RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 SRPK3Q9UPE1 567 aa3.69□□□□□ -1.82
R3HDM1-205ENST00000425804 RBM8AQ9Y5S9 174 aaKnown RBP3.69□□□□□ -1.82
R3HDM1-205ENST00000425804 WDR91A4D1P6 747 aa3.68□□□□□ -1.82
R3HDM1-205ENST00000425804 C2orf78A6NCI8 922 aa3.68□□□□□ -1.82
R3HDM1-205ENST00000425804 PRAMEF25A6NGN4 478 aa3.68□□□□□ -1.82
R3HDM1-205ENST00000425804 SUSD5O60279 629 aa3.68□□□□□ -1.82
R3HDM1-205ENST00000425804 SOD2P04179 222 aa3.68□□□□□ -1.82
R3HDM1-205ENST00000425804 CAPNS1P04632 268 aa3.68□□□□□ -1.82
R3HDM1-205ENST00000425804 SSBP05455 408 aaKnown RBP eCLIP3.68□□□□□ -1.82
R3HDM1-205ENST00000425804 HK1P19367 917 aa3.68□□□□□ -1.82
R3HDM1-205ENST00000425804 DCAF17Q5H9S7 520 aaPredicted RBP3.68□□□□□ -1.82
R3HDM1-205ENST00000425804 SH2D3CQ8N5H7 860 aa3.68□□□□□ -1.82
R3HDM1-205ENST00000425804 CAGE1Q8TC20 777 aa3.68□□□□□ -1.82
R3HDM1-205ENST00000425804 ST8SIA2Q92186 375 aa3.68□□□□□ -1.82
R3HDM1-205ENST00000425804 GCDHQ92947 438 aaPredicted RBP3.68□□□□□ -1.82
R3HDM1-205ENST00000425804 KCNH6Q9H252 994 aa3.68□□□□□ -1.82
R3HDM1-205ENST00000425804 ZNF408Q9H9D4 720 aa3.68□□□□□ -1.82
R3HDM1-205ENST00000425804 USP35Q9P2H5 1018 aa3.68□□□□□ -1.82
R3HDM1-205ENST00000425804 FAM47E-STBD1D6RA91 191 aa3.67□□□□□ -1.82
R3HDM1-205ENST00000425804 H2AFYO75367 372 aaKnown RBP3.67□□□□□ -1.82
R3HDM1-205ENST00000425804 GJB6O95452 261 aa3.67□□□□□ -1.82
R3HDM1-205ENST00000425804 C4BPAP04003 597 aaKnown RBP3.67□□□□□ -1.82
R3HDM1-205ENST00000425804 FGRP09769 529 aa3.67□□□□□ -1.82
R3HDM1-205ENST00000425804 CCKBRP32239 447 aa3.67□□□□□ -1.82
R3HDM1-205ENST00000425804 TCIRG1Q13488 830 aa3.67□□□□□ -1.82
R3HDM1-205ENST00000425804 KCNT2Q6UVM3 1135 aa3.67□□□□□ -1.82
R3HDM1-205ENST00000425804 CELF2-AS1Q8N7Q2 184 aa3.67□□□□□ -1.82
R3HDM1-205ENST00000425804 HNRNPLLQ8WVV9 542 aaKnown RBP3.67□□□□□ -1.82
R3HDM1-205ENST00000425804 TINF2Q9BSI4 451 aa3.67□□□□□ -1.82
R3HDM1-205ENST00000425804 IPPKQ9H8X2 491 aa3.67□□□□□ -1.82
R3HDM1-205ENST00000425804 ST7Q9NRC1 585 aa3.67□□□□□ -1.82
R3HDM1-205ENST00000425804 PRKAG3Q9UGI9 489 aa3.67□□□□□ -1.82
R3HDM1-205ENST00000425804 EIF2B4Q9UI10 523 aaKnown RBP3.67□□□□□ -1.82
R3HDM1-205ENST00000425804 RCAN3Q9UKA8 241 aa3.67□□□□□ -1.82
R3HDM1-205ENST00000425804 ATP23Q9Y6H3 246 aa3.67□□□□□ -1.82
R3HDM1-205ENST00000425804 C1QL1O75973 258 aa3.66□□□□□ -1.82
R3HDM1-205ENST00000425804 TCF3P15923 654 aa3.66□□□□□ -1.82
R3HDM1-205ENST00000425804 SESN2P58004 480 aaPredicted RBP3.66□□□□□ -1.82
R3HDM1-205ENST00000425804 HERVK_113P62684 666 aa3.66□□□□□ -1.82
R3HDM1-205ENST00000425804 MCF2L2Q86YR7 1114 aa3.66□□□□□ -1.82
R3HDM1-205ENST00000425804 ARL8AQ96BM9 186 aa3.66□□□□□ -1.82
R3HDM1-205ENST00000425804 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.66□□□□□ -1.82
R3HDM1-205ENST00000425804 DUSP26Q9BV47 211 aa3.66□□□□□ -1.82
R3HDM1-205ENST00000425804 KMT5AQ9NQR1 393 aa3.66□□□□□ -1.82
R3HDM1-205ENST00000425804 LRRC3CA6NJW4 275 aa3.65□□□□□ -1.83
R3HDM1-205ENST00000425804 GNAT2P19087 354 aa3.65□□□□□ -1.83
R3HDM1-205ENST00000425804 SLC10A6Q3KNW5 377 aa3.65□□□□□ -1.83
R3HDM1-205ENST00000425804 GAGE13Q4V321 117 aa3.65□□□□□ -1.83
R3HDM1-205ENST00000425804 TNNI3KQ59H18 835 aa3.65□□□□□ -1.83
R3HDM1-205ENST00000425804 RUSC1-AS1Q66K80 236 aa3.65□□□□□ -1.83
R3HDM1-205ENST00000425804 ARHGAP36Q6ZRI8 547 aa3.65□□□□□ -1.83
R3HDM1-205ENST00000425804 ARHGEF25Q86VW2 580 aa3.65□□□□□ -1.83
R3HDM1-205ENST00000425804 VPS37DQ86XT2 251 aa3.65□□□□□ -1.83
R3HDM1-205ENST00000425804 GFM2Q969S9 779 aaKnown RBP3.65□□□□□ -1.83
R3HDM1-205ENST00000425804 IER2Q9BTL4 223 aa3.65□□□□□ -1.83
R3HDM1-205ENST00000425804 CHMP4AQ9BY43 222 aa3.65□□□□□ -1.83
R3HDM1-205ENST00000425804 KIAA1586Q9HCI6 787 aa3.65□□□□□ -1.83
R3HDM1-205ENST00000425804 SEMA4GQ9NTN9 838 aa3.65□□□□□ -1.83
R3HDM1-205ENST00000425804 A0A1W2PQU0 124 aa3.64□□□□□ -1.83
R3HDM1-205ENST00000425804 PIPSLA2A3N6 862 aa3.64□□□□□ -1.83
R3HDM1-205ENST00000425804 DLX3O60479 287 aa3.64□□□□□ -1.83
R3HDM1-205ENST00000425804 NCR1O76036 304 aa3.64□□□□□ -1.83
R3HDM1-205ENST00000425804 ESRRBO95718 433 aa3.64□□□□□ -1.83
R3HDM1-205ENST00000425804 GPR85P60893 370 aa3.64□□□□□ -1.83
R3HDM1-205ENST00000425804 PPP2R2AP63151 447 aa3.64□□□□□ -1.83
R3HDM1-205ENST00000425804 MAP3K12Q12852 859 aa3.64□□□□□ -1.83
R3HDM1-205ENST00000425804 FXNQ16595 210 aa3.64□□□□□ -1.83
R3HDM1-205ENST00000425804 FIGNQ5HY92 759 aa3.64□□□□□ -1.83
R3HDM1-205ENST00000425804 LILRA3Q8N6C8 439 aaPredicted RBP3.64□□□□□ -1.83
R3HDM1-205ENST00000425804 DCAF4Q8WV16 495 aa3.64□□□□□ -1.83
R3HDM1-205ENST00000425804 AKIP1Q9NQ31 210 aa3.64□□□□□ -1.83
R3HDM1-205ENST00000425804 DKK2Q9UBU2 259 aa3.64□□□□□ -1.83
R3HDM1-205ENST00000425804 SALL3Q9BXA9 1300 aa3.64□□□□□ -1.83
R3HDM1-205ENST00000425804 MAFO75444 373 aaPredicted RBP3.63□□□□□ -1.83
R3HDM1-205ENST00000425804 NDUFA10O95299 355 aa3.63□□□□□ -1.83
R3HDM1-205ENST00000425804 MMEP08473 750 aa3.63□□□□□ -1.83
R3HDM1-205ENST00000425804 ARID5AQ03989 594 aa3.63□□□□□ -1.83
R3HDM1-205ENST00000425804 GPR19Q15760 415 aa3.63□□□□□ -1.83
R3HDM1-205ENST00000425804 ANKS3Q6ZW76 656 aa3.63□□□□□ -1.83
R3HDM1-205ENST00000425804 APBB1IPQ7Z5R6 666 aaPredicted RBP3.63□□□□□ -1.83
R3HDM1-205ENST00000425804 PTRH1Q86Y79 214 aaKnown RBP3.63□□□□□ -1.83
R3HDM1-205ENST00000425804 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.63□□□□□ -1.83
R3HDM1-205ENST00000425804 SLC9A6Q92581 669 aa3.63□□□□□ -1.83
R3HDM1-205ENST00000425804 ZFYVE21Q9BQ24 234 aa3.63□□□□□ -1.83
R3HDM1-205ENST00000425804 TRPM5Q9NZQ8 1165 aa3.63□□□□□ -1.83
R3HDM1-205ENST00000425804 MAGEL2Q9UJ55 1249 aa3.63□□□□□ -1.83
R3HDM1-205ENST00000425804 ZNF580Q9UK33 172 aa3.63□□□□□ -1.83
R3HDM1-205ENST00000425804 DENND2AQ9ULE3 1009 aa3.63□□□□□ -1.83
R3HDM1-205ENST00000425804 BLACEA4D250 179 aa3.62□□□□□ -1.83
R3HDM1-205ENST00000425804 RNASET2O00584 256 aaKnown RBP3.62□□□□□ -1.83
R3HDM1-205ENST00000425804 STC2O76061 302 aa3.62□□□□□ -1.83
R3HDM1-205ENST00000425804 TOX4O94842 621 aa3.62□□□□□ -1.83
R3HDM1-205ENST00000425804 AMY2AP04746 511 aa3.62□□□□□ -1.83
R3HDM1-205ENST00000425804 VSIG10L2P0DP72 767 aa3.62□□□□□ -1.83
R3HDM1-205ENST00000425804 KRT10P13645 584 aa3.62□□□□□ -1.83
R3HDM1-205ENST00000425804 AMY2BP19961 511 aa3.62□□□□□ -1.83
R3HDM1-205ENST00000425804 MPLP40238 635 aa3.62□□□□□ -1.83
R3HDM1-205ENST00000425804 MPP3Q13368 585 aa3.62□□□□□ -1.83
R3HDM1-205ENST00000425804 KRT40Q6A162 431 aa3.62□□□□□ -1.83
R3HDM1-205ENST00000425804 EEPD1Q7L9B9 569 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms