RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 CNNM3Q8NE01 707 aa9.65□□□□□ -0.86
MDC1-204ENST00000422266 PGBD4Q96DM1 585 aa9.65□□□□□ -0.86
MDC1-204ENST00000422266 NLRP4Q96MN2 994 aa9.65□□□□□ -0.86
MDC1-204ENST00000422266 MTMR9Q96QG7 549 aa9.65□□□□□ -0.86
MDC1-204ENST00000422266 CEP89Q96ST8 783 aa9.65□□□□□ -0.86
MDC1-204ENST00000422266 CDCA3Q99618 268 aaPredicted RBP9.65□□□□□ -0.86
MDC1-204ENST00000422266 EIF2AK1Q9BQI3 630 aaKnown RBP9.65□□□□□ -0.86
MDC1-204ENST00000422266 TUFT1Q9NNX1 390 aa9.65□□□□□ -0.86
MDC1-204ENST00000422266 GJB4Q9NTQ9 266 aa9.65□□□□□ -0.86
MDC1-204ENST00000422266 LZTS1Q9Y250 596 aa9.65□□□□□ -0.86
MDC1-204ENST00000422266 CUL9Q8IWT3 2517 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 A0A087WZ62 844 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 ZNF623O75123 536 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 ERLIN2O94905 339 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 SLITRK3O94933 977 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 LINC00271P0C7V0 271 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 MCM7P33993 719 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 ALDH7A1P49419 539 aaKnown RBP9.64□□□□□ -0.87
MDC1-204ENST00000422266 CYP4A11Q02928 519 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 TFF2Q03403 129 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 SPIRE1Q08AE8 756 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 EMC2Q15006 297 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 TCEAL5Q5H9L2 206 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 EARS2Q5JPH6 523 aaKnown RBP9.64□□□□□ -0.87
MDC1-204ENST00000422266 NOSTRINQ8IVI9 506 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 THNSL1Q8IYQ7 743 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 HACE1Q8IYU2 909 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 KLHL23Q8NBE8 558 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 MCPH1Q8NEM0 835 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 CCDC51Q96ER9 411 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 DYDC2Q96IM9 177 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 ZNF558Q96NG5 402 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 HSD17B14Q9BPX1 270 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 FDXACB1Q9BRP7 624 aaPredicted RBP9.64□□□□□ -0.87
MDC1-204ENST00000422266 NGRNQ9NPE2 291 aaKnown RBP9.64□□□□□ -0.87
MDC1-204ENST00000422266 UBN1Q9NPG3 1134 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 RGL1Q9NZL6 768 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 KANSL3Q9P2N6 904 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 PIN4Q9Y237 131 aaKnown RBP9.64□□□□□ -0.87
MDC1-204ENST00000422266 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.64□□□□□ -0.87
MDC1-204ENST00000422266 WDR81Q562E7 1941 aa9.64□□□□□ -0.87
MDC1-204ENST00000422266 COL4A4P53420 1690 aaPredicted RBP9.64□□□□□ -0.87
MDC1-204ENST00000422266 VCANP13611 3396 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 LOXHD1Q8IVV2 1947 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 GRM6O15303 877 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 ITGB1P05556 798 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 OR52Z1P0C646 297 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 IBSPP21815 317 aaPredicted RBP9.63□□□□□ -0.87
MDC1-204ENST00000422266 KCNA5P22460 613 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 NPEPPSP55786 919 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 PLCB3Q01970 1234 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 LAMTOR4Q0VGL1 99 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 CTTNQ14247 550 aaKnown RBP9.63□□□□□ -0.87
MDC1-204ENST00000422266 PDIA5Q14554 519 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 COL19A1Q14993 1142 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 TTC38Q5R3I4 469 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 FAM102BQ5T8I3 360 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 PLA2G4FQ68DD2 849 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 GLB1LQ6UWU2 654 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 FERMT3Q86UX7 667 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 KCTD17Q8N5Z5 321 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 SPPL3Q8TCT6 385 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 MICAL1Q8TDZ2 1067 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 POF1BQ8WVV4 589 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 PRPF31Q8WWY3 499 aaKnown RBP9.63□□□□□ -0.87
MDC1-204ENST00000422266 NACC1Q96RE7 527 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 POP1Q99575 1024 aaKnown RBP9.63□□□□□ -0.87
MDC1-204ENST00000422266 POLR3CQ9BUI4 534 aaPredicted RBP9.63□□□□□ -0.87
MDC1-204ENST00000422266 NFKBIZQ9BYH8 718 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 ALG13Q9NP73 1137 aaKnown RBP9.63□□□□□ -0.87
MDC1-204ENST00000422266 TLR9Q9NR96 1032 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 AGPAT5Q9NUQ2 364 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 TYW1Q9NV66 732 aaKnown RBP9.63□□□□□ -0.87
MDC1-204ENST00000422266 PRKAG3Q9UGI9 489 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 NLRC5Q86WI3 1866 aa9.63□□□□□ -0.87
MDC1-204ENST00000422266 CNTNAP2Q9UHC6 1331 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 TRANK1O15050 2925 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 FGF18O76093 207 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 SRGAP2CP0DJJ0 459 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 FGFR1P11362 822 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 ATP2B1P20020 1258 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 U2AF2P26368 475 aaKnown RBP eCLIP9.62□□□□□ -0.87
MDC1-204ENST00000422266 RPA1P27694 616 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 RARRES1P49788 294 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 KCNQ1P51787 676 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 FOSBP53539 338 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 GUCY1B3Q02153 619 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 DRP2Q13474 957 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 GIT2Q14161 759 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 PTCRAQ6ISU1 281 aaPredicted RBP9.62□□□□□ -0.87
MDC1-204ENST00000422266 NOTUMQ6P988 496 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 KCNT2Q6UVM3 1135 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 EP400NLQ6ZTU2 488 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 ZNF598Q86UK7 904 aaKnown RBP9.62□□□□□ -0.87
MDC1-204ENST00000422266 COLGALT1Q8NBJ5 622 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 RNF149Q8NC42 400 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 RNF169Q8NCN4 708 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 URGCPQ8TCY9 931 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 MRPS27Q92552 414 aaKnown RBP9.62□□□□□ -0.87
MDC1-204ENST00000422266 CASD1Q96PB1 797 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms