RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 ADCY2Q08462 1091 aa6.86□□□□□ -1.31
PTPN4-204ENST00000431283 SQSTM1Q13501 440 aa6.86□□□□□ -1.31
PTPN4-204ENST00000431283 RRP1BQ14684 758 aaKnown RBP6.86□□□□□ -1.31
PTPN4-204ENST00000431283 ACAP1Q15027 740 aa6.86□□□□□ -1.31
PTPN4-204ENST00000431283 ELAVL1Q15717 326 aaKnown RBP6.86□□□□□ -1.31
PTPN4-204ENST00000431283 FAM111BQ6SJ93 734 aa6.86□□□□□ -1.31
PTPN4-204ENST00000431283 TMPRSS6Q8IU80 811 aa6.86□□□□□ -1.31
PTPN4-204ENST00000431283 ZZZ3Q8IYH5 903 aa6.86□□□□□ -1.31
PTPN4-204ENST00000431283 PLA2G15Q8NCC3 412 aa6.86□□□□□ -1.31
PTPN4-204ENST00000431283 C16orf92Q96LL3 132 aa6.86□□□□□ -1.31
PTPN4-204ENST00000431283 ZNF703Q9H7S9 590 aaPredicted RBP6.86□□□□□ -1.31
PTPN4-204ENST00000431283 IL23AQ9NPF7 189 aa6.86□□□□□ -1.31
PTPN4-204ENST00000431283 IFT57Q9NWB7 429 aa6.86□□□□□ -1.31
PTPN4-204ENST00000431283 NCDNQ9UBB6 729 aa6.86□□□□□ -1.31
PTPN4-204ENST00000431283 DNAI1Q9UI46 699 aa6.86□□□□□ -1.31
PTPN4-204ENST00000431283 C2orf78A6NCI8 922 aa6.85□□□□□ -1.31
PTPN4-204ENST00000431283 PPP1R12AO14974 1030 aaPredicted RBP6.85□□□□□ -1.31
PTPN4-204ENST00000431283 JUNP05412 331 aaKnown RBP6.85□□□□□ -1.31
PTPN4-204ENST00000431283 MAN2A2P49641 1150 aa6.85□□□□□ -1.31
PTPN4-204ENST00000431283 MAN2A1Q16706 1144 aa6.85□□□□□ -1.31
PTPN4-204ENST00000431283 CRB2Q5IJ48 1285 aa6.85□□□□□ -1.31
PTPN4-204ENST00000431283 MFSD5Q6N075 450 aa6.85□□□□□ -1.31
PTPN4-204ENST00000431283 PASD1Q8IV76 773 aa6.85□□□□□ -1.31
PTPN4-204ENST00000431283 SYNPOQ8N3V7 929 aa6.85□□□□□ -1.31
PTPN4-204ENST00000431283 ELF4Q99607 663 aaPredicted RBP6.85□□□□□ -1.31
PTPN4-204ENST00000431283 C14orf93Q9H972 538 aaKnown RBP6.85□□□□□ -1.31
PTPN4-204ENST00000431283 TOX4O94842 621 aa6.84□□□□□ -1.31
PTPN4-204ENST00000431283 VSIG10L2P0DP72 767 aa6.84□□□□□ -1.31
PTPN4-204ENST00000431283 NEK4P51957 841 aa6.84□□□□□ -1.31
PTPN4-204ENST00000431283 SMAD3P84022 425 aaKnown RBP6.84□□□□□ -1.31
PTPN4-204ENST00000431283 PABPC4Q13310 644 aaKnown RBP eCLIP6.84□□□□□ -1.31
PTPN4-204ENST00000431283 SPTY2D1Q68D10 685 aaPredicted RBP6.84□□□□□ -1.31
PTPN4-204ENST00000431283 IGFL4Q6B9Z1 124 aa6.84□□□□□ -1.31
PTPN4-204ENST00000431283 AMER2Q8N7J2 671 aa6.84□□□□□ -1.31
PTPN4-204ENST00000431283 NKD2Q969F2 451 aaPredicted RBP6.84□□□□□ -1.31
PTPN4-204ENST00000431283 GPHA2Q96T91 129 aa6.84□□□□□ -1.31
PTPN4-204ENST00000431283 MMRN2Q9H8L6 949 aa6.84□□□□□ -1.31
PTPN4-204ENST00000431283 SPO11Q9Y5K1 396 aa6.84□□□□□ -1.31
PTPN4-204ENST00000431283 MFAP3LO75121 409 aa6.83□□□□□ -1.32
PTPN4-204ENST00000431283 RFPL3O75679 317 aa6.83□□□□□ -1.32
PTPN4-204ENST00000431283 SDSP20132 328 aa6.83□□□□□ -1.32
PTPN4-204ENST00000431283 NPEPPSP55786 919 aa6.83□□□□□ -1.32
PTPN4-204ENST00000431283 DPTQ07507 201 aa6.83□□□□□ -1.32
PTPN4-204ENST00000431283 TCEA2Q15560 299 aa6.83□□□□□ -1.32
PTPN4-204ENST00000431283 FKBP15Q5T1M5 1219 aa6.83□□□□□ -1.32
PTPN4-204ENST00000431283 CLEC14AQ86T13 490 aa6.83□□□□□ -1.32
PTPN4-204ENST00000431283 CHFRQ96EP1 664 aa6.83□□□□□ -1.32
PTPN4-204ENST00000431283 HIST1H2AHQ96KK5 128 aa6.83□□□□□ -1.32
PTPN4-204ENST00000431283 UIMC1Q96RL1 719 aa6.83□□□□□ -1.32
PTPN4-204ENST00000431283 HIST1H2AJQ99878 128 aa6.83□□□□□ -1.32
PTPN4-204ENST00000431283 GPR87Q9BY21 358 aa6.83□□□□□ -1.32
PTPN4-204ENST00000431283 MTG2Q9H4K7 406 aa6.83□□□□□ -1.32
PTPN4-204ENST00000431283 INTS7Q9NVH2 962 aaKnown RBP6.83□□□□□ -1.32
PTPN4-204ENST00000431283 OXSMQ9NWU1 459 aa6.83□□□□□ -1.32
PTPN4-204ENST00000431283 TMEM260Q9NX78 707 aa6.83□□□□□ -1.32
PTPN4-204ENST00000431283 IPO13O94829 963 aaKnown RBP6.82□□□□□ -1.32
PTPN4-204ENST00000431283 PRPF6O94906 941 aaKnown RBP6.82□□□□□ -1.32
PTPN4-204ENST00000431283 FSBPO95073 299 aa6.82□□□□□ -1.32
PTPN4-204ENST00000431283 CD40P25942 277 aa6.82□□□□□ -1.32
PTPN4-204ENST00000431283 INHBCP55103 352 aa6.82□□□□□ -1.32
PTPN4-204ENST00000431283 MYBPC3Q14896 1274 aa6.82□□□□□ -1.32
PTPN4-204ENST00000431283 SART3Q15020 963 aaKnown RBP6.82□□□□□ -1.32
PTPN4-204ENST00000431283 KIAA1841Q6NSI8 718 aa6.82□□□□□ -1.32
PTPN4-204ENST00000431283 HOMER1Q86YM7 354 aa6.82□□□□□ -1.32
PTPN4-204ENST00000431283 DRC1Q96MC2 740 aa6.82□□□□□ -1.32
PTPN4-204ENST00000431283 NOL10Q9BSC4 688 aaKnown RBP6.82□□□□□ -1.32
PTPN4-204ENST00000431283 MYL10Q9BUA6 226 aa6.82□□□□□ -1.32
PTPN4-204ENST00000431283 POFUT1Q9H488 388 aa6.82□□□□□ -1.32
PTPN4-204ENST00000431283 CEP72Q9P209 647 aa6.82□□□□□ -1.32
PTPN4-204ENST00000431283 MYO15BQ96JP2 1530 aa6.81□□□□□ -1.32
PTPN4-204ENST00000431283 ST20-MTHFSA0A0A6YYL1 179 aa6.81□□□□□ -1.32
PTPN4-204ENST00000431283 OVOL3O00110 214 aa6.81□□□□□ -1.32
PTPN4-204ENST00000431283 PEX11BO96011 259 aa6.81□□□□□ -1.32
PTPN4-204ENST00000431283 HNRNPLP14866 589 aaKnown RBP eCLIP6.81□□□□□ -1.32
PTPN4-204ENST00000431283 SCNN1GP51170 649 aa6.81□□□□□ -1.32
PTPN4-204ENST00000431283 CCDC144BQ3MJ40 725 aa6.81□□□□□ -1.32
PTPN4-204ENST00000431283 RTF1Q92541 710 aaKnown RBP6.81□□□□□ -1.32
PTPN4-204ENST00000431283 UBXN4Q92575 508 aa6.81□□□□□ -1.32
PTPN4-204ENST00000431283 CLIP3Q96DZ5 547 aa6.81□□□□□ -1.32
PTPN4-204ENST00000431283 CEP89Q96ST8 783 aa6.81□□□□□ -1.32
PTPN4-204ENST00000431283 EPC1Q9H2F5 836 aa6.81□□□□□ -1.32
PTPN4-204ENST00000431283 A0A0A6YYJ9 748 aa6.8□□□□□ -1.32
PTPN4-204ENST00000431283 GOLGA6L6A8MZA4 724 aa6.8□□□□□ -1.32
PTPN4-204ENST00000431283 KPNA6O60684 536 aa6.8□□□□□ -1.32
PTPN4-204ENST00000431283 GNAT2P19087 354 aa6.8□□□□□ -1.32
PTPN4-204ENST00000431283 KIR2DL3P43628 341 aa6.8□□□□□ -1.32
PTPN4-204ENST00000431283 PURAQ00577 322 aaKnown RBP6.8□□□□□ -1.32
PTPN4-204ENST00000431283 ESRP1Q6NXG1 681 aaKnown RBP6.8□□□□□ -1.32
PTPN4-204ENST00000431283 Q6ZRM9 215 aa6.8□□□□□ -1.32
PTPN4-204ENST00000431283 KIF18BQ86Y91 864 aa6.8□□□□□ -1.32
PTPN4-204ENST00000431283 CMTM4Q8IZR5 234 aa6.8□□□□□ -1.32
PTPN4-204ENST00000431283 MB21D1Q8N884 522 aa6.8□□□□□ -1.32
PTPN4-204ENST00000431283 ATXN2LQ8WWM7 1075 aaKnown RBP6.8□□□□□ -1.32
PTPN4-204ENST00000431283 FERMT2Q96AC1 680 aa6.8□□□□□ -1.32
PTPN4-204ENST00000431283 PITHD1Q9GZP4 211 aaPredicted RBP6.8□□□□□ -1.32
PTPN4-204ENST00000431283 SLC2A4RGQ9NR83 387 aa6.8□□□□□ -1.32
PTPN4-204ENST00000431283 C11orf21Q9P2W6 132 aa6.8□□□□□ -1.32
PTPN4-204ENST00000431283 HECAQ9UBI9 543 aaPredicted RBP6.8□□□□□ -1.32
PTPN4-204ENST00000431283 A0A087X1B8 175 aa6.79□□□□□ -1.32
PTPN4-204ENST00000431283 NRP1O14786 923 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms