RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 MBLAC2Q68D91 279 aa6.56□□□□□ -1.36
SFXN1-202ENST00000421887 RGMBQ6NW40 437 aa6.56□□□□□ -1.36
SFXN1-202ENST00000421887 NBPF5PQ86XG9 351 aaPredicted RBP6.56□□□□□ -1.36
SFXN1-202ENST00000421887 KIAA0825Q8IV33 1275 aa6.56□□□□□ -1.36
SFXN1-202ENST00000421887 TTC5Q8N0Z6 440 aa6.56□□□□□ -1.36
SFXN1-202ENST00000421887 DPF3Q92784 378 aa6.56□□□□□ -1.36
SFXN1-202ENST00000421887 SIN3AQ96ST3 1273 aa6.56□□□□□ -1.36
SFXN1-202ENST00000421887 SPON2Q9BUD6 331 aa6.56□□□□□ -1.36
SFXN1-202ENST00000421887 GLIS2Q9BZE0 524 aaPredicted RBP6.56□□□□□ -1.36
SFXN1-202ENST00000421887 TMX4Q9H1E5 349 aaPredicted RBP6.56□□□□□ -1.36
SFXN1-202ENST00000421887 MEGF9Q9H1U4 602 aa6.56□□□□□ -1.36
SFXN1-202ENST00000421887 WDR26Q9H7D7 661 aa6.56□□□□□ -1.36
SFXN1-202ENST00000421887 SLC52A2Q9HAB3 445 aa6.56□□□□□ -1.36
SFXN1-202ENST00000421887 BARX1Q9HBU1 254 aaPredicted RBP6.56□□□□□ -1.36
SFXN1-202ENST00000421887 RNF186Q9NXI6 227 aa6.56□□□□□ -1.36
SFXN1-202ENST00000421887 CGGBP1Q9UFW8 167 aaPredicted RBP6.56□□□□□ -1.36
SFXN1-202ENST00000421887 EIF5P55010 431 aaKnown RBP6.55□□□□□ -1.36
SFXN1-202ENST00000421887 KIF23Q02241 960 aaPredicted RBP6.55□□□□□ -1.36
SFXN1-202ENST00000421887 NFATC3Q12968 1075 aa6.55□□□□□ -1.36
SFXN1-202ENST00000421887 SLC39A6Q13433 755 aa6.55□□□□□ -1.36
SFXN1-202ENST00000421887 GNPTABQ3T906 1256 aa6.55□□□□□ -1.36
SFXN1-202ENST00000421887 MIIPQ5JXC2 388 aa6.55□□□□□ -1.36
SFXN1-202ENST00000421887 NIM1KQ8IY84 436 aa6.55□□□□□ -1.36
SFXN1-202ENST00000421887 KLHL36Q8N4N3 616 aa6.55□□□□□ -1.36
SFXN1-202ENST00000421887 C2orf69Q8N8R5 385 aa6.55□□□□□ -1.36
SFXN1-202ENST00000421887 ZCCHC14Q8WYQ9 949 aaKnown RBP6.55□□□□□ -1.36
SFXN1-202ENST00000421887 GNRHR2Q96P88 292 aa6.55□□□□□ -1.36
SFXN1-202ENST00000421887 ADOQ96SZ5 270 aa6.55□□□□□ -1.36
SFXN1-202ENST00000421887 PSMD1Q99460 953 aa6.55□□□□□ -1.36
SFXN1-202ENST00000421887 SUGT1Q9Y2Z0 365 aa6.55□□□□□ -1.36
SFXN1-202ENST00000421887 CYP7B1O75881 506 aa6.54□□□□□ -1.36
SFXN1-202ENST00000421887 PLS3P13797 630 aa6.54□□□□□ -1.36
SFXN1-202ENST00000421887 TNNT2P45379 298 aaPredicted RBP6.54□□□□□ -1.36
SFXN1-202ENST00000421887 NANOS3P60323 173 aaKnown RBP6.54□□□□□ -1.36
SFXN1-202ENST00000421887 RBM10P98175 930 aaKnown RBP6.54□□□□□ -1.36
SFXN1-202ENST00000421887 USP39Q53GS9 565 aaKnown RBP6.54□□□□□ -1.36
SFXN1-202ENST00000421887 TRMT10BQ6PF06 316 aaKnown RBP6.54□□□□□ -1.36
SFXN1-202ENST00000421887 OLFM4Q6UX06 510 aa6.54□□□□□ -1.36
SFXN1-202ENST00000421887 RNF207Q6ZRF8 634 aa6.54□□□□□ -1.36
SFXN1-202ENST00000421887 ZNF503Q96F45 646 aa6.54□□□□□ -1.36
SFXN1-202ENST00000421887 BCL2L13Q9BXK5 485 aa6.54□□□□□ -1.36
SFXN1-202ENST00000421887 TEX13AQ9BXU3 409 aaPredicted RBP6.54□□□□□ -1.36
SFXN1-202ENST00000421887 TRIM8Q9BZR9 551 aa6.54□□□□□ -1.36
SFXN1-202ENST00000421887 KLHL25Q9H0H3 589 aa6.54□□□□□ -1.36
SFXN1-202ENST00000421887 GPRC5CQ9NQ84 441 aa6.54□□□□□ -1.36
SFXN1-202ENST00000421887 GPRC5DQ9NZD1 345 aa6.54□□□□□ -1.36
SFXN1-202ENST00000421887 POLKQ9UBT6 870 aa6.54□□□□□ -1.36
SFXN1-202ENST00000421887 ZNF652Q9Y2D9 606 aa6.54□□□□□ -1.36
SFXN1-202ENST00000421887 POLR2AP24928 1970 aaKnown RBP6.53□□□□□ -1.36
SFXN1-202ENST00000421887 IL6STP40189 918 aaPredicted RBP6.53□□□□□ -1.36
SFXN1-202ENST00000421887 PURAQ00577 322 aaKnown RBP6.53□□□□□ -1.36
SFXN1-202ENST00000421887 FBXO46Q6PJ61 603 aaPredicted RBP6.53□□□□□ -1.36
SFXN1-202ENST00000421887 TESK2Q96S53 571 aa6.53□□□□□ -1.36
SFXN1-202ENST00000421887 H7C1D1 291 aa6.52□□□□□ -1.37
SFXN1-202ENST00000421887 PPIP5K2O43314 1243 aa6.52□□□□□ -1.37
SFXN1-202ENST00000421887 EPHX1P07099 455 aa6.52□□□□□ -1.37
SFXN1-202ENST00000421887 FPR2P25090 351 aa6.52□□□□□ -1.37
SFXN1-202ENST00000421887 SLC6A11P48066 632 aa6.52□□□□□ -1.37
SFXN1-202ENST00000421887 DPTQ07507 201 aa6.52□□□□□ -1.37
SFXN1-202ENST00000421887 DNAJC14Q6Y2X3 702 aaPredicted RBP6.52□□□□□ -1.37
SFXN1-202ENST00000421887 SND1Q7KZF4 910 aaKnown RBP eCLIP6.52□□□□□ -1.37
SFXN1-202ENST00000421887 RPGRQ92834 1020 aaKnown RBP6.52□□□□□ -1.37
SFXN1-202ENST00000421887 GBA2Q9HCG7 927 aaPredicted RBP6.52□□□□□ -1.37
SFXN1-202ENST00000421887 PCDHB10Q9UN67 800 aa6.52□□□□□ -1.37
SFXN1-202ENST00000421887 ZFR2Q9UPR6 939 aaKnown RBP6.52□□□□□ -1.37
SFXN1-202ENST00000421887 UBR2Q8IWV8 1755 aa6.52□□□□□ -1.37
SFXN1-202ENST00000421887 CDHR2Q9BYE9 1310 aa6.51□□□□□ -1.37
SFXN1-202ENST00000421887 PCSK5Q92824 1860 aa6.51□□□□□ -1.37
SFXN1-202ENST00000421887 FOXS1O43638 330 aa6.51□□□□□ -1.37
SFXN1-202ENST00000421887 MCM7P33993 719 aa6.51□□□□□ -1.37
SFXN1-202ENST00000421887 GRB10Q13322 594 aa6.51□□□□□ -1.37
SFXN1-202ENST00000421887 LSM12Q3MHD2 195 aaKnown RBP6.51□□□□□ -1.37
SFXN1-202ENST00000421887 SULT6B1Q6IMI4 303 aa6.51□□□□□ -1.37
SFXN1-202ENST00000421887 CLEC4GQ6UXB4 293 aa6.51□□□□□ -1.37
SFXN1-202ENST00000421887 ARHGEF39Q8N4T4 335 aa6.51□□□□□ -1.37
SFXN1-202ENST00000421887 GIMAP8Q8ND71 665 aaPredicted RBP6.51□□□□□ -1.37
SFXN1-202ENST00000421887 DCPSQ96C86 337 aaKnown RBP6.51□□□□□ -1.37
SFXN1-202ENST00000421887 TOE1Q96GM8 510 aaKnown RBP6.51□□□□□ -1.37
SFXN1-202ENST00000421887 LRRC37BQ96QE4 947 aa6.51□□□□□ -1.37
SFXN1-202ENST00000421887 MMP19Q99542 508 aa6.51□□□□□ -1.37
SFXN1-202ENST00000421887 PGAP2Q9UHJ9 254 aa6.51□□□□□ -1.37
SFXN1-202ENST00000421887 PPT2Q9UMR5 302 aa6.51□□□□□ -1.37
SFXN1-202ENST00000421887 NPC1L1Q9UHC9 1359 aa6.5□□□□□ -1.37
SFXN1-202ENST00000421887 A0A087X1B8 175 aa6.5□□□□□ -1.37
SFXN1-202ENST00000421887 KLRG2A4D1S0 409 aaPredicted RBP6.5□□□□□ -1.37
SFXN1-202ENST00000421887 TCERG1O14776 1098 aaKnown RBP6.5□□□□□ -1.37
SFXN1-202ENST00000421887 RNMTO43148 476 aaKnown RBP6.5□□□□□ -1.37
SFXN1-202ENST00000421887 NARSO43776 548 aaKnown RBP6.5□□□□□ -1.37
SFXN1-202ENST00000421887 PPFIA2O75334 1257 aa6.5□□□□□ -1.37
SFXN1-202ENST00000421887 CAMTA2O94983 1202 aa6.5□□□□□ -1.37
SFXN1-202ENST00000421887 GMPSP49915 693 aaPredicted RBP6.5□□□□□ -1.37
SFXN1-202ENST00000421887 PTH1RQ03431 593 aa6.5□□□□□ -1.37
SFXN1-202ENST00000421887 SCRN1Q12765 414 aa6.5□□□□□ -1.37
SFXN1-202ENST00000421887 TNIP1Q15025 636 aa6.5□□□□□ -1.37
SFXN1-202ENST00000421887 INF2Q27J81 1249 aa6.5□□□□□ -1.37
SFXN1-202ENST00000421887 MROH9Q5TGP6 573 aa6.5□□□□□ -1.37
SFXN1-202ENST00000421887 TCTN3Q6NUS6 607 aa6.5□□□□□ -1.37
SFXN1-202ENST00000421887 KRT26Q7Z3Y9 468 aa6.5□□□□□ -1.37
SFXN1-202ENST00000421887 SUPT20HQ8NEM7 779 aa6.5□□□□□ -1.37
SFXN1-202ENST00000421887 EXTL1Q92935 676 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms