RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 RSPH3Q86UC2 560 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 RNF149Q8NC42 400 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 NLRP7Q8WX94 980 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 SMARCE1Q969G3 411 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 IFT74Q96LB3 600 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 SCLT1Q96NL6 688 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 TBC1D7Q9P0N9 293 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 PCDH10Q9P2E7 1040 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 LARSQ9P2J5 1176 aaKnown RBP17.36■□□□□ 0.37
DDX55-203ENST00000421670 ADGRA3Q8IWK6 1321 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 A0A087WZ62 844 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 CCDC169A6NNP5 214 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 GPR32O75388 356 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 SMC2O95347 1197 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 CLTBP09497 229 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 CKBP12277 381 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 NPTX2P47972 431 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 MRPS6P82932 125 aaKnown RBP17.36■□□□□ 0.37
DDX55-203ENST00000421670 SKOR2Q2VWA4 1001 aaPredicted RBP17.36■□□□□ 0.37
DDX55-203ENST00000421670 SPATA20Q8TB22 786 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 OSMRQ99650 979 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 FDXACB1Q9BRP7 624 aaPredicted RBP17.36■□□□□ 0.37
DDX55-203ENST00000421670 FGFBP2Q9BYJ0 223 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 CDHR5Q9HBB8 845 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 EXOC1Q9NV70 894 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 CDY2AQ9Y6F7 541 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 UMODL1Q5DID0 1318 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 PVALEFA0A1B0GWK0 134 aa17.35■□□□□ 0.37
DDX55-203ENST00000421670 GAP43P17677 238 aa17.35■□□□□ 0.37
DDX55-203ENST00000421670 NMT1P30419 496 aaKnown RBP17.35■□□□□ 0.37
DDX55-203ENST00000421670 NAMPTP43490 491 aa17.35■□□□□ 0.37
DDX55-203ENST00000421670 EHHADHQ08426 723 aa17.35■□□□□ 0.37
DDX55-203ENST00000421670 PPP2R5AQ15172 486 aa17.35■□□□□ 0.37
DDX55-203ENST00000421670 ZNF618Q5T7W0 954 aa17.35■□□□□ 0.37
DDX55-203ENST00000421670 RPAINQ86UA6 219 aa17.35■□□□□ 0.37
DDX55-203ENST00000421670 FAM178BQ8IXR5 827 aa17.35■□□□□ 0.37
DDX55-203ENST00000421670 NME8Q8N427 588 aa17.35■□□□□ 0.37
DDX55-203ENST00000421670 GLIS3Q8NEA6 775 aa17.35■□□□□ 0.37
DDX55-203ENST00000421670 FIZ1Q96SL8 496 aa17.35■□□□□ 0.37
DDX55-203ENST00000421670 NOC4LQ9BVI4 516 aaKnown RBP17.35■□□□□ 0.37
DDX55-203ENST00000421670 PPP1R12CQ9BZL4 782 aa17.35■□□□□ 0.37
DDX55-203ENST00000421670 HIPK3Q9H422 1215 aa17.35■□□□□ 0.37
DDX55-203ENST00000421670 C17orf75Q9HAS0 396 aa17.35■□□□□ 0.37
DDX55-203ENST00000421670 KMT5AQ9NQR1 393 aa17.35■□□□□ 0.37
DDX55-203ENST00000421670 PRDM5Q9NQX1 630 aaPredicted RBP17.35■□□□□ 0.37
DDX55-203ENST00000421670 KIAA1468Q9P260 1216 aa17.35■□□□□ 0.37
DDX55-203ENST00000421670 TBX21Q9UL17 535 aa17.35■□□□□ 0.37
DDX55-203ENST00000421670 K7ENM7 598 aa17.34■□□□□ 0.37
DDX55-203ENST00000421670 BIN1O00499 593 aa17.34■□□□□ 0.37
DDX55-203ENST00000421670 SLC16A4O15374 487 aa17.34■□□□□ 0.37
DDX55-203ENST00000421670 ASAP2O43150 1006 aa17.34■□□□□ 0.37
DDX55-203ENST00000421670 CSDE1O75534 798 aaKnown RBP17.34■□□□□ 0.37
DDX55-203ENST00000421670 CHRNA1P02708 482 aa17.34■□□□□ 0.37
DDX55-203ENST00000421670 MGAT3Q09327 533 aa17.34■□□□□ 0.37
DDX55-203ENST00000421670 TFDP1Q14186 410 aa17.34■□□□□ 0.37
DDX55-203ENST00000421670 FAM26FQ5R3K3 315 aa17.34■□□□□ 0.37
DDX55-203ENST00000421670 ISM2Q6H9L7 571 aa17.34■□□□□ 0.37
DDX55-203ENST00000421670 CCDC155Q8N6L0 562 aa17.34■□□□□ 0.37
DDX55-203ENST00000421670 CAGE1Q8TC20 777 aa17.34■□□□□ 0.37
DDX55-203ENST00000421670 SYAP1Q96A49 352 aaPredicted RBP17.34■□□□□ 0.37
DDX55-203ENST00000421670 ADAMTS10Q9H324 1103 aa17.34■□□□□ 0.37
DDX55-203ENST00000421670 MRPL44Q9H9J2 332 aaKnown RBP17.34■□□□□ 0.37
DDX55-203ENST00000421670 IFT122Q9HBG6 1241 aa17.34■□□□□ 0.37
DDX55-203ENST00000421670 OLFML3Q9NRN5 406 aa17.34■□□□□ 0.37
DDX55-203ENST00000421670 TMEM39AQ9NV64 488 aa17.34■□□□□ 0.37
DDX55-203ENST00000421670 SEL1LQ9UBV2 794 aa17.34■□□□□ 0.37
DDX55-203ENST00000421670 TRPV2Q9Y5S1 764 aa17.34■□□□□ 0.37
DDX55-203ENST00000421670 TET1Q8NFU7 2136 aa17.34■□□□□ 0.37
DDX55-203ENST00000421670 M0QZ92 97 aa17.33■□□□□ 0.37
DDX55-203ENST00000421670 RHOBTB3O94955 611 aa17.33■□□□□ 0.37
DDX55-203ENST00000421670 RPLP2P05387 115 aaKnown RBP17.33■□□□□ 0.37
DDX55-203ENST00000421670 SARSP49591 514 aaKnown RBP17.33■□□□□ 0.37
DDX55-203ENST00000421670 CASP5P51878 434 aa17.33■□□□□ 0.37
DDX55-203ENST00000421670 NCKAP1LP55160 1127 aa17.33■□□□□ 0.37
DDX55-203ENST00000421670 RBL2Q08999 1139 aa17.33■□□□□ 0.37
DDX55-203ENST00000421670 NT5DC1Q5TFE4 455 aa17.33■□□□□ 0.37
DDX55-203ENST00000421670 TRAF7Q6Q0C0 670 aa17.33■□□□□ 0.37
DDX55-203ENST00000421670 ZNF410Q86VK4 478 aa17.33■□□□□ 0.37
DDX55-203ENST00000421670 C7orf61Q8IZ16 206 aa17.33■□□□□ 0.37
DDX55-203ENST00000421670 DEPTORQ8TB45 409 aa17.33■□□□□ 0.37
DDX55-203ENST00000421670 TMEM40Q8WWA1 233 aa17.33■□□□□ 0.37
DDX55-203ENST00000421670 SPIRE2Q8WWL2 714 aa17.33■□□□□ 0.37
DDX55-203ENST00000421670 GSDMAQ96QA5 445 aa17.33■□□□□ 0.37
DDX55-203ENST00000421670 CELF4Q9BZC1 486 aaKnown RBP17.33■□□□□ 0.37
DDX55-203ENST00000421670 MINDY3Q9H8M7 445 aa17.33■□□□□ 0.37
DDX55-203ENST00000421670 SLC39A2Q9NP94 309 aa17.33■□□□□ 0.37
DDX55-203ENST00000421670 MAN1B1Q9UKM7 699 aa17.33■□□□□ 0.37
DDX55-203ENST00000421670 PITPNM1O00562 1244 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 CAND2O75155 1236 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 PHKA2P46019 1235 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 SMTNP53814 917 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 STK4Q13043 487 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 BFSP2Q13515 415 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 KCNB1Q14721 858 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 ZC2HC1CQ53FD0 456 aaPredicted RBP17.32■□□□□ 0.36
DDX55-203ENST00000421670 CDCA2Q69YH5 1023 aaPredicted RBP17.32■□□□□ 0.36
DDX55-203ENST00000421670 RBM43Q6ZSC3 357 aaKnown RBP17.32■□□□□ 0.36
DDX55-203ENST00000421670 LRRC8DQ7L1W4 858 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 SMYD4Q8IYR2 804 aaPredicted RBP17.32■□□□□ 0.36
DDX55-203ENST00000421670 KIAA0895Q8NCT3 520 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms