RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 PRMT6Q96LA8 375 aaPredicted RBP3.87□□□□□ -1.79
TOP2A-201ENST00000423485 ARHGAP39Q9C0H5 1083 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 UBE2ZQ9H832 354 aaPredicted RBP3.87□□□□□ -1.79
TOP2A-201ENST00000423485 CDHR5Q9HBB8 845 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 SLAMF7Q9NQ25 335 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 ASAH2Q9NR71 780 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 LHX6Q9UPM6 363 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 MXRA5Q9NR99 2828 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 RIC1Q4ADV7 1423 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 EDC4Q6P2E9 1401 aaKnown RBP3.87□□□□□ -1.79
TOP2A-201ENST00000423485 KDRP35968 1356 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 LTBP3Q9NS15 1303 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 NDC80O14777 642 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 ADCY6O43306 1168 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 DYRK3O43781 588 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 USO1O60763 962 aaKnown RBP3.87□□□□□ -1.79
TOP2A-201ENST00000423485 GH2P01242 217 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 CYP2C8P10632 490 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 MARK3P27448 753 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 METAP2P50579 478 aaKnown RBP eCLIP3.87□□□□□ -1.792e-6■■□□□ 13.8
TOP2A-201ENST00000423485 SSRP1Q08945 709 aaKnown RBP3.87□□□□□ -1.79
TOP2A-201ENST00000423485 PTPN14Q15678 1187 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 KSR1Q8IVT5 923 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 IL22RA1Q8N6P7 574 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 GDAP1Q8TB36 358 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 GDAP1L1Q96MZ0 367 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 METTL22Q9BUU2 404 aaPredicted RBP3.87□□□□□ -1.79
TOP2A-201ENST00000423485 MIS12Q9H081 205 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 CCDC8Q9H0W5 538 aaPredicted RBP3.87□□□□□ -1.79
TOP2A-201ENST00000423485 ZFP14Q9HCL3 533 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 VTA1Q9NP79 307 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 ATP6V1DQ9Y5K8 247 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 PDE4DIPQ5VU43 2346 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 LTBP1Q14766 1721 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 CEP290O15078 2479 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 FAM86C2PA6NEL3 165 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 WTIPA6NIX2 430 aaPredicted RBP3.87□□□□□ -1.79
TOP2A-201ENST00000423485 PEX12O00623 359 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 CA4P22748 312 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 TRIP10Q15642 601 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 TRIM60Q495X7 471 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 GDF6Q6KF10 455 aaPredicted RBP3.87□□□□□ -1.79
TOP2A-201ENST00000423485 FAM43BQ6ZT52 329 aaPredicted RBP3.87□□□□□ -1.79
TOP2A-201ENST00000423485 WDR63Q8IWG1 891 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 LRRC43Q8N309 656 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 IWS1Q96ST2 819 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 IFT57Q9NWB7 429 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 IGSF9Q9P2J2 1179 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 USP25Q9UHP3 1055 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 KDM6AO15550 1401 aaPredicted RBP3.87□□□□□ -1.79
TOP2A-201ENST00000423485 PLCH1Q4KWH8 1693 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 NEMP2A6NFY4 417 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 KRT37O76014 449 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 CNTN5O94779 1100 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 TTLL1O95922 423 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 CDK4P11802 303 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 NRIP1P48552 1158 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 PLCB2Q00722 1185 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 EIF4A2Q14240 407 aaKnown RBP3.87□□□□□ -1.79
TOP2A-201ENST00000423485 ARL13BQ3SXY8 428 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 SYDE2Q5VT97 1194 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 PPP1R18Q6NYC8 613 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 GPR142Q7Z601 462 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 EFCAB13Q8IY85 973 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 LINS1Q8NG48 757 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 RSPH1Q8WYR4 309 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.87□□□□□ -1.79
TOP2A-201ENST00000423485 FAM13BQ9NYF5 915 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 STMN3Q9NZ72 180 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 ZMYM5Q9UJ78 669 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 PALD1Q9ULE6 856 aa3.87□□□□□ -1.79
TOP2A-201ENST00000423485 PIN4Q9Y237 131 aaKnown RBP3.87□□□□□ -1.79
TOP2A-201ENST00000423485 ZNF541Q9H0D2 1346 aa3.86□□□□□ -1.79
TOP2A-201ENST00000423485 PI4KAP2A4QPH2 592 aa3.86□□□□□ -1.79
TOP2A-201ENST00000423485 GAS2O43903 313 aaKnown RBP3.86□□□□□ -1.79
TOP2A-201ENST00000423485 ASMTLO95671 621 aa3.86□□□□□ -1.79
TOP2A-201ENST00000423485 IFNA2P01563 188 aa3.86□□□□□ -1.79
TOP2A-201ENST00000423485 ALPPP05187 535 aa3.86□□□□□ -1.79
TOP2A-201ENST00000423485 ADORA2AP29274 412 aa3.86□□□□□ -1.79
TOP2A-201ENST00000423485 ATICP31939 592 aa3.86□□□□□ -1.79
TOP2A-201ENST00000423485 ITGA7Q13683 1181 aa3.86□□□□□ -1.79
TOP2A-201ENST00000423485 ACAP1Q15027 740 aa3.86□□□□□ -1.79
TOP2A-201ENST00000423485 LPAL2Q16609 132 aa3.86□□□□□ -1.79
TOP2A-201ENST00000423485 SLC36A4Q6YBV0 504 aa3.86□□□□□ -1.79
TOP2A-201ENST00000423485 ACOT1Q86TX2 421 aa3.86□□□□□ -1.79
TOP2A-201ENST00000423485 PRPF39Q86UA1 669 aaKnown RBP3.86□□□□□ -1.79
TOP2A-201ENST00000423485 LSMEM2Q8N112 164 aa3.86□□□□□ -1.79
TOP2A-201ENST00000423485 MSL3Q8N5Y2 521 aaKnown RBP3.86□□□□□ -1.79
TOP2A-201ENST00000423485 PI4KAP1Q8N8J0 262 aa3.86□□□□□ -1.79
TOP2A-201ENST00000423485 CEP76Q8TAP6 659 aa3.86□□□□□ -1.79
TOP2A-201ENST00000423485 RHBDD1Q8TEB9 315 aa3.86□□□□□ -1.79
TOP2A-201ENST00000423485 L3MBTL3Q96JM7 780 aaPredicted RBP3.86□□□□□ -1.79
TOP2A-201ENST00000423485 OMDQ99983 421 aa3.86□□□□□ -1.79
TOP2A-201ENST00000423485 WDR11Q9BZH6 1224 aa3.86□□□□□ -1.79
TOP2A-201ENST00000423485 C8orf33Q9H7E9 229 aaPredicted RBP3.86□□□□□ -1.79
TOP2A-201ENST00000423485 A0A087X0B3 334 aa3.86□□□□□ -1.79
TOP2A-201ENST00000423485 TMEM8BA6NDV4 472 aa3.86□□□□□ -1.79
TOP2A-201ENST00000423485 PRR23AA6NEV1 266 aa3.86□□□□□ -1.79
TOP2A-201ENST00000423485 GOLGA8BA8MQT2 603 aa3.86□□□□□ -1.79
TOP2A-201ENST00000423485 DYNC1I1O14576 645 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms