RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 SOX10P56693 466 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 ARHGAP1Q07960 439 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 KCNH2Q12809 1159 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 IRF5Q13568 498 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 LAMC2Q13753 1193 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 MEA1Q16626 185 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 MORN1Q5T089 497 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 TMEM63BQ5T3F8 832 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 C17orf99Q6UX52 265 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 NYAP1Q6ZVC0 841 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 TMTC1Q8IUR5 882 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 COPS5Q92905 334 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 CCDC102AQ96A19 550 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 SLC35C1Q96A29 364 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 EDEM3Q9BZQ6 932 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 AGPAT5Q9NUQ2 364 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 CCDC169A6NNP5 214 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 H0YCG3 227 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 CCP110O43303 1012 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 ARL2P36404 184 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 MCCD1P59942 119 aaPredicted RBP16.66■□□□□ 0.26
ACTB-204ENST00000425660 FAM186BQ8IYM0 893 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 CCDC155Q8N6L0 562 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 ATP8B4Q8TF62 1192 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 IFT74Q96LB3 600 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 TINF2Q9BSI4 451 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 POLR3FQ9H1D9 316 aaPredicted RBP16.66■□□□□ 0.26
ACTB-204ENST00000425660 SLC5A4Q9NY91 659 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 EXOC7Q9UPT5 735 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 FRMD4BQ9Y2L6 1034 aa16.66■□□□□ 0.26
ACTB-204ENST00000425660 ADGRA3Q8IWK6 1321 aa16.65■□□□□ 0.26
ACTB-204ENST00000425660 DENND3A2RUS2 1198 aa16.65■□□□□ 0.26
ACTB-204ENST00000425660 MAFO75444 373 aaPredicted RBP16.65■□□□□ 0.26
ACTB-204ENST00000425660 AFPP02771 609 aaKnown RBP16.65■□□□□ 0.26
ACTB-204ENST00000425660 HOXC6P09630 235 aa16.65■□□□□ 0.26
ACTB-204ENST00000425660 HNRNPH3P31942 346 aaKnown RBP16.65■□□□□ 0.26
ACTB-204ENST00000425660 PPP2R5AQ15172 486 aa16.65■□□□□ 0.26
ACTB-204ENST00000425660 GLG1Q92896 1179 aa16.65■□□□□ 0.26
ACTB-204ENST00000425660 PPP1R13BQ96KQ4 1090 aa16.65■□□□□ 0.26
ACTB-204ENST00000425660 ABHD16BQ9H3Z7 469 aa16.65■□□□□ 0.26
ACTB-204ENST00000425660 SMARCAD1Q9H4L7 1026 aa16.65■□□□□ 0.26
ACTB-204ENST00000425660 GTPBP10A4D1E9 387 aaKnown RBP16.64■□□□□ 0.25
ACTB-204ENST00000425660 SOWAHDA6NJG2 315 aa16.64■□□□□ 0.25
ACTB-204ENST00000425660 ZBTB42B2RXF5 422 aa16.64■□□□□ 0.25
ACTB-204ENST00000425660 EPHB6O15197 1021 aa16.64■□□□□ 0.25
ACTB-204ENST00000425660 MAPK13O15264 365 aa16.64■□□□□ 0.25
ACTB-204ENST00000425660 GH1P01241 217 aa16.64■□□□□ 0.25
ACTB-204ENST00000425660 SREBF2Q12772 1141 aa16.64■□□□□ 0.25
ACTB-204ENST00000425660 CYP26C1Q6V0L0 522 aa16.64■□□□□ 0.25
ACTB-204ENST00000425660 TRIM50Q86XT4 487 aa16.64■□□□□ 0.25
ACTB-204ENST00000425660 EXOC8Q8IYI6 725 aa16.64■□□□□ 0.25
ACTB-204ENST00000425660 ZNF397Q8NF99 534 aaPredicted RBP16.64■□□□□ 0.25
ACTB-204ENST00000425660 PPTC7Q8NI37 304 aa16.64■□□□□ 0.25
ACTB-204ENST00000425660 NPLOC4Q8TAT6 608 aa16.64■□□□□ 0.25
ACTB-204ENST00000425660 PCMTD1Q96MG8 357 aaPredicted RBP16.64■□□□□ 0.25
ACTB-204ENST00000425660 KIFC3Q9BVG8 833 aa16.64■□□□□ 0.25
ACTB-204ENST00000425660 MMRN2Q9H8L6 949 aa16.64■□□□□ 0.25
ACTB-204ENST00000425660 FAM207AQ9NSI2 230 aaPredicted RBP16.64■□□□□ 0.25
ACTB-204ENST00000425660 GAS2O43903 313 aaKnown RBP16.63■□□□□ 0.25
ACTB-204ENST00000425660 NAMPTP43490 491 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 CDK17Q00537 523 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 BRDTQ58F21 947 aaPredicted RBP16.63■□□□□ 0.25
ACTB-204ENST00000425660 WDR59Q6PJI9 974 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 RAD9BQ6WBX8 426 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 TRMT1Q9NXH9 659 aaKnown RBP16.63■□□□□ 0.25
ACTB-204ENST00000425660 PLAGL2Q9UPG8 496 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 IGKV6-21A0A0C4DH24 114 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 TISP43B9A030 160 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 ZSCAN12O43309 604 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 EXOC3O60645 756 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 NOL4O94818 638 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 GLRA2P23416 452 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 CNGA1P29973 690 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 ADSSP30520 456 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 ADCYAP1R1P41586 468 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 TM4SF4P48230 202 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 CYP2J2P51589 502 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 MAP2K5Q13163 448 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 PLCB4Q15147 1175 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 DUSP28Q4G0W2 176 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 TOGARAM2Q6ZUX3 1019 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 BAP1Q92560 729 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 USP6NLQ92738 828 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 TMEM143Q96AN5 459 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 C16orf45Q96MC5 204 aaPredicted RBP16.63■□□□□ 0.25
ACTB-204ENST00000425660 CBWD1Q9BRT8 395 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 PPP2R2CQ9Y2T4 447 aa16.63■□□□□ 0.25
ACTB-204ENST00000425660 HOXD8P13378 290 aaPredicted RBP16.62■□□□□ 0.25
ACTB-204ENST00000425660 ACVR2BQ13705 512 aa16.62■□□□□ 0.25
ACTB-204ENST00000425660 MTF1Q14872 753 aa16.62■□□□□ 0.25
ACTB-204ENST00000425660 TSR1Q2NL82 804 aaKnown RBP16.62■□□□□ 0.25
ACTB-204ENST00000425660 DCAF17Q5H9S7 520 aaPredicted RBP16.62■□□□□ 0.25
ACTB-204ENST00000425660 DPY19L2P1Q6NXN4 242 aa16.62■□□□□ 0.25
ACTB-204ENST00000425660 INTS8Q75QN2 995 aaKnown RBP16.62■□□□□ 0.25
ACTB-204ENST00000425660 TAS1R3Q7RTX0 852 aa16.62■□□□□ 0.25
ACTB-204ENST00000425660 REXO1L1PQ8IX06 675 aa16.62■□□□□ 0.25
ACTB-204ENST00000425660 XXYLT1Q8NBI6 393 aa16.62■□□□□ 0.25
ACTB-204ENST00000425660 NEK11Q8NG66 645 aa16.62■□□□□ 0.25
ACTB-204ENST00000425660 ASAP3Q8TDY4 903 aa16.62■□□□□ 0.25
ACTB-204ENST00000425660 ZFYVE28Q9HCC9 887 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms