RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 MEIS1O00470 390 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 DDX3YO15523 660 aaKnown RBP12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 FXR2P51116 673 aaKnown RBP eCLIP12.45□□□□□ -0.422e-11■■■□□ 16.3
HMGCS1-202ENST00000433297 EIF6P56537 245 aaKnown RBP12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 ANO7Q6IWH7 933 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 TAOK3Q9H2K8 898 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 GRHL1Q9NZI5 618 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 CTTNBP2NLQ9P2B4 639 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 BCS1LQ9Y276 419 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 FAM187AA6NFU0 413 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 A6NHS1 94 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 MAP3K13O43283 966 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 MARCKSL1P49006 195 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 PLS1Q14651 629 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 TRIP13Q15645 432 aaPredicted RBP12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 BICDL1Q6ZP65 573 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 MAPKAPK5Q8IW41 473 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 CNBD1Q8NA66 436 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 LNX1Q8TBB1 728 aaPredicted RBP12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 ERP27Q96DN0 273 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 RAB3IPQ96QF0 476 aaPredicted RBP12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 PITPNM3Q9BZ71 974 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 TAS2R14Q9NYV8 317 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 DLGAP2Q9P1A6 1054 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 DDX25Q9UHL0 483 aaKnown RBP12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 TNFAIP3P21580 790 aa12.44□□□□□ -0.42
HMGCS1-202ENST00000433297 VPS41P49754 854 aa12.44□□□□□ -0.42
HMGCS1-202ENST00000433297 CALCOCO2Q13137 446 aa12.44□□□□□ -0.42
HMGCS1-202ENST00000433297 SRRM1Q8IYB3 904 aaKnown RBP12.44□□□□□ -0.42
HMGCS1-202ENST00000433297 TBC1D16Q8TBP0 767 aa12.44□□□□□ -0.42
HMGCS1-202ENST00000433297 ZNF526Q8TF50 670 aaPredicted RBP12.44□□□□□ -0.42
HMGCS1-202ENST00000433297 KRT35Q92764 455 aa12.44□□□□□ -0.42
HMGCS1-202ENST00000433297 RPS6KC1Q96S38 1066 aa12.44□□□□□ -0.42
HMGCS1-202ENST00000433297 KCTD10Q9H3F6 313 aa12.44□□□□□ -0.42
HMGCS1-202ENST00000433297 LRRN2O75325 713 aa12.44□□□□□ -0.42
HMGCS1-202ENST00000433297 AKAP3O75969 853 aa12.44□□□□□ -0.42
HMGCS1-202ENST00000433297 RAB27AP51159 221 aa12.44□□□□□ -0.42
HMGCS1-202ENST00000433297 DHX34Q14147 1143 aaKnown RBP12.44□□□□□ -0.42
HMGCS1-202ENST00000433297 MESDQ14696 234 aa12.44□□□□□ -0.42
HMGCS1-202ENST00000433297 SETDB1Q15047 1291 aa12.44□□□□□ -0.42
HMGCS1-202ENST00000433297 MUM1Q2TAK8 710 aa12.44□□□□□ -0.42
HMGCS1-202ENST00000433297 C12orf60Q5U649 245 aa12.44□□□□□ -0.42
HMGCS1-202ENST00000433297 TTC27Q6P3X3 843 aa12.44□□□□□ -0.42
HMGCS1-202ENST00000433297 RFFLQ8WZ73 363 aa12.44□□□□□ -0.42
HMGCS1-202ENST00000433297 SYT15Q9BQS2 421 aa12.44□□□□□ -0.42
HMGCS1-202ENST00000433297 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.44□□□□□ -0.421e-6■■■■■ 64.3
HMGCS1-202ENST00000433297 ALG6Q9Y672 507 aa12.44□□□□□ -0.42
HMGCS1-202ENST00000433297 C1orf167Q5SNV9 1468 aa12.44□□□□□ -0.42
HMGCS1-202ENST00000433297 RAD21O60216 631 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 STAT3P40763 770 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 ADCY7P51828 1080 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 MGAT5Q09328 741 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 RNF220Q5VTB9 566 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 ECHDC2Q86YB7 292 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 PIGOQ8TEQ8 1089 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 CARD9Q9H257 536 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 IKZF4Q9H2S9 585 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 CCDC134Q9H6E4 229 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 GPCPD1Q9NPB8 672 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 CNOT7Q9UIV1 285 aaKnown RBP12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 COL1A1P02452 1464 aaPredicted RBP12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 PFASO15067 1338 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 USP17L5A8MUK1 530 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 RFC5P40937 340 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 PABPC4Q13310 644 aaKnown RBP eCLIP12.43□□□□□ -0.428e-8■■□□□ 13.6
HMGCS1-202ENST00000433297 MPP2Q14168 576 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 PDIA5Q14554 519 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 PRELID2Q8N945 189 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 CDC42EP4Q9H3Q1 356 aaKnown RBP12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 NKIRAS1Q9NYS0 192 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 C2CD2Q9Y426 696 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 TCRBV7S2A1N4TA0A589 114 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 SFI1A8K8P3 1242 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 AHCYL1O43865 530 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 ENTPD5O75356 428 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 UNC5CO95185 931 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 FESP07332 822 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 CALB2P22676 271 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 CTTNQ14247 550 aaKnown RBP12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 DIXDC1Q155Q3 683 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 CCDC6Q16204 474 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 KYNUQ16719 465 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 SPDYCQ5MJ68 293 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 ASRGL1Q7L266 308 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 CROCCP2Q86T23 111 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 TTC8Q8TAM2 541 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 UTP4Q969X6 686 aaKnown RBP12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 MYLK2Q9H1R3 596 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 BCAS3Q9H6U6 928 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 USP40Q9NVE5 1235 aa12.43□□□□□ -0.42
HMGCS1-202ENST00000433297 ZNF804BA4D1E1 1349 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 ERVV-1B6SEH8 477 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 PHF2O75151 1096 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 OAS1P00973 400 aaKnown RBP12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 RARGP13631 454 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 FERP16591 822 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 DRAP1Q14919 205 aaPredicted RBP12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 PPP2R5EQ16537 467 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 TMEM119Q4V9L6 283 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 SBK1Q52WX2 424 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms