RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 TMEM143Q96AN5 459 aa20.58■□□□□ 0.89
PSPC1-202ENST00000427943 C8orf76Q96K31 380 aa20.58■□□□□ 0.89
PSPC1-202ENST00000427943 EIF2AK1Q9BQI3 630 aaKnown RBP20.58■□□□□ 0.89
PSPC1-202ENST00000427943 TMEM117Q9H0C3 514 aa20.58■□□□□ 0.89
PSPC1-202ENST00000427943 IGFLR1Q9H665 355 aa20.58■□□□□ 0.89
PSPC1-202ENST00000427943 DHX33Q9H6R0 707 aaKnown RBP20.58■□□□□ 0.89
PSPC1-202ENST00000427943 CWH43Q9H720 699 aa20.58■□□□□ 0.89
PSPC1-202ENST00000427943 ZSWIM4Q9H7M6 989 aa20.58■□□□□ 0.89
PSPC1-202ENST00000427943 TTC12Q9H892 705 aaPredicted RBP20.58■□□□□ 0.89
PSPC1-202ENST00000427943 AAASQ9NRG9 546 aa20.58■□□□□ 0.89
PSPC1-202ENST00000427943 PCDHA12Q9UN75 941 aa20.58■□□□□ 0.89
PSPC1-202ENST00000427943 PIN4Q9Y237 131 aaKnown RBP20.58■□□□□ 0.89
PSPC1-202ENST00000427943 PCDHB12Q9Y5F1 795 aa20.58■□□□□ 0.89
PSPC1-202ENST00000427943 COL4A3BPQ9Y5P4 624 aa20.58■□□□□ 0.89
PSPC1-202ENST00000427943 HOXA2O43364 376 aa20.57■□□□□ 0.88
PSPC1-202ENST00000427943 ATF7P17544 494 aaPredicted RBP20.57■□□□□ 0.88
PSPC1-202ENST00000427943 RFC5P40937 340 aa20.57■□□□□ 0.88
PSPC1-202ENST00000427943 TXKP42681 527 aa20.57■□□□□ 0.88
PSPC1-202ENST00000427943 CDC42EP1Q00587 391 aa20.57■□□□□ 0.88
PSPC1-202ENST00000427943 EMC2Q15006 297 aa20.57■□□□□ 0.88
PSPC1-202ENST00000427943 SAFBQ15424 915 aaKnown RBP eCLIP20.57■□□□□ 0.88
PSPC1-202ENST00000427943 XKR9Q5GH70 373 aa20.57■□□□□ 0.88
PSPC1-202ENST00000427943 CLLU1OSQ5K130 101 aa20.57■□□□□ 0.88
PSPC1-202ENST00000427943 THNSL1Q8IYQ7 743 aa20.57■□□□□ 0.88
PSPC1-202ENST00000427943 ABI1Q8IZP0 508 aa20.57■□□□□ 0.88
PSPC1-202ENST00000427943 CASD1Q96PB1 797 aa20.57■□□□□ 0.88
PSPC1-202ENST00000427943 LLPHQ9BRT6 129 aaKnown RBP20.57■□□□□ 0.88
PSPC1-202ENST00000427943 TMEM60Q9H2L4 133 aa20.57■□□□□ 0.88
PSPC1-202ENST00000427943 A0A0U1RQF3 1178 aa20.56■□□□□ 0.88
PSPC1-202ENST00000427943 POTEMA6NI47 508 aa20.56■□□□□ 0.88
PSPC1-202ENST00000427943 LINC01565O15544 149 aa20.56■□□□□ 0.88
PSPC1-202ENST00000427943 FGF18O76093 207 aa20.56■□□□□ 0.88
PSPC1-202ENST00000427943 LAG3P18627 525 aa20.56■□□□□ 0.88
PSPC1-202ENST00000427943 MCM7P33993 719 aa20.56■□□□□ 0.88
PSPC1-202ENST00000427943 PBX3P40426 434 aa20.56■□□□□ 0.88
PSPC1-202ENST00000427943 LRRC55Q6ZSA7 311 aa20.56■□□□□ 0.88
PSPC1-202ENST00000427943 OTUD6AQ7L8S5 288 aa20.56■□□□□ 0.88
PSPC1-202ENST00000427943 CATSPER4Q7RTX7 472 aa20.56■□□□□ 0.88
PSPC1-202ENST00000427943 LRRC43Q8N309 656 aa20.56■□□□□ 0.88
PSPC1-202ENST00000427943 HELQQ8TDG4 1101 aa20.56■□□□□ 0.88
PSPC1-202ENST00000427943 PSPC1Q8WXF1 523 aaKnown RBP20.56■□□□□ 0.88
PSPC1-202ENST00000427943 ZSCAN31Q96LW9 406 aaPredicted RBP20.56■□□□□ 0.88
PSPC1-202ENST00000427943 INO80BQ9C086 356 aaPredicted RBP20.56■□□□□ 0.88
PSPC1-202ENST00000427943 DACT1Q9NYF0 836 aa20.56■□□□□ 0.88
PSPC1-202ENST00000427943 PPME1Q9Y570 386 aa20.56■□□□□ 0.88
PSPC1-202ENST00000427943 TBX10O75333 385 aa20.55■□□□□ 0.88
PSPC1-202ENST00000427943 SLITRK3O94933 977 aa20.55■□□□□ 0.88
PSPC1-202ENST00000427943 LTBRP36941 435 aa20.55■□□□□ 0.88
PSPC1-202ENST00000427943 DLX2Q07687 328 aaPredicted RBP20.55■□□□□ 0.88
PSPC1-202ENST00000427943 CLUL1Q15846 466 aa20.55■□□□□ 0.88
PSPC1-202ENST00000427943 CTC1Q2NKJ3 1217 aa20.55■□□□□ 0.88
PSPC1-202ENST00000427943 LONRF3Q496Y0 759 aa20.55■□□□□ 0.88
PSPC1-202ENST00000427943 TWF2Q6IBS0 349 aaKnown RBP20.55■□□□□ 0.88
PSPC1-202ENST00000427943 ZNF598Q86UK7 904 aaKnown RBP20.55■□□□□ 0.88
PSPC1-202ENST00000427943 PRPF31Q8WWY3 499 aaKnown RBP20.55■□□□□ 0.88
PSPC1-202ENST00000427943 MTMR9Q96QG7 549 aa20.55■□□□□ 0.88
PSPC1-202ENST00000427943 IFT122Q9HBG6 1241 aa20.55■□□□□ 0.88
PSPC1-202ENST00000427943 SH2B1Q9NRF2 756 aaPredicted RBP20.55■□□□□ 0.88
PSPC1-202ENST00000427943 GRXCR2A6NFK2 248 aa20.54■□□□□ 0.88
PSPC1-202ENST00000427943 SRGAP2CP0DJJ0 459 aa20.54■□□□□ 0.88
PSPC1-202ENST00000427943 PHKA2P46019 1235 aa20.54■□□□□ 0.88
PSPC1-202ENST00000427943 LAMTOR4Q0VGL1 99 aa20.54■□□□□ 0.88
PSPC1-202ENST00000427943 RBM23Q86U06 439 aaKnown RBP20.54■□□□□ 0.88
PSPC1-202ENST00000427943 EXOC8Q8IYI6 725 aa20.54■□□□□ 0.88
PSPC1-202ENST00000427943 FAM184AQ8NB25 1140 aa20.54■□□□□ 0.88
PSPC1-202ENST00000427943 LPPQ93052 612 aa20.54■□□□□ 0.88
PSPC1-202ENST00000427943 PPP2R3CQ969Q6 453 aa20.54■□□□□ 0.88
PSPC1-202ENST00000427943 MTRQ99707 1265 aa20.54■□□□□ 0.88
PSPC1-202ENST00000427943 CD320Q9NPF0 282 aa20.54■□□□□ 0.88
PSPC1-202ENST00000427943 TLR9Q9NR96 1032 aa20.54■□□□□ 0.88
PSPC1-202ENST00000427943 CHST12Q9NRB3 414 aa20.54■□□□□ 0.88
PSPC1-202ENST00000427943 C5orf42Q9H799 3197 aa20.53■□□□□ 0.88
PSPC1-202ENST00000427943 NCK2O43639 380 aa20.53■□□□□ 0.88
PSPC1-202ENST00000427943 NRIP1P48552 1158 aa20.53■□□□□ 0.88
PSPC1-202ENST00000427943 RBM25P49756 843 aaKnown RBP20.53■□□□□ 0.88
PSPC1-202ENST00000427943 HMGN5P82970 282 aaKnown RBP20.53■□□□□ 0.88
PSPC1-202ENST00000427943 UBE3AQ05086 875 aa20.53■□□□□ 0.88
PSPC1-202ENST00000427943 MICAL1Q8TDZ2 1067 aa20.53■□□□□ 0.88
PSPC1-202ENST00000427943 TCP11Q8WWU5 503 aa20.53■□□□□ 0.88
PSPC1-202ENST00000427943 ZNF558Q96NG5 402 aa20.53■□□□□ 0.88
PSPC1-202ENST00000427943 HSD17B14Q9BPX1 270 aa20.53■□□□□ 0.88
PSPC1-202ENST00000427943 MINDY3Q9H8M7 445 aa20.53■□□□□ 0.88
PSPC1-202ENST00000427943 XPNPEP1Q9NQW7 623 aa20.53■□□□□ 0.88
PSPC1-202ENST00000427943 AGPAT5Q9NUQ2 364 aa20.53■□□□□ 0.88
PSPC1-202ENST00000427943 A0A087WWV3 80 aa20.52■□□□□ 0.88
PSPC1-202ENST00000427943 GAS2O43903 313 aaKnown RBP20.52■□□□□ 0.88
PSPC1-202ENST00000427943 LYPLA2O95372 231 aa20.52■□□□□ 0.88
PSPC1-202ENST00000427943 EOMESO95936 686 aa20.52■□□□□ 0.88
PSPC1-202ENST00000427943 NDUFV1P49821 464 aa20.52■□□□□ 0.88
PSPC1-202ENST00000427943 ERVFC1P60507 584 aa20.52■□□□□ 0.88
PSPC1-202ENST00000427943 GNL2Q13823 731 aaKnown RBP20.52■□□□□ 0.88
PSPC1-202ENST00000427943 CSPP1Q1MSJ5 1256 aa20.52■□□□□ 0.88
PSPC1-202ENST00000427943 KCNT2Q6UVM3 1135 aa20.52■□□□□ 0.88
PSPC1-202ENST00000427943 FERMT3Q86UX7 667 aa20.52■□□□□ 0.88
PSPC1-202ENST00000427943 FAM178BQ8IXR5 827 aa20.52■□□□□ 0.88
PSPC1-202ENST00000427943 RNF149Q8NC42 400 aa20.52■□□□□ 0.88
PSPC1-202ENST00000427943 KHSRPQ92945 711 aaKnown RBP eCLIP20.52■□□□□ 0.88
PSPC1-202ENST00000427943 CCDC43Q96MW1 224 aaKnown RBP20.52■□□□□ 0.88
PSPC1-202ENST00000427943 FAM105AQ9NUU6 356 aa20.52■□□□□ 0.88
PSPC1-202ENST00000427943 TDRD15B5MCY1 1934 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms