RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 CDC42EP1Q00587 391 aa18.81■□□□□ 0.6
COL7A1-202ENST00000422991 MBTPS1Q14703 1052 aa18.81■□□□□ 0.6
COL7A1-202ENST00000422991 DYMQ7RTS9 669 aa18.81■□□□□ 0.6
COL7A1-202ENST00000422991 ZNF410Q86VK4 478 aa18.81■□□□□ 0.6
COL7A1-202ENST00000422991 NLRP4Q96MN2 994 aa18.81■□□□□ 0.6
COL7A1-202ENST00000422991 C7orf25Q9BPX7 421 aa18.81■□□□□ 0.6
COL7A1-202ENST00000422991 DACT1Q9NYF0 836 aa18.81■□□□□ 0.6
COL7A1-202ENST00000422991 IQCF3P0C7M6 154 aa18.8■□□□□ 0.6
COL7A1-202ENST00000422991 CASP1P29466 404 aa18.8■□□□□ 0.6
COL7A1-202ENST00000422991 CRYBB1P53674 252 aaPredicted RBP18.8■□□□□ 0.6
COL7A1-202ENST00000422991 CCL23P55773 120 aa18.8■□□□□ 0.6
COL7A1-202ENST00000422991 PPP2R5AQ15172 486 aa18.8■□□□□ 0.6
COL7A1-202ENST00000422991 NLRP7Q8WX94 980 aa18.8■□□□□ 0.6
COL7A1-202ENST00000422991 ZNF668Q96K58 619 aaPredicted RBP18.8■□□□□ 0.6
COL7A1-202ENST00000422991 IFT74Q96LB3 600 aa18.8■□□□□ 0.6
COL7A1-202ENST00000422991 SCLT1Q96NL6 688 aa18.8■□□□□ 0.6
COL7A1-202ENST00000422991 OSMRQ99650 979 aa18.8■□□□□ 0.6
COL7A1-202ENST00000422991 C17orf75Q9HAS0 396 aa18.8■□□□□ 0.6
COL7A1-202ENST00000422991 CDHR5Q9HBB8 845 aa18.8■□□□□ 0.6
COL7A1-202ENST00000422991 PCDH10Q9P2E7 1040 aa18.8■□□□□ 0.6
COL7A1-202ENST00000422991 TRIOBPQ9H2D6 2365 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 A0A087WZ62 844 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.79■□□□□ 0.6
COL7A1-202ENST00000422991 FRMD3A2A2Y4 597 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 SFI1A8K8P3 1242 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 GTPBP6O43824 516 aaPredicted RBP18.79■□□□□ 0.6
COL7A1-202ENST00000422991 FAM13AO94988 1023 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 SLC34A2O95436 690 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 MYL1P05976 194 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 PRR29P0C7W0 189 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 SRGAP2CP0DJJ0 459 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 PLS3P13797 630 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 SYN1P17600 705 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 NAMPTP43490 491 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 ASIC1P78348 528 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 CUL4BQ13620 913 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 TFDP1Q14186 410 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 MFSD5Q6N075 450 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 KANK3Q6NY19 840 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 RNF149Q8NC42 400 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 SCLYQ96I15 445 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 FDXACB1Q9BRP7 624 aaPredicted RBP18.79■□□□□ 0.6
COL7A1-202ENST00000422991 BLZF1Q9H2G9 400 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 IFT122Q9HBG6 1241 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 PARVGQ9HBI0 331 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 GINS2Q9Y248 185 aa18.79■□□□□ 0.6
COL7A1-202ENST00000422991 A0A1W2PPC1 479 aa18.78■□□□□ 0.6
COL7A1-202ENST00000422991 LRRIQ4A6NIV6 560 aa18.78■□□□□ 0.6
COL7A1-202ENST00000422991 PARNO95453 639 aaKnown RBP18.78■□□□□ 0.6
COL7A1-202ENST00000422991 PHKA2P46019 1235 aa18.78■□□□□ 0.6
COL7A1-202ENST00000422991 NPTX2P47972 431 aa18.78■□□□□ 0.6
COL7A1-202ENST00000422991 PEX3P56589 373 aa18.78■□□□□ 0.6
COL7A1-202ENST00000422991 PTENP60484 403 aa18.78■□□□□ 0.6
COL7A1-202ENST00000422991 MDM2Q00987 491 aaPredicted RBP18.78■□□□□ 0.6
COL7A1-202ENST00000422991 POU5F1BQ06416 359 aa18.78■□□□□ 0.6
COL7A1-202ENST00000422991 DMP1Q13316 513 aaPredicted RBP18.78■□□□□ 0.6
COL7A1-202ENST00000422991 LPIN1Q14693 890 aa18.78■□□□□ 0.6
COL7A1-202ENST00000422991 GPNMBQ14956 572 aa18.78■□□□□ 0.6
COL7A1-202ENST00000422991 POSTNQ15063 836 aa18.78■□□□□ 0.6
COL7A1-202ENST00000422991 FBXO47Q5MNV8 452 aa18.78■□□□□ 0.6
COL7A1-202ENST00000422991 CDCA2Q69YH5 1023 aaPredicted RBP18.78■□□□□ 0.6
COL7A1-202ENST00000422991 IFNLR1Q8IU57 520 aaPredicted RBP18.78■□□□□ 0.6
COL7A1-202ENST00000422991 GPT2Q8TD30 523 aa18.78■□□□□ 0.6
COL7A1-202ENST00000422991 TMEM40Q8WWA1 233 aa18.78■□□□□ 0.6
COL7A1-202ENST00000422991 CCDC34Q96HJ3 373 aa18.78■□□□□ 0.6
COL7A1-202ENST00000422991 GDF15Q99988 308 aa18.78■□□□□ 0.6
COL7A1-202ENST00000422991 NFKBIZQ9BYH8 718 aa18.78■□□□□ 0.6
COL7A1-202ENST00000422991 OSBPL7Q9BZF2 842 aa18.78■□□□□ 0.6
COL7A1-202ENST00000422991 SQORQ9Y6N5 450 aa18.78■□□□□ 0.6
COL7A1-202ENST00000422991 TET1Q8NFU7 2136 aa18.77■□□□□ 0.6
COL7A1-202ENST00000422991 ADGRA3Q8IWK6 1321 aa18.77■□□□□ 0.6
COL7A1-202ENST00000422991 NBNO60934 754 aa18.77■□□□□ 0.6
COL7A1-202ENST00000422991 GHRP10912 638 aa18.77■□□□□ 0.6
COL7A1-202ENST00000422991 IDEP14735 1019 aa18.77■□□□□ 0.6
COL7A1-202ENST00000422991 DARSP14868 501 aaKnown RBP18.77■□□□□ 0.6
COL7A1-202ENST00000422991 GAP43P17677 238 aa18.77■□□□□ 0.6
COL7A1-202ENST00000422991 EIF4BP23588 611 aaKnown RBP18.77■□□□□ 0.6
COL7A1-202ENST00000422991 BMP8BP34820 402 aa18.77■□□□□ 0.6
COL7A1-202ENST00000422991 RFC2P35250 354 aa18.77■□□□□ 0.6
COL7A1-202ENST00000422991 ODR4Q5SWX8 454 aa18.77■□□□□ 0.6
COL7A1-202ENST00000422991 SFR1Q86XK3 245 aa18.77■□□□□ 0.6
COL7A1-202ENST00000422991 CCDC65Q8IXS2 484 aa18.77■□□□□ 0.6
COL7A1-202ENST00000422991 ELOA2Q8IYF1 753 aaPredicted RBP18.77■□□□□ 0.6
COL7A1-202ENST00000422991 SPIRE2Q8WWL2 714 aa18.77■□□□□ 0.6
COL7A1-202ENST00000422991 GCOM2Q9BZD3 368 aaPredicted RBP18.77■□□□□ 0.6
COL7A1-202ENST00000422991 ZHX3Q9H4I2 956 aa18.77■□□□□ 0.6
COL7A1-202ENST00000422991 LARSQ9P2J5 1176 aaKnown RBP18.77■□□□□ 0.6
COL7A1-202ENST00000422991 CXCL10P02778 98 aa18.76■□□□□ 0.59
COL7A1-202ENST00000422991 MAGEA10P43363 369 aaPredicted RBP18.76■□□□□ 0.59
COL7A1-202ENST00000422991 DPYDQ12882 1025 aa18.76■□□□□ 0.59
COL7A1-202ENST00000422991 COASYQ13057 564 aa18.76■□□□□ 0.59
COL7A1-202ENST00000422991 TSHZ1Q6ZSZ6 1077 aa18.76■□□□□ 0.59
COL7A1-202ENST00000422991 UNC13DQ70J99 1090 aa18.76■□□□□ 0.59
COL7A1-202ENST00000422991 SRGAP1Q7Z6B7 1085 aa18.76■□□□□ 0.59
COL7A1-202ENST00000422991 TMEM199Q8N511 208 aa18.76■□□□□ 0.59
COL7A1-202ENST00000422991 MYCT1Q8N699 235 aa18.76■□□□□ 0.59
COL7A1-202ENST00000422991 DEPTORQ8TB45 409 aa18.76■□□□□ 0.59
COL7A1-202ENST00000422991 BADQ92934 168 aa18.76■□□□□ 0.59
COL7A1-202ENST00000422991 VWCEQ96DN2 955 aa18.76■□□□□ 0.59
COL7A1-202ENST00000422991 FIZ1Q96SL8 496 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms