0.51
LIMK1-203ENST00000435201 PLS1Q14651 629 aa18.21■□□□□ 0.51
LIMK1-203ENST00000435201 ANGEL2Q5VTE6 544 aaKnown RBP18.21■□□□□ 0.51
LIMK1-203ENST00000435201 SNRNP48Q6IEG0 339 aaKnown RBP18.21■□□□□ 0.51
LIMK1-203ENST00000435201 GJB7Q6PEY0 223 aa18.21■□□□□ 0.51
LIMK1-203ENST00000435201 WNK4Q96J92 1243 aa18.21■□□□□ 0.51
LIMK1-203ENST00000435201 MOV10L1Q9BXT6 1211 aaKnown RBP18.21■□□□□ 0.51
LIMK1-203ENST00000435201 DNAJC12Q9UKB3 198 aa18.21■□□□□ 0.51
LIMK1-203ENST00000435201 RIPK3Q9Y572 518 aa18.21■□□□□ 0.51
LIMK1-203ENST00000435201 PPP2R3BQ9Y5P8 575 aa18.21■□□□□ 0.51
LIMK1-203ENST00000435201 ZNF541Q9H0D2 1346 aa18.2■□□□□ 0.5
LIMK1-203ENST00000435201 GRID2IPA4D2P6 1211 aa18.2■□□□□ 0.5
LIMK1-203ENST00000435201 ATP2A1O14983 1001 aa18.2■□□□□ 0.5
LIMK1-203ENST00000435201 DKC1O60832 514 aaKnown RBP eCLIP18.2■□□□□ 0.5
LIMK1-203ENST00000435201 CXCR5P32302 372 aa18.2■□□□□ 0.5
LIMK1-203ENST00000435201 CETN1Q12798 172 aa18.2■□□□□ 0.5
LIMK1-203ENST00000435201 XKR9Q5GH70 373 aa18.2■□□□□ 0.5
LIMK1-203ENST00000435201 HAUS6Q7Z4H7 955 aa18.2■□□□□ 0.5
LIMK1-203ENST00000435201 VTI1AQ96AJ9 217 aa18.2■□□□□ 0.5
LIMK1-203ENST00000435201 PSMB7Q99436 277 aa18.2■□□□□ 0.5
LIMK1-203ENST00000435201 VIPAS39Q9H9C1 493 aa18.2■□□□□ 0.5
LIMK1-203ENST00000435201 A0A0A6YYK5 440 aaPredicted RBP18.2■□□□□ 0.5
LIMK1-203ENST00000435201 CES2O00748 559 aa18.2■□□□□ 0.5
LIMK1-203ENST00000435201 EVI5O60447 810 aa18.2■□□□□ 0.5
LIMK1-203ENST00000435201 NR3C2P08235 984 aa18.2■□□□□ 0.5
LIMK1-203ENST00000435201 H2AFZP0C0S5 128 aa18.2■□□□□ 0.5
LIMK1-203ENST00000435201 LMNB1P20700 586 aa18.2■□□□□ 0.5
LIMK1-203ENST00000435201 HMGCS2P54868 508 aa18.2■□□□□ 0.5
LIMK1-203ENST00000435201 H2AFVQ71UI9 128 aa18.2■□□□□ 0.5
LIMK1-203ENST00000435201 XXYLT1Q8NBI6 393 aa18.2■□□□□ 0.5
LIMK1-203ENST00000435201 NSUN6Q8TEA1 469 aaKnown RBP18.2■□□□□ 0.5
LIMK1-203ENST00000435201 HVCN1Q96D96 273 aa18.2■□□□□ 0.5
LIMK1-203ENST00000435201 INPP4AQ96PE3 977 aaPredicted RBP18.2■□□□□ 0.5
LIMK1-203ENST00000435201 SUGCTQ9HAC7 445 aa18.2■□□□□ 0.5
LIMK1-203ENST00000435201 ZNF214Q9UL59 606 aaPredicted RBP18.2■□□□□ 0.5
LIMK1-203ENST00000435201 EXOC7Q9UPT5 735 aa18.2■□□□□ 0.5
LIMK1-203ENST00000435201 PCDHA10Q9Y5I2 948 aa18.2■□□□□ 0.5
LIMK1-203ENST00000435201 FTCDO95954 541 aa18.19■□□□□ 0.5
LIMK1-203ENST00000435201 DRAP1Q14919 205 aaPredicted RBP18.19■□□□□ 0.5
LIMK1-203ENST00000435201 CDHR1Q96JP9 859 aa18.19■□□□□ 0.5
LIMK1-203ENST00000435201 TMOD4Q9NZQ9 345 aa18.19■□□□□ 0.5
LIMK1-203ENST00000435201 WDR81Q562E7 1941 aa18.19■□□□□ 0.5
LIMK1-203ENST00000435201 LOC285556D6RIA3 1793 aa18.19■□□□□ 0.5
LIMK1-203ENST00000435201 DDX3XO00571 662 aaKnown RBP eCLIP18.18■□□□□ 0.5
LIMK1-203ENST00000435201 STAM2O75886 525 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 VAMP7P51809 220 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 SMTNP53814 917 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 PEX3P56589 373 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 GLE1Q53GS7 698 aaKnown RBP18.18■□□□□ 0.5
LIMK1-203ENST00000435201 NOL9Q5SY16 702 aaKnown RBP18.18■□□□□ 0.5
LIMK1-203ENST00000435201 FAM102BQ5T8I3 360 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 CCNI2Q6ZMN8 369 aaPredicted RBP18.18■□□□□ 0.5
LIMK1-203ENST00000435201 OTUD6AQ7L8S5 288 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 LMBR1Q8WVP7 490 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 TEX13BQ9BXU2 312 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 PDE11AQ9HCR9 933 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 HSPBP1Q9NZL4 362 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 ARID2Q68CP9 1835 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 KIAA1217Q5T5P2 1943 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 NFASCO94856 1347 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 MYPNQ86TC9 1320 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 POLR3GO15318 223 aaPredicted RBP18.18■□□□□ 0.5
LIMK1-203ENST00000435201 CATSPERGQ6ZRH7 1159 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 ZNF771Q7L3S4 317 aaPredicted RBP18.18■□□□□ 0.5
LIMK1-203ENST00000435201 RDH13Q8NBN7 331 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 SLC30A5Q8TAD4 765 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 TAF4BQ92750 862 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 ATP6V0A1Q93050 837 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 KLRG1Q96E93 195 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 CBWD1Q9BRT8 395 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 GPR88Q9GZN0 384 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 PCIF1Q9H4Z3 704 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 ACAD9Q9H845 621 aa18.18■□□□□ 0.5
LIMK1-203ENST00000435201 EMSYQ7Z589 1322 aa18.17■□□□□ 0.5
LIMK1-203ENST00000435201 TMEM150BA6NC51 233 aa18.17■□□□□ 0.5
LIMK1-203ENST00000435201 SLC16A4O15374 487 aa18.17■□□□□ 0.5
LIMK1-203ENST00000435201 NOP2P46087 812 aaKnown RBP18.17■□□□□ 0.5
LIMK1-203ENST00000435201 NPEPPSP55786 919 aa18.17■□□□□ 0.5
LIMK1-203ENST00000435201 DMP1Q13316 513 aaPredicted RBP18.17■□□□□ 0.5
LIMK1-203ENST00000435201 RPS6KA1Q15418 735 aa18.17■□□□□ 0.5
LIMK1-203ENST00000435201 PLA2G4FQ68DD2 849 aa18.17■□□□□ 0.5
LIMK1-203ENST00000435201 U2AF1L4Q8WU68 220 aaKnown RBP18.17■□□□□ 0.5
LIMK1-203ENST00000435201 KIFAP3Q92845 792 aa18.17■□□□□ 0.5
LIMK1-203ENST00000435201 LRRC1Q9BTT6 524 aa18.17■□□□□ 0.5
LIMK1-203ENST00000435201 C17orf75Q9HAS0 396 aa18.17■□□□□ 0.5
LIMK1-203ENST00000435201 H3BQF6 201 aa18.16■□□□□ 0.5
LIMK1-203ENST00000435201 PMM2O15305 246 aa18.16■□□□□ 0.5
LIMK1-203ENST00000435201 KCNA2P16389 499 aa18.16■□□□□ 0.5
LIMK1-203ENST00000435201 MCCD1P59942 119 aaPredicted RBP18.16■□□□□ 0.5
LIMK1-203ENST00000435201 TMEM132BQ14DG7 1078 aa18.16■□□□□ 0.5
LIMK1-203ENST00000435201 C8orf74Q6P047 294 aa18.16■□□□□ 0.5
LIMK1-203ENST00000435201 ANO5Q75V66 913 aa18.16■□□□□ 0.5
LIMK1-203ENST00000435201 SYCE1Q8N0S2 351 aa18.16■□□□□ 0.5
LIMK1-203ENST00000435201 LRRC57Q8N9N7 239 aa18.16■□□□□ 0.5
LIMK1-203ENST00000435201 LMO3Q8TAP4 145 aa18.16■□□□□ 0.5
LIMK1-203ENST00000435201 LNX1Q8TBB1 728 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms