RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 MBOAT7Q96N66 472 aa8.15□□□□□ -1.11
SMARCC1-202ENST00000425518 MYCBPQ99417 103 aaPredicted RBP8.15□□□□□ -1.11
SMARCC1-202ENST00000425518 AZI2Q9H6S1 392 aa8.15□□□□□ -1.11
SMARCC1-202ENST00000425518 DNAJC18Q9H819 358 aa8.15□□□□□ -1.11
SMARCC1-202ENST00000425518 PARVGQ9HBI0 331 aa8.15□□□□□ -1.11
SMARCC1-202ENST00000425518 KCNQ5Q9NR82 932 aa8.15□□□□□ -1.11
SMARCC1-202ENST00000425518 ALG6Q9Y672 507 aa8.15□□□□□ -1.11
SMARCC1-202ENST00000425518 DDX60LQ5H9U9 1706 aaKnown RBP8.15□□□□□ -1.11
SMARCC1-202ENST00000425518 RGS16O15492 202 aaPredicted RBP8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 CHN1P15882 459 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 PTENP60484 403 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 IFI35P80217 286 aaPredicted RBP8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 POU5F1Q01860 360 aaKnown RBP8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 MESDQ14696 234 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 CRY2Q49AN0 593 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 Q4G0T1 1027 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 KIAA1755Q5JYT7 1200 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 JAMLQ86YT9 394 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 ATP8B4Q8TF62 1192 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 SLC20A1Q8WUM9 679 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 XPO6Q96QU8 1125 aaKnown RBP8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 NAP1L3Q99457 506 aaPredicted RBP8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 COA1Q9GZY4 146 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 UBE2TQ9NPD8 197 aaPredicted RBP8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 COG5Q9UP83 839 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 PTPN22Q9Y2R2 807 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 GOLGB1Q14789 3259 aaKnown RBP8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 CHUKO15111 745 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 TBX3O15119 743 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 FTLP02792 175 aaPredicted RBP8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 VIMP08670 466 aaKnown RBP8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 GAP43P17677 238 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 ANXA13P27216 316 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 MARCKSL1P49006 195 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 PPATQ06203 517 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 ANKRD20A8PQ5CZ79 823 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 TAX1BP1Q86VP1 789 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 HOOK3Q86VS8 718 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 NEK9Q8TD19 979 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 DCAF4Q8WV16 495 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 KRT35Q92764 455 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 CHMP6Q96FZ7 201 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 SEMA4AQ9H3S1 761 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 PKD2L1Q9P0L9 805 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 VAV3Q9UKW4 847 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 NENFQ9UMX5 172 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 NAV1Q8NEY1 1877 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 DDX39AO00148 427 aaKnown RBP8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 PPEF1O14829 653 aaPredicted RBP8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 PPFIA2O75334 1257 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 SLITRK3O94933 977 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 NDUFB10O96000 172 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 FOSP01100 380 aaPredicted RBP8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 MMEP08473 750 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 CCDC172P0C7W6 258 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 GYS1P13807 737 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 SREBF1P36956 1147 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 SCTRP47872 440 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 EIF3BP55884 814 aaKnown RBP8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 MYL7Q01449 175 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 BMT2Q1RMZ1 405 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 CCDC38Q502W7 563 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 SYDE2Q5VT97 1194 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 LRCH2Q5VUJ6 765 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 DUPD1Q68J44 220 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 MOXD1Q6UVY6 613 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 TATDN2Q93075 761 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 ZKSCAN4Q969J2 545 aaPredicted RBP8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 RNF25Q96BH1 459 aaPredicted RBP8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 HVCN1Q96D96 273 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 BORCS6Q96GS4 357 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 CARD9Q9H257 536 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 YY1AP1Q9H869 796 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 ACTR5Q9H9F9 607 aaPredicted RBP8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 DBNDD1Q9H9R9 158 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 GGA2Q9UJY4 613 aa8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 COL16A1Q07092 1604 aaPredicted RBP8.14□□□□□ -1.11
SMARCC1-202ENST00000425518 GTPBP10A4D1E9 387 aaKnown RBP8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 SRRM3A6NNA2 597 aaPredicted RBP8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 RASSF9O75901 435 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 DRD4P21917 467 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 FGFR4P22455 802 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 CRKP46108 304 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 KCNJ1P48048 391 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 E2F5Q15329 346 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 TBC1D10BQ4KMP7 808 aaPredicted RBP8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 UBAP2Q5T6F2 1119 aaKnown RBP8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 PHLDB3Q6NSJ2 640 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 SIAH1Q8IUQ4 282 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 ELAC2Q9BQ52 826 aaKnown RBP8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 PABPC3Q9H361 631 aaKnown RBP8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 AGPAT3Q9NRZ7 376 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 LRRC4BQ9NT99 713 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 APEX2Q9UBZ4 518 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 RASAL2Q9UJF2 1139 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 DBR1Q9UK59 544 aaKnown RBP8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 ANKRD62A6NC57 917 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 SLC26A4O43511 780 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 BYSLQ13895 437 aaKnown RBP8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 CYB5D1Q6P9G0 228 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms