RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 HTRA2O43464 458 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 TMEM127O75204 238 aa4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 OFD1O75665 1012 aa4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 PCDH8O95206 1070 aa4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 KNG1P01042 644 aa4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 KRT18P05783 430 aaKnown RBP4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 PHKG2P15735 406 aa4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 PDCP20941 246 aa4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 PDE6BP35913 854 aa4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 MCAMP43121 646 aa4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 ANTXR2P58335 489 aa4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 KCNMB1Q16558 191 aa4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 IFIT1BQ5T764 474 aaKnown RBP4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 TMC5Q6UXY8 1006 aa4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 CD300LDQ6UXZ3 194 aa4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 OVCH2Q7RTZ1 564 aa4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 CATIPQ7Z7H3 387 aa4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 SAMD3Q8N6K7 520 aa4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 SMARCC2Q8TAQ2 1214 aa4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 GAB3Q8WWW8 586 aa4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 FATE1Q969F0 183 aa4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 NKD2Q969F2 451 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 FAM193BQ96PV7 902 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 MCOLN1Q9GZU1 580 aa4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 LIMCH1Q9UPQ0 1083 aa4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 RIPOR2Q9Y4F9 1068 aa4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 A0A1W2PR48 441 aa4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 ANO9A1A5B4 782 aa4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 H3BML4 177 aa4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 N4BP3O15049 544 aa4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 AP1G1O43747 822 aa4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 PEX14O75381 377 aa4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 TUSC2O75896 110 aa4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 APOL3O95236 402 aa4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 CYP2C8P10632 490 aa4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 SRSF3P84103 164 aaKnown RBP4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 CD83Q01151 205 aa4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 KIF23Q02241 960 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 PPARAQ07869 468 aa4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 MGAT2Q10469 447 aa4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 TARBP2Q15633 366 aaKnown RBP4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 BTNL9Q6UXG8 535 aa4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 MIER2Q8N344 545 aa4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 PJA1Q8NG27 643 aa4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 MVB12AQ96EY5 273 aa4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 ACO2Q99798 780 aaKnown RBP4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 C11orf84Q9BUA3 381 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 ACE2Q9BYF1 805 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 OSBPL6Q9BZF3 934 aa4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 TMEM60Q9H2L4 133 aa4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 GREM2Q9H772 168 aa4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 ARHGAP20Q9P2F6 1191 aa4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 ZFP69BQ9UJL9 534 aa4.09□□□□□ -1.75
HMGB1P27-201ENST00000431429 PLEKHD1A6NEE1 506 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 BIN1O00499 593 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 ZBED1O96006 694 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 JUNBP17275 347 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 RHCEP18577 417 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 AGFG1P52594 562 aaKnown RBP4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 MEF2AQ02078 507 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 RHDQ02161 417 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 DSC2Q02487 901 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 DLX2Q07687 328 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 DGKDQ16760 1214 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 C3orf36Q3SXR2 165 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 DPP8Q6V1X1 898 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 SRGAP1Q7Z6B7 1085 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 ZNF605Q86T29 641 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 KIAA0319LQ8IZA0 1049 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 MARCH10Q8NA82 808 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 KYQ8NBH2 561 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 GLB1L3Q8NCI6 653 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 ZBTB34Q8NCN2 500 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 OR2I1PQ8NGU4 316 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 MZB1Q8WU39 189 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 NRG4Q8WWG1 115 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 C1GALT1C1Q96EU7 318 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 DDX11Q96FC9 970 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 LIN37Q96GY3 246 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 PAWRQ96IZ0 340 aaKnown RBP4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 HIST1H2AHQ96KK5 128 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 LRGUKQ96M69 825 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 NOX5Q96PH1 765 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 WRNIP1Q96S55 665 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 HIST1H2AJQ99878 128 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 NOL10Q9BSC4 688 aaKnown RBP4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 TACO1Q9BSH4 297 aaKnown RBP4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 LRFN3Q9BTN0 628 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 ZFP64Q9NPA5 681 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 RCAN3Q9UKA8 241 aa4.08□□□□□ -1.76
HMGB1P27-201ENST00000431429 FRMPD2Q68DX3 1309 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 CCDC154A6NI56 674 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 TPP1O14773 563 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 MAFGO15525 162 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 TPD52L2O43399 206 aaKnown RBP4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 NRP2O60462 931 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 CTNND1O60716 968 aaKnown RBP4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 SEMA7AO75326 666 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms