RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 LYPLA2O95372 231 aa16.94■□□□□ 0.3
PHF1-204ENST00000427826 ITGB1P05556 798 aa16.94■□□□□ 0.3
PHF1-204ENST00000427826 FGFR1P11362 822 aa16.94■□□□□ 0.3
PHF1-204ENST00000427826 TXKP42681 527 aa16.94■□□□□ 0.3
PHF1-204ENST00000427826 GUCY1B3Q02153 619 aa16.94■□□□□ 0.3
PHF1-204ENST00000427826 CYP4A11Q02928 519 aa16.94■□□□□ 0.3
PHF1-204ENST00000427826 UBE3AQ05086 875 aa16.94■□□□□ 0.3
PHF1-204ENST00000427826 GNL2Q13823 731 aaKnown RBP16.94■□□□□ 0.3
PHF1-204ENST00000427826 CTTNQ14247 550 aaKnown RBP16.94■□□□□ 0.3
PHF1-204ENST00000427826 COL19A1Q14993 1142 aa16.94■□□□□ 0.3
PHF1-204ENST00000427826 RABEP1Q15276 862 aa16.94■□□□□ 0.3
PHF1-204ENST00000427826 XKR9Q5GH70 373 aa16.94■□□□□ 0.3
PHF1-204ENST00000427826 FBXO18Q8NFZ0 1043 aa16.94■□□□□ 0.3
PHF1-204ENST00000427826 NLRP4Q96MN2 994 aa16.94■□□□□ 0.3
PHF1-204ENST00000427826 MTMR9Q96QG7 549 aa16.94■□□□□ 0.3
PHF1-204ENST00000427826 HSD17B14Q9BPX1 270 aa16.94■□□□□ 0.3
PHF1-204ENST00000427826 TRAIPQ9BWF2 469 aa16.94■□□□□ 0.3
PHF1-204ENST00000427826 TYW1Q9NV66 732 aaKnown RBP16.94■□□□□ 0.3
PHF1-204ENST00000427826 COL4A3BPQ9Y5P4 624 aa16.94■□□□□ 0.3
PHF1-204ENST00000427826 ST18O60284 1047 aa16.93■□□□□ 0.3
PHF1-204ENST00000427826 CSDE1O75534 798 aaKnown RBP16.93■□□□□ 0.3
PHF1-204ENST00000427826 LAG3P18627 525 aa16.93■□□□□ 0.3
PHF1-204ENST00000427826 FGFR4P22455 802 aa16.93■□□□□ 0.3
PHF1-204ENST00000427826 CATSPER4Q7RTX7 472 aa16.93■□□□□ 0.3
PHF1-204ENST00000427826 ZNF579Q8NAF0 562 aaKnown RBP16.93■□□□□ 0.3
PHF1-204ENST00000427826 RNF169Q8NCN4 708 aa16.93■□□□□ 0.3
PHF1-204ENST00000427826 POF1BQ8WVV4 589 aa16.93■□□□□ 0.3
PHF1-204ENST00000427826 PRPF31Q8WWY3 499 aaKnown RBP16.93■□□□□ 0.3
PHF1-204ENST00000427826 CCDC43Q96MW1 224 aaKnown RBP16.93■□□□□ 0.3
PHF1-204ENST00000427826 ANKEF1Q9NU02 776 aa16.93■□□□□ 0.3
PHF1-204ENST00000427826 FAM50BQ9Y247 325 aa16.93■□□□□ 0.3
PHF1-204ENST00000427826 NLRC5Q86WI3 1866 aa16.93■□□□□ 0.3
PHF1-204ENST00000427826 MUC3AQ02505 3323 aa16.92■□□□□ 0.3
PHF1-204ENST00000427826 XRCC6P12956 609 aaKnown RBP eCLIP16.92■□□□□ 0.3
PHF1-204ENST00000427826 ATP2B1P20020 1258 aa16.92■□□□□ 0.3
PHF1-204ENST00000427826 MCM7P33993 719 aa16.92■□□□□ 0.3
PHF1-204ENST00000427826 LAMTOR4Q0VGL1 99 aa16.92■□□□□ 0.3
PHF1-204ENST00000427826 CAMK1Q14012 370 aa16.92■□□□□ 0.3
PHF1-204ENST00000427826 MXD4Q14582 209 aaPredicted RBP16.92■□□□□ 0.3
PHF1-204ENST00000427826 EMC2Q15006 297 aa16.92■□□□□ 0.3
PHF1-204ENST00000427826 TWF2Q6IBS0 349 aaKnown RBP16.92■□□□□ 0.3
PHF1-204ENST00000427826 EP400NLQ6ZTU2 488 aa16.92■□□□□ 0.3
PHF1-204ENST00000427826 SRGAP1Q7Z6B7 1085 aa16.92■□□□□ 0.3
PHF1-204ENST00000427826 KSR1Q8IVT5 923 aa16.92■□□□□ 0.3
PHF1-204ENST00000427826 THNSL1Q8IYQ7 743 aa16.92■□□□□ 0.3
PHF1-204ENST00000427826 LRRC43Q8N309 656 aa16.92■□□□□ 0.3
PHF1-204ENST00000427826 COLGALT1Q8NBJ5 622 aa16.92■□□□□ 0.3
PHF1-204ENST00000427826 TMEM143Q96AN5 459 aa16.92■□□□□ 0.3
PHF1-204ENST00000427826 CASD1Q96PB1 797 aa16.92■□□□□ 0.3
PHF1-204ENST00000427826 MTRQ99707 1265 aa16.92■□□□□ 0.3
PHF1-204ENST00000427826 IFT122Q9HBG6 1241 aa16.92■□□□□ 0.3
PHF1-204ENST00000427826 CLDND1Q9NY35 253 aa16.92■□□□□ 0.3
PHF1-204ENST00000427826 PIN4Q9Y237 131 aaKnown RBP16.92■□□□□ 0.3
PHF1-204ENST00000427826 KIF3AQ9Y496 699 aa16.92■□□□□ 0.3
PHF1-204ENST00000427826 DGAT1O75907 488 aa16.91■□□□□ 0.3
PHF1-204ENST00000427826 SRGAP2CP0DJJ0 459 aa16.91■□□□□ 0.3
PHF1-204ENST00000427826 DNAJB1P25685 340 aa16.91■□□□□ 0.3
PHF1-204ENST00000427826 PHKA2P46019 1235 aa16.91■□□□□ 0.3
PHF1-204ENST00000427826 TRAPPC10P48553 1259 aa16.91■□□□□ 0.3
PHF1-204ENST00000427826 RAB27AP51159 221 aa16.91■□□□□ 0.3
PHF1-204ENST00000427826 HYAL1Q12794 435 aa16.91■□□□□ 0.3
PHF1-204ENST00000427826 PCBP1Q15365 356 aaKnown RBP eCLIP16.91■□□□□ 0.32e-8■■■■■ 42.8
PHF1-204ENST00000427826 CTC1Q2NKJ3 1217 aa16.91■□□□□ 0.3
PHF1-204ENST00000427826 PTCRAQ6ISU1 281 aaPredicted RBP16.91■□□□□ 0.3
PHF1-204ENST00000427826 PDE12Q6L8Q7 609 aaKnown RBP16.91■□□□□ 0.3
PHF1-204ENST00000427826 ZNF598Q86UK7 904 aaKnown RBP16.91■□□□□ 0.3
PHF1-204ENST00000427826 NOSTRINQ8IVI9 506 aa16.91■□□□□ 0.3
PHF1-204ENST00000427826 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.91■□□□□ 0.3
PHF1-204ENST00000427826 MRPL9Q9BYD2 267 aaKnown RBP16.91■□□□□ 0.3
PHF1-204ENST00000427826 CWH43Q9H720 699 aa16.91■□□□□ 0.3
PHF1-204ENST00000427826 PUF60Q9UHX1 559 aaKnown RBP16.91■□□□□ 0.3
PHF1-204ENST00000427826 NOL7Q9UMY1 257 aaKnown RBP16.91■□□□□ 0.3
PHF1-204ENST00000427826 LZTS1Q9Y250 596 aa16.91■□□□□ 0.3
PHF1-204ENST00000427826 FSD2A1L4K1 749 aa16.9■□□□□ 0.3
PHF1-204ENST00000427826 CARNS1A5YM72 827 aa16.9■□□□□ 0.3
PHF1-204ENST00000427826 WNT7AO00755 349 aa16.9■□□□□ 0.3
PHF1-204ENST00000427826 ZBTB39O15060 712 aa16.9■□□□□ 0.3
PHF1-204ENST00000427826 FGF18O76093 207 aa16.9■□□□□ 0.3
PHF1-204ENST00000427826 PPM1AP35813 382 aa16.9■□□□□ 0.3
PHF1-204ENST00000427826 TFDP1Q14186 410 aa16.9■□□□□ 0.3
PHF1-204ENST00000427826 FERMT3Q86UX7 667 aa16.9■□□□□ 0.3
PHF1-204ENST00000427826 ERMNQ8TAM6 284 aa16.9■□□□□ 0.3
PHF1-204ENST00000427826 MICAL1Q8TDZ2 1067 aa16.9■□□□□ 0.3
PHF1-204ENST00000427826 ZNF558Q96NG5 402 aa16.9■□□□□ 0.3
PHF1-204ENST00000427826 NECAB3Q96P71 396 aaPredicted RBP16.9■□□□□ 0.3
PHF1-204ENST00000427826 TMEM60Q9H2L4 133 aa16.9■□□□□ 0.3
PHF1-204ENST00000427826 RNF19AQ9NV58 838 aa16.9■□□□□ 0.3
PHF1-204ENST00000427826 NCOR1O75376 2440 aa16.89■□□□□ 0.29
PHF1-204ENST00000427826 GRXCR2A6NFK2 248 aa16.89■□□□□ 0.29
PHF1-204ENST00000427826 H3BQ06 376 aaPredicted RBP16.89■□□□□ 0.29
PHF1-204ENST00000427826 ZNF623O75123 536 aa16.89■□□□□ 0.29
PHF1-204ENST00000427826 PLCB3Q01970 1234 aa16.89■□□□□ 0.29
PHF1-204ENST00000427826 KRT17Q04695 432 aa16.89■□□□□ 0.29
PHF1-204ENST00000427826 POU5F1BQ06416 359 aa16.89■□□□□ 0.29
PHF1-204ENST00000427826 NCBP1Q09161 790 aaKnown RBP16.89■□□□□ 0.29
PHF1-204ENST00000427826 ZNF174Q15697 407 aa16.89■□□□□ 0.29
PHF1-204ENST00000427826 CLLU1OSQ5K130 101 aa16.89■□□□□ 0.29
PHF1-204ENST00000427826 TTC38Q5R3I4 469 aa16.89■□□□□ 0.29
PHF1-204ENST00000427826 KCNT2Q6UVM3 1135 aa16.89■□□□□ 0.29
PHF1-204ENST00000427826 LRRC55Q6ZSA7 311 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms