RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 SMC4Q9NTJ3 1288 aa7.01□□□□□ -1.29
LINC00458-201ENST00000423442 POLLQ9UGP5 575 aa7.01□□□□□ -1.29
LINC00458-201ENST00000423442 SCAF8Q9UPN6 1271 aaKnown RBP7.01□□□□□ -1.29
LINC00458-201ENST00000423442 DDX60Q8IY21 1712 aaKnown RBP7.01□□□□□ -1.29
LINC00458-201ENST00000423442 PTPRCP08575 1304 aa7.01□□□□□ -1.29
LINC00458-201ENST00000423442 XDHP47989 1333 aa7.01□□□□□ -1.29
LINC00458-201ENST00000423442 RTL9Q8NET4 1388 aa7□□□□□ -1.29
LINC00458-201ENST00000423442 GRM8O00222 908 aa7□□□□□ -1.29
LINC00458-201ENST00000423442 RPS12P25398 132 aaKnown RBP7□□□□□ -1.29
LINC00458-201ENST00000423442 L1CAMP32004 1257 aa7□□□□□ -1.29
LINC00458-201ENST00000423442 CORO7P57737 925 aa7□□□□□ -1.29
LINC00458-201ENST00000423442 BEND3Q5T5X7 828 aa7□□□□□ -1.29
LINC00458-201ENST00000423442 LMBR1LQ6UX01 489 aa7□□□□□ -1.29
LINC00458-201ENST00000423442 LDHAL6AQ6ZMR3 332 aa7□□□□□ -1.29
LINC00458-201ENST00000423442 RUFY4Q6ZNE9 571 aa7□□□□□ -1.29
LINC00458-201ENST00000423442 ZDHHC15Q96MV8 337 aa7□□□□□ -1.29
LINC00458-201ENST00000423442 GREM2Q9H772 168 aa7□□□□□ -1.29
LINC00458-201ENST00000423442 FBLN5Q9UBX5 448 aa7□□□□□ -1.29
LINC00458-201ENST00000423442 HTTP42858 3142 aa7□□□□□ -1.29
LINC00458-201ENST00000423442 CENPFP49454 3210 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 SZT2Q5T011 3432 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 PLIN1O60240 522 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 ECE2O60344 883 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 NOBOXO60393 691 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 CSF1RP07333 972 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 GLI4P10075 376 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 ERCC3P19447 782 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 EN2P19622 333 aaPredicted RBP6.99□□□□□ -1.29
LINC00458-201ENST00000423442 PMLP29590 882 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 CNR2P34972 360 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 CCT4P50991 539 aaKnown RBP6.99□□□□□ -1.29
LINC00458-201ENST00000423442 FKBP1BP68106 108 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 TMCO4Q5TGY1 634 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 PRAMEF18Q5VWM3 479 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 UNC5AQ6ZN44 842 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 B3GNT8Q7Z7M8 397 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 CARFQ8N187 725 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 SSH1Q8WYL5 1049 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 NOX5Q96PH1 765 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 PLA2G12BQ9BX93 195 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 API5Q9BZZ5 524 aaKnown RBP6.99□□□□□ -1.29
LINC00458-201ENST00000423442 CNNM1Q9NRU3 951 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 MYRFQ9Y2G1 1151 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 TRIM17Q9Y577 477 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 RBBP6Q7Z6E9 1792 aaKnown RBP6.99□□□□□ -1.29
LINC00458-201ENST00000423442 ZNF521Q96K83 1311 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 SCN9AQ15858 1988 aa6.99□□□□□ -1.29
LINC00458-201ENST00000423442 LRRC37AA6NMS7 1700 aa6.98□□□□□ -1.29
LINC00458-201ENST00000423442 VIL1P09327 827 aaKnown RBP6.98□□□□□ -1.29
LINC00458-201ENST00000423442 PPP2R5DQ14738 602 aa6.98□□□□□ -1.29
LINC00458-201ENST00000423442 OTOP1Q7RTM1 612 aa6.98□□□□□ -1.29
LINC00458-201ENST00000423442 TAB3Q8N5C8 712 aaPredicted RBP6.98□□□□□ -1.29
LINC00458-201ENST00000423442 RGS22Q8NE09 1264 aa6.98□□□□□ -1.29
LINC00458-201ENST00000423442 FERD3LQ96RJ6 166 aa6.98□□□□□ -1.29
LINC00458-201ENST00000423442 TM9SF2Q99805 663 aa6.98□□□□□ -1.29
LINC00458-201ENST00000423442 MCMBPQ9BTE3 642 aa6.98□□□□□ -1.29
LINC00458-201ENST00000423442 COA1Q9GZY4 146 aa6.98□□□□□ -1.29
LINC00458-201ENST00000423442 CNOT11Q9UKZ1 510 aaKnown RBP6.98□□□□□ -1.29
LINC00458-201ENST00000423442 NOB1Q9ULX3 412 aaKnown RBP6.98□□□□□ -1.29
LINC00458-201ENST00000423442 SF3B6Q9Y3B4 125 aaKnown RBP6.98□□□□□ -1.29
LINC00458-201ENST00000423442 ZNF804BA4D1E1 1349 aa6.98□□□□□ -1.29
LINC00458-201ENST00000423442 BRCA2P51587 3418 aa6.97□□□□□ -1.29
LINC00458-201ENST00000423442 FRAT2O75474 233 aaPredicted RBP6.97□□□□□ -1.29
LINC00458-201ENST00000423442 ITGA4P13612 1032 aa6.97□□□□□ -1.29
LINC00458-201ENST00000423442 MAGEA10P43363 369 aaPredicted RBP6.97□□□□□ -1.29
LINC00458-201ENST00000423442 MMP14P50281 582 aa6.97□□□□□ -1.29
LINC00458-201ENST00000423442 ZNF280AP59817 542 aaPredicted RBP6.97□□□□□ -1.29
LINC00458-201ENST00000423442 POU4F1Q01851 419 aa6.97□□□□□ -1.29
LINC00458-201ENST00000423442 SREBF2Q12772 1141 aa6.97□□□□□ -1.29
LINC00458-201ENST00000423442 FBXW10Q5XX13 1052 aa6.97□□□□□ -1.29
LINC00458-201ENST00000423442 TTLL5Q6EMB2 1281 aa6.97□□□□□ -1.29
LINC00458-201ENST00000423442 VPS37DQ86XT2 251 aa6.97□□□□□ -1.29
LINC00458-201ENST00000423442 TRMT2AQ8IZ69 625 aaKnown RBP6.97□□□□□ -1.29
LINC00458-201ENST00000423442 SLC17A8Q8NDX2 589 aa6.97□□□□□ -1.29
LINC00458-201ENST00000423442 AGBL3Q8NEM8 1001 aa6.97□□□□□ -1.29
LINC00458-201ENST00000423442 SMARCC2Q8TAQ2 1214 aa6.97□□□□□ -1.29
LINC00458-201ENST00000423442 GIPC2Q8TF65 315 aa6.97□□□□□ -1.29
LINC00458-201ENST00000423442 FRAT1Q92837 279 aaPredicted RBP6.97□□□□□ -1.29
LINC00458-201ENST00000423442 LNPKQ9C0E8 428 aa6.97□□□□□ -1.29
LINC00458-201ENST00000423442 RWDD3Q9Y3V2 267 aa6.97□□□□□ -1.29
LINC00458-201ENST00000423442 SPEF2Q9C093 1822 aa6.97□□□□□ -1.29
LINC00458-201ENST00000423442 COL4A1P02462 1669 aa6.96□□□□□ -1.29
LINC00458-201ENST00000423442 H0YGN5 161 aa6.96□□□□□ -1.3
LINC00458-201ENST00000423442 CBFA2T2O43439 604 aa6.96□□□□□ -1.3
LINC00458-201ENST00000423442 PPP1R11O60927 126 aaPredicted RBP6.96□□□□□ -1.3
LINC00458-201ENST00000423442 TAF5LO75529 589 aa6.96□□□□□ -1.3
LINC00458-201ENST00000423442 NBPF7P0C2Y1 421 aaPredicted RBP6.96□□□□□ -1.3
LINC00458-201ENST00000423442 UBTFL1P0CB47 393 aaPredicted RBP6.96□□□□□ -1.3
LINC00458-201ENST00000423442 IMPDH2P12268 514 aa6.96□□□□□ -1.3
LINC00458-201ENST00000423442 MFAP1P55081 439 aaKnown RBP6.96□□□□□ -1.3
LINC00458-201ENST00000423442 CASP7P55210 303 aa6.96□□□□□ -1.3
LINC00458-201ENST00000423442 CHRNDQ07001 517 aa6.96□□□□□ -1.3
LINC00458-201ENST00000423442 PRKG1Q13976 671 aa6.96□□□□□ -1.3
LINC00458-201ENST00000423442 CAVIN4Q5BKX8 364 aa6.96□□□□□ -1.3
LINC00458-201ENST00000423442 ZNF804AQ7Z570 1209 aa6.96□□□□□ -1.3
LINC00458-201ENST00000423442 ARHGAP45Q92619 1136 aa6.96□□□□□ -1.3
LINC00458-201ENST00000423442 MYOZ2Q9NPC6 264 aa6.96□□□□□ -1.3
LINC00458-201ENST00000423442 SPATA6Q9NWH7 488 aaPredicted RBP6.96□□□□□ -1.3
LINC00458-201ENST00000423442 PALD1Q9ULE6 856 aa6.96□□□□□ -1.3
LINC00458-201ENST00000423442 PPT2Q9UMR5 302 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms