RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 RNF149Q8NC42 400 aa18.57■□□□□ 0.56
VRK2-204ENST00000428021 ASAP3Q8TDY4 903 aa18.57■□□□□ 0.56
VRK2-204ENST00000428021 SNX29Q8TEQ0 813 aa18.57■□□□□ 0.56
VRK2-204ENST00000428021 CCDC43Q96MW1 224 aaKnown RBP18.57■□□□□ 0.56
VRK2-204ENST00000428021 INO80BQ9C086 356 aaPredicted RBP18.57■□□□□ 0.56
VRK2-204ENST00000428021 KIAA1024Q9UPX6 916 aa18.57■□□□□ 0.56
VRK2-204ENST00000428021 STK24Q9Y6E0 443 aa18.57■□□□□ 0.56
VRK2-204ENST00000428021 COL4A4P53420 1690 aaPredicted RBP18.57■□□□□ 0.56
VRK2-204ENST00000428021 NLRC5Q86WI3 1866 aa18.56■□□□□ 0.56
VRK2-204ENST00000428021 VWA3AA6NCI4 1184 aa18.56■□□□□ 0.56
VRK2-204ENST00000428021 STX6O43752 255 aa18.56■□□□□ 0.56
VRK2-204ENST00000428021 ZSCAN20P17040 1043 aaPredicted RBP18.56■□□□□ 0.56
VRK2-204ENST00000428021 POU3F3P20264 500 aaPredicted RBP18.56■□□□□ 0.56
VRK2-204ENST00000428021 IGFBP4P22692 258 aa18.56■□□□□ 0.56
VRK2-204ENST00000428021 SFPQP23246 707 aaKnown RBP eCLIP18.56■□□□□ 0.56
VRK2-204ENST00000428021 GLRA2P23416 452 aa18.56■□□□□ 0.56
VRK2-204ENST00000428021 GRB10Q13322 594 aa18.56■□□□□ 0.56
VRK2-204ENST00000428021 MXD4Q14582 209 aaPredicted RBP18.56■□□□□ 0.56
VRK2-204ENST00000428021 SF3A1Q15459 793 aaKnown RBP18.56■□□□□ 0.56
VRK2-204ENST00000428021 FAM173BQ6P4H8 233 aa18.56■□□□□ 0.56
VRK2-204ENST00000428021 SRGAP1Q7Z6B7 1085 aa18.56■□□□□ 0.56
VRK2-204ENST00000428021 FIBCD1Q8N539 461 aa18.56■□□□□ 0.56
VRK2-204ENST00000428021 ELAC1Q9H777 363 aaKnown RBP18.56■□□□□ 0.56
VRK2-204ENST00000428021 GPRC5CQ9NQ84 441 aa18.56■□□□□ 0.56
VRK2-204ENST00000428021 DDX19AQ9NUU7 478 aaKnown RBP18.56■□□□□ 0.56
VRK2-204ENST00000428021 LRFN2Q9ULH4 789 aa18.56■□□□□ 0.56
VRK2-204ENST00000428021 PCDHB7Q9Y5E2 793 aa18.56■□□□□ 0.56
VRK2-204ENST00000428021 FNDC1Q4ZHG4 1894 aaPredicted RBP18.56■□□□□ 0.56
VRK2-204ENST00000428021 PRRC2BQ5JSZ5 2229 aaKnown RBP18.55■□□□□ 0.56
VRK2-204ENST00000428021 ARHGEF35A5YM69 484 aa18.55■□□□□ 0.56
VRK2-204ENST00000428021 CYP11B2P19099 503 aa18.55■□□□□ 0.56
VRK2-204ENST00000428021 IBSPP21815 317 aaPredicted RBP18.55■□□□□ 0.56
VRK2-204ENST00000428021 PTENP60484 403 aa18.55■□□□□ 0.56
VRK2-204ENST00000428021 CAPSQ13938 189 aa18.55■□□□□ 0.56
VRK2-204ENST00000428021 BTG3Q14201 252 aaPredicted RBP18.55■□□□□ 0.56
VRK2-204ENST00000428021 EPC2Q52LR7 807 aa18.55■□□□□ 0.56
VRK2-204ENST00000428021 FAM102BQ5T8I3 360 aa18.55■□□□□ 0.56
VRK2-204ENST00000428021 KRT79Q5XKE5 535 aa18.55■□□□□ 0.56
VRK2-204ENST00000428021 PADI6Q6TGC4 694 aa18.55■□□□□ 0.56
VRK2-204ENST00000428021 MAEAQ7L5Y9 396 aa18.55■□□□□ 0.56
VRK2-204ENST00000428021 IFNLR1Q8IU57 520 aaPredicted RBP18.55■□□□□ 0.56
VRK2-204ENST00000428021 TMEM192Q8IY95 271 aa18.55■□□□□ 0.56
VRK2-204ENST00000428021 CMTR2Q8IYT2 770 aaKnown RBP18.55■□□□□ 0.56
VRK2-204ENST00000428021 CLP1Q92989 425 aaKnown RBP18.55■□□□□ 0.56
VRK2-204ENST00000428021 POLR3FQ9H1D9 316 aaPredicted RBP18.55■□□□□ 0.56
VRK2-204ENST00000428021 CHST12Q9NRB3 414 aa18.55■□□□□ 0.56
VRK2-204ENST00000428021 RNF19AQ9NV58 838 aa18.55■□□□□ 0.56
VRK2-204ENST00000428021 TMEM161AQ9NX61 479 aa18.55■□□□□ 0.56
VRK2-204ENST00000428021 CLIC4Q9Y696 253 aa18.55■□□□□ 0.56
VRK2-204ENST00000428021 MTCH2Q9Y6C9 303 aa18.55■□□□□ 0.56
VRK2-204ENST00000428021 RALGAPA2Q2PPJ7 1873 aa18.54■□□□□ 0.56
VRK2-204ENST00000428021 A0A0U1RQF3 1178 aa18.54■□□□□ 0.56
VRK2-204ENST00000428021 BMP15O95972 392 aa18.54■□□□□ 0.56
VRK2-204ENST00000428021 GRIN1Q05586 938 aa18.54■□□□□ 0.56
VRK2-204ENST00000428021 POU5F1BQ06416 359 aa18.54■□□□□ 0.56
VRK2-204ENST00000428021 PTPAQ15257 358 aa18.54■□□□□ 0.56
VRK2-204ENST00000428021 HYIQ5T013 277 aa18.54■□□□□ 0.56
VRK2-204ENST00000428021 CATSPER4Q7RTX7 472 aa18.54■□□□□ 0.56
VRK2-204ENST00000428021 KCNK18Q7Z418 384 aa18.54■□□□□ 0.56
VRK2-204ENST00000428021 ZNF598Q86UK7 904 aaKnown RBP18.54■□□□□ 0.56
VRK2-204ENST00000428021 ECHDC2Q86YB7 292 aa18.54■□□□□ 0.56
VRK2-204ENST00000428021 MCPH1Q8NEM0 835 aa18.54■□□□□ 0.56
VRK2-204ENST00000428021 FBXO22Q8NEZ5 403 aa18.54■□□□□ 0.56
VRK2-204ENST00000428021 GDPD5Q8WTR4 605 aa18.54■□□□□ 0.56
VRK2-204ENST00000428021 SAMD11Q96NU1 681 aa18.54■□□□□ 0.56
VRK2-204ENST00000428021 PNMA5Q96PV4 448 aa18.54■□□□□ 0.56
VRK2-204ENST00000428021 TRAIPQ9BWF2 469 aa18.54■□□□□ 0.56
VRK2-204ENST00000428021 BHMT2Q9H2M3 363 aa18.54■□□□□ 0.56
VRK2-204ENST00000428021 AGPAT5Q9NUQ2 364 aa18.54■□□□□ 0.56
VRK2-204ENST00000428021 MRPL42Q9Y6G3 142 aaKnown RBP18.54■□□□□ 0.56
VRK2-204ENST00000428021 E9PMD0 336 aa18.53■□□□□ 0.56
VRK2-204ENST00000428021 EYA4O95677 639 aa18.53■□□□□ 0.56
VRK2-204ENST00000428021 FGFR1P11362 822 aa18.53■□□□□ 0.56
VRK2-204ENST00000428021 ATF7P17544 494 aaPredicted RBP18.53■□□□□ 0.56
VRK2-204ENST00000428021 HOXA11P31270 313 aaPredicted RBP18.53■□□□□ 0.56
VRK2-204ENST00000428021 PHKA2P46019 1235 aa18.53■□□□□ 0.56
VRK2-204ENST00000428021 PAN2Q504Q3 1202 aaKnown RBP18.53■□□□□ 0.56
VRK2-204ENST00000428021 RNF216Q9NWF9 866 aaPredicted RBP18.53■□□□□ 0.56
VRK2-204ENST00000428021 DACT1Q9NYF0 836 aa18.53■□□□□ 0.56
VRK2-204ENST00000428021 DNM3Q9UQ16 869 aa18.53■□□□□ 0.56
VRK2-204ENST00000428021 PIN4Q9Y237 131 aaKnown RBP18.53■□□□□ 0.56
VRK2-204ENST00000428021 KIAA1671Q9BY89 1806 aa18.53■□□□□ 0.56
VRK2-204ENST00000428021 UNC80Q8N2C7 3258 aa18.52■□□□□ 0.56
VRK2-204ENST00000428021 BMPR1AP36894 532 aa18.52■□□□□ 0.56
VRK2-204ENST00000428021 MBTD1Q05BQ5 628 aa18.52■□□□□ 0.56
VRK2-204ENST00000428021 TFDP1Q14186 410 aa18.52■□□□□ 0.56
VRK2-204ENST00000428021 BSNDQ8WZ55 320 aa18.52■□□□□ 0.56
VRK2-204ENST00000428021 NFKBIZQ9BYH8 718 aa18.52■□□□□ 0.56
VRK2-204ENST00000428021 ZSCAN16Q9H4T2 348 aaPredicted RBP18.52■□□□□ 0.56
VRK2-204ENST00000428021 POLD4Q9HCU8 107 aa18.52■□□□□ 0.56
VRK2-204ENST00000428021 C5orf67F2Z3F1 127 aa18.51■□□□□ 0.55
VRK2-204ENST00000428021 H3BNC9 293 aa18.51■□□□□ 0.55
VRK2-204ENST00000428021 EOMESO95936 686 aa18.51■□□□□ 0.55
VRK2-204ENST00000428021 AMHR2Q16671 573 aa18.51■□□□□ 0.55
VRK2-204ENST00000428021 TWF2Q6IBS0 349 aaKnown RBP18.51■□□□□ 0.55
VRK2-204ENST00000428021 AK8Q96MA6 479 aa18.51■□□□□ 0.55
VRK2-204ENST00000428021 CASD1Q96PB1 797 aa18.51■□□□□ 0.55
VRK2-204ENST00000428021 A0A0C4DFX4 3053 aa18.51■□□□□ 0.55
VRK2-204ENST00000428021 TBKBP1A7MCY6 615 aa18.5■□□□□ 0.55
VRK2-204ENST00000428021 TSPAN1O60635 241 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms