RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 CYP2C9P11712 490 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 PSEN2P49810 448 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 APBA1Q02410 837 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 GOLGA8FQ08AF8 430 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 GOLGA8DPQ0D2H9 430 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 ZBTB41Q5SVQ8 909 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 OTUD6AQ7L8S5 288 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 PLPPR4Q7Z2D5 763 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 CCDC65Q8IXS2 484 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 MSL3Q8N5Y2 521 aaKnown RBP10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 FAM200AQ8TCP9 573 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 BBXQ8WY36 941 aaPredicted RBP10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 EMID1Q96A84 441 aaPredicted RBP10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 FDXACB1Q9BRP7 624 aaPredicted RBP10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 ATP6V0A4Q9HBG4 840 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 TET1Q8NFU7 2136 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 FRMD3A2A2Y4 597 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 DENND3A2RUS2 1198 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 BECN2A8MW95 431 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 LRRN2O75325 713 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 GJA9P57773 515 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 LAMTOR4Q0VGL1 99 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 CCSAPQ6IQ19 270 aaPredicted RBP10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 NFRKBQ6P4R8 1299 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 MTHFD1LQ6UB35 978 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 ZNF720Q7Z2F6 126 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 HAUS6Q7Z4H7 955 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 IRF2BP1Q8IU81 584 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 SAAL1Q96ER3 474 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 CBWD1Q9BRT8 395 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 NIFKQ9BYG3 293 aaKnown RBP10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 HAPLN2Q9GZV7 340 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 CXCL16Q9H2A7 254 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 NRBP2Q9NSY0 501 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 ANKEF1Q9NU02 776 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 SUCLA2Q9P2R7 463 aaPredicted RBP10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 TGFB1I1O43294 461 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 DGAT1O75907 488 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 GUCY2CP25092 1073 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 CPT1AP50416 773 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 CYP2J2P51589 502 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 ACLYP53396 1101 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 NLRP11P59045 1033 aaKnown RBP10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 OSTNP61366 133 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 C7orf31Q8N865 590 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 TMEM161BQ8NDZ6 487 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 RDM1Q8NG50 284 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 NEK9Q8TD19 979 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 PXYLP1Q8TE99 480 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 CPB2Q96IY4 423 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 OSMRQ99650 979 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 SRRTQ9BXP5 876 aaKnown RBP10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 SCN10AQ9Y5Y9 1956 aa10.49□□□□□ -0.73
HMGCLL1-206ENST00000428842 RRP9O43818 475 aaKnown RBP10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 MAFO75444 373 aaPredicted RBP10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 PLS3P13797 630 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 WNT7BP56706 349 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 PAK1Q13153 545 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 SLC39A4Q6P5W5 647 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 KIAA0319LQ8IZA0 1049 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 CEP120Q8N960 986 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 SPC24Q8NBT2 197 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 SLAIN1Q8ND83 568 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 MMRN2Q9H8L6 949 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 KMT5AQ9NQR1 393 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 COL4A3BPQ9Y5P4 624 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 FRMPD3Q5JV73 1810 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 ZNF131P52739 623 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 KCNB1Q14721 858 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 TTI2Q6NXR4 508 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 CNNM4Q6P4Q7 775 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 ZBTB33Q86T24 672 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 MYOCDQ8IZQ8 938 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 SCLT1Q96NL6 688 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 TARS2Q9BW92 718 aaKnown RBP10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 SENP6Q9GZR1 1112 aaPredicted RBP10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 MAF1Q9H063 256 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 KCTD10Q9H3F6 313 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 ANKFY1Q9P2R3 1169 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 ZNF215Q9UL58 517 aaPredicted RBP10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 UMODL1Q5DID0 1318 aa10.48□□□□□ -0.73
HMGCLL1-206ENST00000428842 TRANK1O15050 2925 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 LOC102724159A0A0B4J2E5 919 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 PVALEFA0A1B0GWK0 134 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 A0A1W2PQ45 241 aaPredicted RBP10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 A0A1W2PQY0 241 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 INO80B-WBP1J3KQ70 363 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 PES1O00541 588 aaKnown RBP10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 TEX33O43247 280 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 HBP1O60381 514 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 HOXD8P13378 290 aaPredicted RBP10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 ADSSP30520 456 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 KLK7P49862 253 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 CDR1P51861 262 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 SPAG1Q07617 926 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 PWP2Q15269 919 aaKnown RBP10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 LMBRD2Q68DH5 695 aaPredicted RBP10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 EPM2AIP1Q7L775 607 aaPredicted RBP10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 TMEM192Q8IY95 271 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 KLHDC9Q8NEP7 349 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms