RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 GGCXP38435 758 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 TKFCQ3LXA3 575 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 CHADLQ6NUI6 762 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 DPH6Q7L8W6 267 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 RTKN2Q8IZC4 609 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 PLEKHO2Q8TD55 490 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 CRYGNQ8WXF5 182 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 ARHGEF26Q96DR7 871 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 CLMNQ96JQ2 1002 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 CEP170P1Q96L14 293 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 ADAM33Q9BZ11 813 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 ANKFY1Q9P2R3 1169 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 SEPT9Q9UHD8 586 aaPredicted RBP9.11□□□□□ -0.95
CD44-208ENST00000428726 FEZ2Q9UHY8 353 aaPredicted RBP9.11□□□□□ -0.95
CD44-208ENST00000428726 HERC5Q9UII4 1024 aaKnown RBP9.11□□□□□ -0.95
CD44-208ENST00000428726 MARCKSL1P49006 195 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 ORC1Q13415 861 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 PHLDB3Q6NSJ2 640 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 HS2ST1Q7LGA3 356 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 PRPF38AQ8NAV1 312 aaKnown RBP9.11□□□□□ -0.95
CD44-208ENST00000428726 CLEC4DQ8WXI8 215 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 BSNDQ8WZ55 320 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 MBOAT7Q96N66 472 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 MXRA8Q9BRK3 442 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 TRIM7Q9C029 511 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 AGPAT3Q9NRZ7 376 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 SNX12Q9UMY4 172 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 PDE4DIPQ5VU43 2346 aa9.11□□□□□ -0.95
CD44-208ENST00000428726 PHF20L1A8MW92 1017 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 MYO1CO00159 1063 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 YWHABP31946 246 aaKnown RBP9.1□□□□□ -0.95
CD44-208ENST00000428726 SSR1P43307 286 aaKnown RBP9.1□□□□□ -0.95
CD44-208ENST00000428726 VPS41P49754 854 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 IGBP1P78318 339 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 DRP2Q13474 957 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 ZBTB41Q5SVQ8 909 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 GADL1Q6ZQY3 521 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 ZNF720Q7Z2F6 126 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 ZBTB33Q86T24 672 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 TSEN2Q8NCE0 465 aaKnown RBP9.1□□□□□ -0.95
CD44-208ENST00000428726 TRAPPC12Q8WVT3 735 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 OTUD5Q96G74 571 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 NOX5Q96PH1 765 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 GBP3Q9H0R5 595 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 ARFGEF1Q9Y6D6 1849 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 CCDC151A5D8V7 595 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 TTLL13PA6NNM8 815 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 DDX3XO00571 662 aaKnown RBP eCLIP9.1□□□□□ -0.95
CD44-208ENST00000428726 TBX3O15119 743 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 CYP26A1O43174 497 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 FOSP01100 380 aaPredicted RBP9.1□□□□□ -0.95
CD44-208ENST00000428726 KRT5P13647 590 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 HNRNPH3P31942 346 aaKnown RBP9.1□□□□□ -0.95
CD44-208ENST00000428726 PSMC4P43686 418 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 HIRAP54198 1017 aaPredicted RBP9.1□□□□□ -0.95
CD44-208ENST00000428726 SP2Q02086 613 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 BRD3Q15059 726 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 TREML2Q5T2D2 321 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 LEKR1Q6ZMV7 388 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 NCAPG2Q86XI2 1143 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 SUPT20HQ8NEM7 779 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 FAM20AQ96MK3 541 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 TEPSINQ96N21 525 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 THAP2Q9H0W7 228 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 GANQ9H2C0 597 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 LRRC4CQ9HCJ2 640 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 AMACRQ9UHK6 382 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 FRMD4BQ9Y2L6 1034 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 PTPN22Q9Y2R2 807 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 GRID2IPA4D2P6 1211 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 CALUO43852 315 aaPredicted RBP9.1□□□□□ -0.95
CD44-208ENST00000428726 USP14P54578 494 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 GALCP54803 685 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 WNT7BP56706 349 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 MESDQ14696 234 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 Q4G0T1 1027 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 ZFYVE27Q5T4F4 411 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 GBP6Q6ZN66 633 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 HAUS6Q7Z4H7 955 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 IRF2BP2Q7Z5L9 587 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 TATDN2Q93075 761 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 ALS2CR12Q96Q35 445 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 FAM213AQ9BRX8 229 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 SELENOOQ9BVL4 669 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 EDEM3Q9BZQ6 932 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 PICK1Q9NRD5 415 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 KLHL11Q9NVR0 708 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 CEP72Q9P209 647 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 L1RE1Q9UN81 338 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 STK24Q9Y6E0 443 aa9.1□□□□□ -0.95
CD44-208ENST00000428726 ATRNL1Q5VV63 1379 aa9.09□□□□□ -0.95
CD44-208ENST00000428726 ZMYM2Q9UBW7 1377 aa9.09□□□□□ -0.95
CD44-208ENST00000428726 CDH23Q9H251 3354 aa9.09□□□□□ -0.95
CD44-208ENST00000428726 DENND3A2RUS2 1198 aa9.09□□□□□ -0.95
CD44-208ENST00000428726 FOXO6A8MYZ6 492 aa9.09□□□□□ -0.95
CD44-208ENST00000428726 ZNF862O60290 1169 aa9.09□□□□□ -0.95
CD44-208ENST00000428726 EIF3JO75822 258 aaKnown RBP9.09□□□□□ -0.95
CD44-208ENST00000428726 HEXIM1O94992 359 aaKnown RBP9.09□□□□□ -0.95
CD44-208ENST00000428726 SGPL1O95470 568 aa9.09□□□□□ -0.95
CD44-208ENST00000428726 SERPING1P05155 500 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms