RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 RFX8Q6ZV50 586 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 IL31Q6EBC2 164 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.09□□□□□ -0.15
SPG11-202ENST00000427534 TTC17Q96AE7 1141 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 EGFL8Q99944 293 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 DNAJC12Q9UKB3 198 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 ZBTB5O15062 677 aa14.08□□□□□ -0.15
SPG11-202ENST00000427534 ANP32DO95626 131 aa14.08□□□□□ -0.15
SPG11-202ENST00000427534 MAN2A1Q16706 1144 aa14.08□□□□□ -0.15
SPG11-202ENST00000427534 TCP11Q8WWU5 503 aa14.08□□□□□ -0.15
SPG11-202ENST00000427534 DPF3Q92784 378 aa14.08□□□□□ -0.15
SPG11-202ENST00000427534 UBE4BO95155 1302 aa14.08□□□□□ -0.15
SPG11-202ENST00000427534 EIF4E1BA6NMX2 242 aaKnown RBP14.08□□□□□ -0.15
SPG11-202ENST00000427534 LIFRP42702 1097 aa14.08□□□□□ -0.15
SPG11-202ENST00000427534 AMHR2Q16671 573 aa14.08□□□□□ -0.15
SPG11-202ENST00000427534 ELMSAN1Q6PJG2 1045 aa14.08□□□□□ -0.15
SPG11-202ENST00000427534 C11orf96Q7Z7L8 435 aa14.08□□□□□ -0.15
SPG11-202ENST00000427534 SMAD5Q99717 465 aaKnown RBP14.08□□□□□ -0.15
SPG11-202ENST00000427534 GGA3Q9NZ52 723 aa14.08□□□□□ -0.15
SPG11-202ENST00000427534 TADA2AO75478 443 aa14.08□□□□□ -0.16
SPG11-202ENST00000427534 IMPG1Q17R60 797 aa14.08□□□□□ -0.16
SPG11-202ENST00000427534 CCDC38Q502W7 563 aa14.08□□□□□ -0.16
SPG11-202ENST00000427534 EFCAB13Q8IY85 973 aa14.08□□□□□ -0.16
SPG11-202ENST00000427534 BEST2Q8NFU1 509 aa14.08□□□□□ -0.16
SPG11-202ENST00000427534 INTS9Q9NV88 658 aaKnown RBP14.08□□□□□ -0.16
SPG11-202ENST00000427534 ADAMTS1Q9UHI8 967 aa14.08□□□□□ -0.16
SPG11-202ENST00000427534 TDP2O95551 362 aa14.08□□□□□ -0.16
SPG11-202ENST00000427534 RSBN1LQ6PCB5 846 aaPredicted RBP14.08□□□□□ -0.16
SPG11-202ENST00000427534 APOBEC3FQ8IUX4 373 aaKnown RBP14.08□□□□□ -0.16
SPG11-202ENST00000427534 FBXL13Q8NEE6 735 aa14.08□□□□□ -0.16
SPG11-202ENST00000427534 MORC4Q8TE76 937 aa14.08□□□□□ -0.16
SPG11-202ENST00000427534 RMDN1Q96DB5 314 aa14.08□□□□□ -0.16
SPG11-202ENST00000427534 MAP10Q9P2G4 905 aa14.08□□□□□ -0.16
SPG11-202ENST00000427534 IGKV5-2P06315 115 aa14.08□□□□□ -0.16
SPG11-202ENST00000427534 AKR1B1P15121 316 aa14.08□□□□□ -0.16
SPG11-202ENST00000427534 MTM1Q13496 603 aa14.08□□□□□ -0.16
SPG11-202ENST00000427534 TMTC3Q6ZXV5 915 aa14.08□□□□□ -0.16
SPG11-202ENST00000427534 ADCK2Q7Z695 626 aa14.08□□□□□ -0.16
SPG11-202ENST00000427534 FOXP4Q8IVH2 680 aaPredicted RBP14.08□□□□□ -0.16
SPG11-202ENST00000427534 RNF149Q8NC42 400 aa14.08□□□□□ -0.16
SPG11-202ENST00000427534 VPS11Q9H270 941 aa14.08□□□□□ -0.16
SPG11-202ENST00000427534 DOLKQ9UPQ8 538 aa14.08□□□□□ -0.16
SPG11-202ENST00000427534 CSE1LP55060 971 aaKnown RBP14.08□□□□□ -0.16
SPG11-202ENST00000427534 ART3Q13508 389 aa14.08□□□□□ -0.16
SPG11-202ENST00000427534 RASSF3Q86WH2 238 aa14.08□□□□□ -0.16
SPG11-202ENST00000427534 ZCCHC11Q5TAX3 1644 aaKnown RBP14.07□□□□□ -0.16
SPG11-202ENST00000427534 VGLL3A8MV65 326 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 CHGBP05060 677 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 GCFC2P16383 781 aaKnown RBP14.07□□□□□ -0.16
SPG11-202ENST00000427534 NNMTP40261 264 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 IFNLR1Q8IU57 520 aaPredicted RBP14.07□□□□□ -0.16
SPG11-202ENST00000427534 SAYSD1Q9NPB0 183 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 DYRK4Q9NR20 520 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 HOMER3Q9NSC5 361 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 EXOC1LA0A1B0GW35 172 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 ATP9BO43861 1147 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 APOEP02649 317 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 CCT5P48643 541 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 DHX9Q08211 1270 aaKnown RBP14.07□□□□□ -0.16
SPG11-202ENST00000427534 DEFB132Q7Z7B7 95 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 CDR2LQ86X02 465 aaPredicted RBP14.07□□□□□ -0.16
SPG11-202ENST00000427534 L3MBTL3Q96JM7 780 aaPredicted RBP14.07□□□□□ -0.16
SPG11-202ENST00000427534 ZC3H4Q9UPT8 1303 aaKnown RBP14.07□□□□□ -0.16
SPG11-202ENST00000427534 F5H6K3 240 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 GRAP2O75791 330 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 KLRC3Q07444 240 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 PYROXD1Q8WU10 500 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 AGAP3Q96P47 875 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 LXNQ9BS40 222 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 NCK2O43639 380 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 IFT88Q13099 833 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 COBLL1Q53SF7 1204 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 GBP5Q96PP8 586 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 SMYD3Q9H7B4 428 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 FAM47DPA6NHR8 397 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 NSUN6Q8TEA1 469 aaKnown RBP14.07□□□□□ -0.16
SPG11-202ENST00000427534 MRPL47Q9HD33 250 aaKnown RBP14.07□□□□□ -0.16
SPG11-202ENST00000427534 RGL1Q9NZL6 768 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 NARFQ9UHQ1 456 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 NCAPD2Q15021 1401 aa14.07□□□□□ -0.16
SPG11-202ENST00000427534 RSPH10B2B2RC85 870 aa14.06□□□□□ -0.16
SPG11-202ENST00000427534 RSPH10BP0C881 870 aa14.06□□□□□ -0.16
SPG11-202ENST00000427534 TRIM49P0CI25 452 aa14.06□□□□□ -0.16
SPG11-202ENST00000427534 TRIM49CP0CI26 452 aa14.06□□□□□ -0.16
SPG11-202ENST00000427534 ATP1A3P13637 1013 aa14.06□□□□□ -0.16
SPG11-202ENST00000427534 HUNKP57058 714 aa14.06□□□□□ -0.16
SPG11-202ENST00000427534 ARID5BQ14865 1188 aa14.06□□□□□ -0.16
SPG11-202ENST00000427534 BCAS4Q8TDM0 211 aa14.06□□□□□ -0.16
SPG11-202ENST00000427534 UBE2Q2Q8WVN8 375 aa14.06□□□□□ -0.16
SPG11-202ENST00000427534 CASS4Q9NQ75 786 aa14.06□□□□□ -0.16
SPG11-202ENST00000427534 ADAM22Q9P0K1 906 aa14.06□□□□□ -0.16
SPG11-202ENST00000427534 DCAF4Q8WV16 495 aa14.06□□□□□ -0.16
SPG11-202ENST00000427534 DHX35Q9H5Z1 703 aaKnown RBP14.06□□□□□ -0.16
SPG11-202ENST00000427534 MAP3K4Q9Y6R4 1608 aa14.06□□□□□ -0.16
SPG11-202ENST00000427534 PSMD14O00487 310 aa14.06□□□□□ -0.16
SPG11-202ENST00000427534 PRRG1O14668 218 aa14.06□□□□□ -0.16
SPG11-202ENST00000427534 MGEA5O60502 916 aa14.06□□□□□ -0.16
SPG11-202ENST00000427534 SPAG7O75391 227 aa14.06□□□□□ -0.16
SPG11-202ENST00000427534 ZC3H18Q86VM9 953 aaKnown RBP14.06□□□□□ -0.16
SPG11-202ENST00000427534 KIF1BO60333 1816 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms