RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 EDAQ92838 391 aa16.97■□□□□ 0.31
PTCD1-204ENST00000430982 ZNF668Q96K58 619 aaPredicted RBP16.97■□□□□ 0.31
PTCD1-204ENST00000430982 CCDC43Q96MW1 224 aaKnown RBP16.97■□□□□ 0.31
PTCD1-204ENST00000430982 SCLT1Q96NL6 688 aa16.97■□□□□ 0.31
PTCD1-204ENST00000430982 CEP89Q96ST8 783 aa16.97■□□□□ 0.31
PTCD1-204ENST00000430982 OSMRQ99650 979 aa16.97■□□□□ 0.31
PTCD1-204ENST00000430982 JPH2Q9BR39 696 aaPredicted RBP16.97■□□□□ 0.31
PTCD1-204ENST00000430982 AGO3Q9H9G7 860 aaKnown RBP16.97■□□□□ 0.31
PTCD1-204ENST00000430982 CDHR5Q9HBB8 845 aa16.97■□□□□ 0.31
PTCD1-204ENST00000430982 BMP2KQ9NSY1 1161 aaPredicted RBP16.97■□□□□ 0.31
PTCD1-204ENST00000430982 CLDND1Q9NY35 253 aa16.97■□□□□ 0.31
PTCD1-204ENST00000430982 KMT2EQ8IZD2 1858 aa16.97■□□□□ 0.31
PTCD1-204ENST00000430982 LAD1O00515 517 aa16.96■□□□□ 0.31
PTCD1-204ENST00000430982 MAFO75444 373 aaPredicted RBP16.96■□□□□ 0.31
PTCD1-204ENST00000430982 LYPLA2O95372 231 aa16.96■□□□□ 0.31
PTCD1-204ENST00000430982 DNM2P50570 870 aa16.96■□□□□ 0.31
PTCD1-204ENST00000430982 FXR2P51116 673 aaKnown RBP eCLIP16.96■□□□□ 0.31
PTCD1-204ENST00000430982 POLGP54098 1239 aaPredicted RBP16.96■□□□□ 0.31
PTCD1-204ENST00000430982 PTPN5P54829 565 aa16.96■□□□□ 0.31
PTCD1-204ENST00000430982 NLRP11P59045 1033 aaKnown RBP16.96■□□□□ 0.31
PTCD1-204ENST00000430982 DLX2Q07687 328 aaPredicted RBP16.96■□□□□ 0.31
PTCD1-204ENST00000430982 PAK2Q13177 524 aa16.96■□□□□ 0.31
PTCD1-204ENST00000430982 DRP2Q13474 957 aa16.96■□□□□ 0.31
PTCD1-204ENST00000430982 RNF135Q8IUD6 432 aa16.96■□□□□ 0.31
PTCD1-204ENST00000430982 SLC7A3Q8WY07 619 aa16.96■□□□□ 0.31
PTCD1-204ENST00000430982 YME1L1Q96TA2 773 aa16.96■□□□□ 0.31
PTCD1-204ENST00000430982 TUFT1Q9NNX1 390 aa16.96■□□□□ 0.31
PTCD1-204ENST00000430982 PPME1Q9Y570 386 aa16.96■□□□□ 0.31
PTCD1-204ENST00000430982 SQORQ9Y6N5 450 aa16.96■□□□□ 0.31
PTCD1-204ENST00000430982 CACNA1HO95180 2353 aa16.95■□□□□ 0.3
PTCD1-204ENST00000430982 A0A087WWV3 80 aa16.95■□□□□ 0.3
PTCD1-204ENST00000430982 IGKV6-21A0A0C4DH24 114 aa16.95■□□□□ 0.3
PTCD1-204ENST00000430982 GPR32O75388 356 aa16.95■□□□□ 0.3
PTCD1-204ENST00000430982 MED24O75448 989 aa16.95■□□□□ 0.3
PTCD1-204ENST00000430982 RPS6KA5O75582 802 aa16.95■□□□□ 0.3
PTCD1-204ENST00000430982 SPATA31C1P0DKV0 1188 aa16.95■□□□□ 0.3
PTCD1-204ENST00000430982 CRYBB1P53674 252 aaPredicted RBP16.95■□□□□ 0.3
PTCD1-204ENST00000430982 HYAL1Q12794 435 aa16.95■□□□□ 0.3
PTCD1-204ENST00000430982 NFX1Q12986 1120 aaKnown RBP16.95■□□□□ 0.3
PTCD1-204ENST00000430982 SMAD4Q13485 552 aaKnown RBP16.95■□□□□ 0.3
PTCD1-204ENST00000430982 DTHD1Q6ZMT9 781 aa16.95■□□□□ 0.3
PTCD1-204ENST00000430982 CATSPER3Q86XQ3 398 aa16.95■□□□□ 0.3
PTCD1-204ENST00000430982 SPRYD3Q8NCJ5 442 aa16.95■□□□□ 0.3
PTCD1-204ENST00000430982 PIGOQ8TEQ8 1089 aa16.95■□□□□ 0.3
PTCD1-204ENST00000430982 PRRX2Q99811 253 aa16.95■□□□□ 0.3
PTCD1-204ENST00000430982 POLR3CQ9BUI4 534 aaPredicted RBP16.95■□□□□ 0.3
PTCD1-204ENST00000430982 RAB34Q9BZG1 259 aa16.95■□□□□ 0.3
PTCD1-204ENST00000430982 LMAN2LQ9H0V9 348 aa16.95■□□□□ 0.3
PTCD1-204ENST00000430982 RC3H2Q9HBD1 1191 aaKnown RBP16.95■□□□□ 0.3
PTCD1-204ENST00000430982 ANKEF1Q9NU02 776 aa16.95■□□□□ 0.3
PTCD1-204ENST00000430982 SUCLA2Q9P2R7 463 aaPredicted RBP16.95■□□□□ 0.3
PTCD1-204ENST00000430982 LRWD1Q9UFC0 647 aa16.95■□□□□ 0.3
PTCD1-204ENST00000430982 PADI3Q9ULW8 664 aa16.95■□□□□ 0.3
PTCD1-204ENST00000430982 NOC2LQ9Y3T9 749 aaKnown RBP16.95■□□□□ 0.3
PTCD1-204ENST00000430982 ZDBF2Q9HCK1 2354 aa16.94■□□□□ 0.3
PTCD1-204ENST00000430982 STX6O43752 255 aa16.94■□□□□ 0.3
PTCD1-204ENST00000430982 TBX10O75333 385 aa16.94■□□□□ 0.3
PTCD1-204ENST00000430982 CCT6AP40227 531 aaKnown RBP16.94■□□□□ 0.3
PTCD1-204ENST00000430982 RFC5P40937 340 aa16.94■□□□□ 0.3
PTCD1-204ENST00000430982 PRPHP41219 470 aa16.94■□□□□ 0.3
PTCD1-204ENST00000430982 GPC3P51654 580 aa16.94■□□□□ 0.3
PTCD1-204ENST00000430982 ATP2C1P98194 919 aaPredicted RBP16.94■□□□□ 0.3
PTCD1-204ENST00000430982 TCF15Q12870 199 aa16.94■□□□□ 0.3
PTCD1-204ENST00000430982 RESTQ13127 1097 aa16.94■□□□□ 0.3
PTCD1-204ENST00000430982 IER5LQ5T953 404 aa16.94■□□□□ 0.3
PTCD1-204ENST00000430982 HAUS3Q68CZ6 603 aa16.94■□□□□ 0.3
PTCD1-204ENST00000430982 EXOC8Q8IYI6 725 aa16.94■□□□□ 0.3
PTCD1-204ENST00000430982 TMEM40Q8WWA1 233 aa16.94■□□□□ 0.3
PTCD1-204ENST00000430982 NLRP7Q8WX94 980 aa16.94■□□□□ 0.3
PTCD1-204ENST00000430982 ADAMTS10Q9H324 1103 aa16.94■□□□□ 0.3
PTCD1-204ENST00000430982 MTMR6Q9Y217 621 aa16.94■□□□□ 0.3
PTCD1-204ENST00000430982 UPP2O95045 317 aa16.93■□□□□ 0.3
PTCD1-204ENST00000430982 RB1P06400 928 aa16.93■□□□□ 0.3
PTCD1-204ENST00000430982 RPA1P27694 616 aa16.93■□□□□ 0.3
PTCD1-204ENST00000430982 PDIA5Q14554 519 aa16.93■□□□□ 0.3
PTCD1-204ENST00000430982 EMC2Q15006 297 aa16.93■□□□□ 0.3
PTCD1-204ENST00000430982 IL17AQ16552 155 aa16.93■□□□□ 0.3
PTCD1-204ENST00000430982 ODR4Q5SWX8 454 aa16.93■□□□□ 0.3
PTCD1-204ENST00000430982 POTEGQ6S5H5 508 aa16.93■□□□□ 0.3
PTCD1-204ENST00000430982 RHPN2Q8IUC4 686 aa16.93■□□□□ 0.3
PTCD1-204ENST00000430982 ZNF710Q8N1W2 664 aa16.93■□□□□ 0.3
PTCD1-204ENST00000430982 SNX29Q8TEQ0 813 aa16.93■□□□□ 0.3
PTCD1-204ENST00000430982 TMEM143Q96AN5 459 aa16.93■□□□□ 0.3
PTCD1-204ENST00000430982 DHX33Q9H6R0 707 aaKnown RBP16.93■□□□□ 0.3
PTCD1-204ENST00000430982 ERVK-5Q9HDB9 667 aa16.93■□□□□ 0.3
PTCD1-204ENST00000430982 PP2D1A8MPX8 630 aa16.92■□□□□ 0.3
PTCD1-204ENST00000430982 ENPP3O14638 875 aa16.92■□□□□ 0.3
PTCD1-204ENST00000430982 GPR182O15218 404 aa16.92■□□□□ 0.3
PTCD1-204ENST00000430982 EYA4O95677 639 aa16.92■□□□□ 0.3
PTCD1-204ENST00000430982 RARRES1P49788 294 aa16.92■□□□□ 0.3
PTCD1-204ENST00000430982 TRIM67Q6ZTA4 783 aa16.92■□□□□ 0.3
PTCD1-204ENST00000430982 EP400NLQ6ZTU2 488 aa16.92■□□□□ 0.3
PTCD1-204ENST00000430982 FAM228AQ86W67 206 aa16.92■□□□□ 0.3
PTCD1-204ENST00000430982 IGSF22Q8N9C0 903 aa16.92■□□□□ 0.3
PTCD1-204ENST00000430982 CLP1Q92989 425 aaKnown RBP16.92■□□□□ 0.3
PTCD1-204ENST00000430982 NLRP4Q96MN2 994 aa16.92■□□□□ 0.3
PTCD1-204ENST00000430982 NACC1Q96RE7 527 aa16.92■□□□□ 0.3
PTCD1-204ENST00000430982 MTRQ99707 1265 aa16.92■□□□□ 0.3
PTCD1-204ENST00000430982 FTHL17Q9BXU8 183 aa16.92■□□□□ 0.3
PTCD1-204ENST00000430982 ATP6V0A4Q9HBG4 840 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms