RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 ZC3H3Q8IXZ2 948 aaKnown RBP9.78□□□□□ -0.84
SMC6-204ENST00000428868 CSGALNACT2Q8N6G5 542 aa9.78□□□□□ -0.84
SMC6-204ENST00000428868 RAET1EQ8TD07 263 aa9.78□□□□□ -0.84
SMC6-204ENST00000428868 KIFAP3Q92845 792 aa9.78□□□□□ -0.84
SMC6-204ENST00000428868 CNOT6LQ96LI5 555 aaKnown RBP9.78□□□□□ -0.84
SMC6-204ENST00000428868 PPP1R9BQ96SB3 815 aa9.78□□□□□ -0.84
SMC6-204ENST00000428868 PPP1R16BQ96T49 567 aa9.78□□□□□ -0.84
SMC6-204ENST00000428868 MCOLN1Q9GZU1 580 aa9.78□□□□□ -0.84
SMC6-204ENST00000428868 AP5M1Q9H0R1 490 aa9.78□□□□□ -0.84
SMC6-204ENST00000428868 SUGCTQ9HAC7 445 aa9.78□□□□□ -0.84
SMC6-204ENST00000428868 KMT5AQ9NQR1 393 aa9.78□□□□□ -0.84
SMC6-204ENST00000428868 SETD4Q9NVD3 440 aa9.78□□□□□ -0.84
SMC6-204ENST00000428868 LARSQ9P2J5 1176 aaKnown RBP9.78□□□□□ -0.84
SMC6-204ENST00000428868 NRBP1Q9UHY1 535 aa9.78□□□□□ -0.84
SMC6-204ENST00000428868 TRIM17Q9Y577 477 aa9.78□□□□□ -0.84
SMC6-204ENST00000428868 UBE4BO95155 1302 aa9.78□□□□□ -0.84
SMC6-204ENST00000428868 COL1A2P08123 1366 aa9.77□□□□□ -0.84
SMC6-204ENST00000428868 TANC1Q9C0D5 1861 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 BICDL2A1A5D9 508 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 DENND3A2RUS2 1198 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 TTLL13PA6NNM8 815 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 ANKRD63C9JTQ0 380 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 SMIM10L2AP0DMW4 78 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 SMIM10L2BP0DMW5 78 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 KLRC1P26715 233 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 HOXD10P28358 340 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 PPP1R2P41236 205 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 CASP4P49662 377 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 CPT1AP50416 773 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 COPB1P53618 953 aaKnown RBP9.77□□□□□ -0.85
SMC6-204ENST00000428868 RTP1P59025 263 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 TPM4P67936 248 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 GTF2BQ00403 316 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 PURAQ00577 322 aaKnown RBP9.77□□□□□ -0.85
SMC6-204ENST00000428868 LRRC63Q05C16 580 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 PPFIA1Q13136 1202 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 DMP1Q13316 513 aaPredicted RBP9.77□□□□□ -0.85
SMC6-204ENST00000428868 MFSD10Q14728 455 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 KIAA0753Q2KHM9 967 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 TCP11X2Q5H9J9 407 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 ZNF484Q5JVG2 852 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 EFCAB12Q6NXP0 572 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 MTHFD1LQ6UB35 978 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 RUFY4Q6ZNE9 571 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 SPC24Q8NBT2 197 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 SH3TC2Q8TF17 1288 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 LMBR1Q8WVP7 490 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 SPIRE2Q8WWL2 714 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 PRPF31Q8WWY3 499 aaKnown RBP9.77□□□□□ -0.85
SMC6-204ENST00000428868 SLC7A3Q8WY07 619 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 GTPBP4Q9BZE4 634 aaKnown RBP9.77□□□□□ -0.85
SMC6-204ENST00000428868 VPS16Q9H269 839 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 ST6GALNAC4Q9H4F1 302 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 THAP9Q9H5L6 903 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 TYW1Q9NV66 732 aaKnown RBP9.77□□□□□ -0.85
SMC6-204ENST00000428868 ARHGAP28Q9P2N2 729 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 LIMA1Q9UHB6 759 aaKnown RBP9.77□□□□□ -0.85
SMC6-204ENST00000428868 ZNF215Q9UL58 517 aaPredicted RBP9.77□□□□□ -0.85
SMC6-204ENST00000428868 TRAF3IP3Q9Y228 551 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 Q9Y3F1 56 aa9.77□□□□□ -0.85
SMC6-204ENST00000428868 A0A1B0GTH6 734 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 LRRIQ4A6NIV6 560 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 PDXKO00764 312 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 SERPINC1P01008 464 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 VTNP04004 478 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 NR3C1P04150 777 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 RARBP10826 455 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 CDK11BP21127 795 aaKnown RBP9.76□□□□□ -0.85
SMC6-204ENST00000428868 NR2F2P24468 414 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 UBASH3AP57075 661 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 CCDC173Q0VFZ6 552 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 LAMTOR4Q0VGL1 99 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 MIIPQ5JXC2 388 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 CXCL17Q6UXB2 119 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 CREBRFQ8IUR6 639 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 MAP4K3Q8IVH8 894 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 METTL13Q8N6R0 699 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 KLHDC9Q8NEP7 349 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 PXYLP1Q8TE99 480 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 TSG101Q99816 390 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 CBWD1Q9BRT8 395 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 HAPLN2Q9GZV7 340 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 XPNPEP3Q9NQH7 507 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 AGPAT3Q9NRZ7 376 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 SUCLA2Q9P2R7 463 aaPredicted RBP9.76□□□□□ -0.85
SMC6-204ENST00000428868 TBX20Q9UMR3 447 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 PCDHB13Q9Y5F0 798 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 ALPK3Q96L96 1907 aa9.76□□□□□ -0.85
SMC6-204ENST00000428868 CSDE1O75534 798 aaKnown RBP9.75□□□□□ -0.85
SMC6-204ENST00000428868 MYCP01106 439 aaPredicted RBP9.75□□□□□ -0.85
SMC6-204ENST00000428868 GNRH1P01148 92 aa9.75□□□□□ -0.85
SMC6-204ENST00000428868 MYCNP04198 464 aaPredicted RBP9.75□□□□□ -0.85
SMC6-204ENST00000428868 SRGAP2CP0DJJ0 459 aa9.75□□□□□ -0.85
SMC6-204ENST00000428868 GRK4P32298 578 aa9.75□□□□□ -0.85
SMC6-204ENST00000428868 NAMPTP43490 491 aa9.75□□□□□ -0.85
SMC6-204ENST00000428868 CYP2J2P51589 502 aa9.75□□□□□ -0.85
SMC6-204ENST00000428868 NKX3-2P78367 333 aa9.75□□□□□ -0.85
SMC6-204ENST00000428868 ADAM17P78536 824 aa9.75□□□□□ -0.85
SMC6-204ENST00000428868 GOLGA8FQ08AF8 430 aa9.75□□□□□ -0.85
SMC6-204ENST00000428868 GOLGA8DPQ0D2H9 430 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms