RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 PTPN22Q9Y2R2 807 aa11.96□□□□□ -0.5
SEMA4D-209ENST00000429836 O00370 1275 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 GFPT2O94808 682 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 TDP2O95551 362 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 IGHMBP2P38935 993 aaKnown RBP11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 PTGIRP43119 386 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 CALCRLQ16602 461 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 KRT25Q7Z3Z0 450 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 VSIG1Q86XK7 387 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 RPUSD2Q8IZ73 545 aaKnown RBP11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 DNAJC9Q8WXX5 260 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 DNAJC19Q96DA6 116 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 ZHX3Q9H4I2 956 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 DCP1AQ9NPI6 582 aaPredicted RBP11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 PCMTD2Q9NV79 361 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 DNAJC17Q9NVM6 304 aaKnown RBP11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 RGL1Q9NZL6 768 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 SLAIN2Q9P270 581 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 ARPP21Q9UBL0 812 aaPredicted RBP11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 ARMCX3Q9UH62 379 aaPredicted RBP11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 CNOT7Q9UIV1 285 aaKnown RBP11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 ARAP2Q8WZ64 1704 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 FAM187AA6NFU0 413 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 SMAPO00193 183 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 AFPP02771 609 aaKnown RBP11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 USP4Q13107 963 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 DCAF17Q5H9S7 520 aaPredicted RBP11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 FOXB2Q5VYV0 432 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 TTC27Q6P3X3 843 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 ZNF449Q6P9G9 518 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 CKAP2Q8WWK9 683 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 ERP27Q96DN0 273 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 DYNLL2Q96FJ2 89 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 GORASP1Q9BQQ3 440 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 PPP1R12CQ9BZL4 782 aa11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 STMN4Q9H169 189 aaPredicted RBP11.95□□□□□ -0.5
SEMA4D-209ENST00000429836 PON1P27169 355 aa11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 EPHB2P29323 1055 aa11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 CNGA1P29973 690 aa11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 GRM4Q14833 912 aa11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 LLGL1Q15334 1064 aa11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 GLYCTKQ8IVS8 523 aa11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 LNX1Q8TBB1 728 aaPredicted RBP11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 ASAP3Q8TDY4 903 aa11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 CEP63Q96MT8 703 aa11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 MTRF1LQ9UGC7 380 aaKnown RBP11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 NENFQ9UMX5 172 aa11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 COL1A1P02452 1464 aaPredicted RBP11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 PCDH11XQ9BZA7 1347 aa11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 PCDH11YQ9BZA8 1340 aa11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 USP17L8P0C7I0 530 aa11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 STX2P32856 288 aa11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 MARCKSL1P49006 195 aa11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 CHRNDQ07001 517 aa11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 LBRQ14739 615 aaKnown RBP11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 MUM1Q2TAK8 710 aa11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 TCERG1LQ5VWI1 586 aa11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 BTNL9Q6UXG8 535 aa11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 INTS8Q75QN2 995 aaKnown RBP11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 ZDHHC14Q8IZN3 488 aa11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 ARHGEF26Q96DR7 871 aa11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 TBK1Q9UHD2 729 aa11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 RASAL2Q9UJF2 1139 aa11.94□□□□□ -0.5
SEMA4D-209ENST00000429836 NR2F2P24468 414 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 KCNJ1P48048 391 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 DHX34Q14147 1143 aaKnown RBP11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 EXOC3L4Q17RC7 722 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 ARHGAP22Q7Z5H3 698 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 PRELID2Q8N945 189 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 SCFD1Q8WVM8 642 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 KIFAP3Q92845 792 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 ANKRD27Q96NW4 1050 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 POP1Q99575 1024 aaKnown RBP11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 PAIP2Q9BPZ3 127 aaKnown RBP11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 TMEM109Q9BVC6 243 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 KIAA1683Q9H0B3 1180 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 LMCD1Q9NZU5 365 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 TTC7AQ9ULT0 858 aaPredicted RBP11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 STX8Q9UNK0 236 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 BZW2Q9Y6E2 419 aaKnown RBP11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 TMEM110-MUSTN1A8MSY1 372 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 PCP11498 1178 aaKnown RBP11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 BRAFP15056 766 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 SGSM1Q2NKQ1 1148 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 TSNAXIP1Q2TAA8 658 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 HERC4Q5GLZ8 1057 aaPredicted RBP11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 KRT79Q5XKE5 535 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 OR52E8Q6IFG1 317 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 GALNT17Q6IS24 598 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 MTMR9Q96QG7 549 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 TBC1D10AQ9BXI6 508 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 CDC42EP4Q9H3Q1 356 aaKnown RBP11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 TXLNGQ9NUQ3 528 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 TCRBV7S2A1N4TA0A589 114 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 E9PMD0 336 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 FOXN2P32314 431 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 MFSD5Q6N075 450 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 VPS36Q86VN1 386 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 CYP4X1Q8N118 509 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 ZFAND2BQ8WV99 257 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms