RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 IFNLR1Q8IU57 520 aaPredicted RBP19.39■□□□□ 0.69
CTSD-203ENST00000429746 PSPC1Q8WXF1 523 aaKnown RBP19.39■□□□□ 0.69
CTSD-203ENST00000429746 RAD9AQ99638 391 aa19.39■□□□□ 0.69
CTSD-203ENST00000429746 ZSCAN16Q9H4T2 348 aaPredicted RBP19.39■□□□□ 0.69
CTSD-203ENST00000429746 ATP6V0A4Q9HBG4 840 aa19.39■□□□□ 0.69
CTSD-203ENST00000429746 TTC28Q96AY4 2481 aa19.39■□□□□ 0.69
CTSD-203ENST00000429746 LINC01553A4QN01 128 aa19.38■□□□□ 0.69
CTSD-203ENST00000429746 GPR182O15218 404 aa19.38■□□□□ 0.69
CTSD-203ENST00000429746 TLL1O43897 1013 aa19.38■□□□□ 0.69
CTSD-203ENST00000429746 BMP15O95972 392 aa19.38■□□□□ 0.69
CTSD-203ENST00000429746 ZSCAN22P10073 491 aaPredicted RBP19.38■□□□□ 0.69
CTSD-203ENST00000429746 NASPP49321 788 aaPredicted RBP19.38■□□□□ 0.69
CTSD-203ENST00000429746 DNM2P50570 870 aa19.38■□□□□ 0.69
CTSD-203ENST00000429746 USP49Q70CQ1 688 aa19.38■□□□□ 0.69
CTSD-203ENST00000429746 EXOC8Q8IYI6 725 aa19.38■□□□□ 0.69
CTSD-203ENST00000429746 NLRP7Q8WX94 980 aa19.38■□□□□ 0.69
CTSD-203ENST00000429746 BSNDQ8WZ55 320 aa19.38■□□□□ 0.69
CTSD-203ENST00000429746 NLRP4Q96MN2 994 aa19.38■□□□□ 0.69
CTSD-203ENST00000429746 ADAM2Q99965 735 aa19.38■□□□□ 0.69
CTSD-203ENST00000429746 RNF19AQ9NV58 838 aa19.38■□□□□ 0.69
CTSD-203ENST00000429746 ATG2AQ2TAZ0 1938 aa19.37■□□□□ 0.69
CTSD-203ENST00000429746 RALGAPA2Q2PPJ7 1873 aa19.37■□□□□ 0.69
CTSD-203ENST00000429746 EYA4O95677 639 aa19.37■□□□□ 0.69
CTSD-203ENST00000429746 ATF7P17544 494 aaPredicted RBP19.37■□□□□ 0.69
CTSD-203ENST00000429746 CYP11B2P19099 503 aa19.37■□□□□ 0.69
CTSD-203ENST00000429746 CDC42EP1Q00587 391 aa19.37■□□□□ 0.69
CTSD-203ENST00000429746 ADGRE1Q14246 886 aa19.37■□□□□ 0.69
CTSD-203ENST00000429746 AMHR2Q16671 573 aa19.37■□□□□ 0.69
CTSD-203ENST00000429746 PADI6Q6TGC4 694 aa19.37■□□□□ 0.69
CTSD-203ENST00000429746 FAM43BQ6ZT52 329 aaPredicted RBP19.37■□□□□ 0.69
CTSD-203ENST00000429746 DAW1Q8N136 415 aa19.37■□□□□ 0.69
CTSD-203ENST00000429746 TCP11Q8WWU5 503 aa19.37■□□□□ 0.69
CTSD-203ENST00000429746 SYMPKQ92797 1274 aaKnown RBP19.37■□□□□ 0.69
CTSD-203ENST00000429746 RAB34Q9BZG1 259 aa19.37■□□□□ 0.69
CTSD-203ENST00000429746 BHMT2Q9H2M3 363 aa19.37■□□□□ 0.69
CTSD-203ENST00000429746 DGKIO75912 1065 aa19.36■□□□□ 0.69
CTSD-203ENST00000429746 UPP2O95045 317 aa19.36■□□□□ 0.69
CTSD-203ENST00000429746 F13A1P00488 732 aa19.36■□□□□ 0.69
CTSD-203ENST00000429746 MARCKSP29966 332 aaPredicted RBP19.36■□□□□ 0.69
CTSD-203ENST00000429746 HOXA11P31270 313 aaPredicted RBP19.36■□□□□ 0.69
CTSD-203ENST00000429746 PTENP60484 403 aa19.36■□□□□ 0.69
CTSD-203ENST00000429746 POU5F1BQ06416 359 aa19.36■□□□□ 0.69
CTSD-203ENST00000429746 MAPK7Q13164 816 aa19.36■□□□□ 0.69
CTSD-203ENST00000429746 SLC39A14Q15043 492 aa19.36■□□□□ 0.69
CTSD-203ENST00000429746 KRT79Q5XKE5 535 aa19.36■□□□□ 0.69
CTSD-203ENST00000429746 AK8Q96MA6 479 aa19.36■□□□□ 0.69
CTSD-203ENST00000429746 RUSC1Q9BVN2 902 aa19.36■□□□□ 0.69
CTSD-203ENST00000429746 GCOM2Q9BZD3 368 aaPredicted RBP19.36■□□□□ 0.69
CTSD-203ENST00000429746 POLR3FQ9H1D9 316 aaPredicted RBP19.36■□□□□ 0.69
CTSD-203ENST00000429746 BLOC1S4Q9NUP1 217 aa19.36■□□□□ 0.69
CTSD-203ENST00000429746 SRPRBQ9Y5M8 271 aaKnown RBP19.36■□□□□ 0.69
CTSD-203ENST00000429746 STK24Q9Y6E0 443 aa19.36■□□□□ 0.69
CTSD-203ENST00000429746 ASAP2O43150 1006 aa19.35■□□□□ 0.69
CTSD-203ENST00000429746 SRGAP2CP0DJJ0 459 aa19.35■□□□□ 0.69
CTSD-203ENST00000429746 IGFBP4P22692 258 aa19.35■□□□□ 0.69
CTSD-203ENST00000429746 LONP1P36776 959 aaKnown RBP19.35■□□□□ 0.69
CTSD-203ENST00000429746 SARSP49591 514 aaKnown RBP19.35■□□□□ 0.69
CTSD-203ENST00000429746 GATMP50440 423 aa19.35■□□□□ 0.69
CTSD-203ENST00000429746 C1orf186Q6ZWK4 172 aa19.35■□□□□ 0.69
CTSD-203ENST00000429746 ZNF598Q86UK7 904 aaKnown RBP19.35■□□□□ 0.69
CTSD-203ENST00000429746 NPAS4Q8IUM7 802 aa19.35■□□□□ 0.69
CTSD-203ENST00000429746 RNF149Q8NC42 400 aa19.35■□□□□ 0.69
CTSD-203ENST00000429746 LINC00301Q8NCQ3 95 aa19.35■□□□□ 0.69
CTSD-203ENST00000429746 CLIC6Q96NY7 704 aa19.35■□□□□ 0.69
CTSD-203ENST00000429746 ZBED2Q9BTP6 218 aa19.35■□□□□ 0.69
CTSD-203ENST00000429746 TRAIPQ9BWF2 469 aa19.35■□□□□ 0.69
CTSD-203ENST00000429746 COL25A1Q9BXS0 654 aaPredicted RBP19.35■□□□□ 0.69
CTSD-203ENST00000429746 NFKBIZQ9BYH8 718 aa19.35■□□□□ 0.69
CTSD-203ENST00000429746 CSRNP2Q9H175 543 aa19.35■□□□□ 0.69
CTSD-203ENST00000429746 POLD4Q9HCU8 107 aa19.35■□□□□ 0.69
CTSD-203ENST00000429746 INSL6Q9Y581 213 aa19.35■□□□□ 0.69
CTSD-203ENST00000429746 ADGRA3Q8IWK6 1321 aa19.34■□□□□ 0.69
CTSD-203ENST00000429746 ARHGEF35A5YM69 484 aa19.34■□□□□ 0.69
CTSD-203ENST00000429746 GTPBP6O43824 516 aaPredicted RBP19.34■□□□□ 0.69
CTSD-203ENST00000429746 LPXNO60711 386 aa19.34■□□□□ 0.69
CTSD-203ENST00000429746 BRD1O95696 1058 aa19.34■□□□□ 0.69
CTSD-203ENST00000429746 EDN1P05305 212 aa19.34■□□□□ 0.69
CTSD-203ENST00000429746 DDIT3P35638 169 aa19.34■□□□□ 0.69
CTSD-203ENST00000429746 SLC12A3P55017 1021 aa19.34■□□□□ 0.69
CTSD-203ENST00000429746 CEBPZQ03701 1054 aaKnown RBP19.34■□□□□ 0.69
CTSD-203ENST00000429746 MBTD1Q05BQ5 628 aa19.34■□□□□ 0.69
CTSD-203ENST00000429746 MXD4Q14582 209 aaPredicted RBP19.34■□□□□ 0.69
CTSD-203ENST00000429746 FOXD4L5Q5VV16 416 aaPredicted RBP19.34■□□□□ 0.69
CTSD-203ENST00000429746 CDCA2Q69YH5 1023 aaPredicted RBP19.34■□□□□ 0.69
CTSD-203ENST00000429746 SLC24A5Q71RS6 500 aa19.34■□□□□ 0.69
CTSD-203ENST00000429746 SRGAP1Q7Z6B7 1085 aa19.34■□□□□ 0.69
CTSD-203ENST00000429746 CABP7Q86V35 215 aa19.34■□□□□ 0.69
CTSD-203ENST00000429746 MCPH1Q8NEM0 835 aa19.34■□□□□ 0.69
CTSD-203ENST00000429746 ATXN2LQ8WWM7 1075 aaKnown RBP19.34■□□□□ 0.69
CTSD-203ENST00000429746 FOXD4L4Q8WXT5 416 aaPredicted RBP19.34■□□□□ 0.69
CTSD-203ENST00000429746 EPSTI1Q96J88 318 aa19.34■□□□□ 0.69
CTSD-203ENST00000429746 AGPAT5Q9NUQ2 364 aa19.34■□□□□ 0.69
CTSD-203ENST00000429746 RFXAPO00287 272 aa19.33■□□□□ 0.68
CTSD-203ENST00000429746 SLC26A4O43511 780 aa19.33■□□□□ 0.68
CTSD-203ENST00000429746 ERVK-21P61565 698 aa19.33■□□□□ 0.68
CTSD-203ENST00000429746 SPECC1Q5M775 1068 aa19.33■□□□□ 0.68
CTSD-203ENST00000429746 ODR4Q5SWX8 454 aa19.33■□□□□ 0.68
CTSD-203ENST00000429746 UBXN11Q5T124 520 aa19.33■□□□□ 0.68
CTSD-203ENST00000429746 RINT1Q6NUQ1 792 aa19.33■□□□□ 0.68
CTSD-203ENST00000429746 MAEAQ7L5Y9 396 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms