RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 CNGA3Q16281 694 aa13.16□□□□□ -0.3
CLCN4-203ENST00000421085 BZW1Q7L1Q6 419 aaKnown RBP13.16□□□□□ -0.3
CLCN4-203ENST00000421085 CYB5R4Q7L1T6 521 aa13.16□□□□□ -0.3
CLCN4-203ENST00000421085 ABCF3Q9NUQ8 709 aa13.16□□□□□ -0.3
CLCN4-203ENST00000421085 HEY1Q9Y5J3 304 aa13.16□□□□□ -0.3
CLCN4-203ENST00000421085 STK36Q9NRP7 1315 aa13.16□□□□□ -0.3
CLCN4-203ENST00000421085 AGTP01019 485 aa13.16□□□□□ -0.3
CLCN4-203ENST00000421085 ALDH18A1P54886 795 aaKnown RBP13.16□□□□□ -0.3
CLCN4-203ENST00000421085 MED21Q13503 144 aa13.16□□□□□ -0.3
CLCN4-203ENST00000421085 NCAPG2Q86XI2 1143 aa13.16□□□□□ -0.3
CLCN4-203ENST00000421085 SFR1Q86XK3 245 aa13.16□□□□□ -0.3
CLCN4-203ENST00000421085 CCNYL1Q8N7R7 359 aa13.16□□□□□ -0.3
CLCN4-203ENST00000421085 RAD54LQ92698 747 aa13.16□□□□□ -0.3
CLCN4-203ENST00000421085 LRRC4Q9HBW1 653 aa13.16□□□□□ -0.3
CLCN4-203ENST00000421085 SLC40A1Q9NP59 571 aa13.16□□□□□ -0.3
CLCN4-203ENST00000421085 LIMA1Q9UHB6 759 aaKnown RBP13.16□□□□□ -0.3
CLCN4-203ENST00000421085 KDM5CP41229 1560 aa13.16□□□□□ -0.3
CLCN4-203ENST00000421085 A0A1W2PQC6 194 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 NEDD4P46934 1319 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 COASYQ13057 564 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 FAM47CQ5HY64 1035 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 TBC1D9BQ66K14 1250 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 KRT27Q7Z3Y8 459 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 TBC1D10CQ8IV04 446 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 PIGOQ8TEQ8 1089 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 ATG3Q9NT62 314 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 GCLMP48507 274 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 MRPS15P82914 257 aaKnown RBP13.15□□□□□ -0.3
CLCN4-203ENST00000421085 MTERF2Q49AM1 385 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 LRIG3Q6UXM1 1119 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 ZNF233A6NK53 670 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 XPOTO43592 962 aaKnown RBP13.15□□□□□ -0.3
CLCN4-203ENST00000421085 CCDC159P0C7I6 412 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 KRT4P19013 534 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 ZNF394Q53GI3 561 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 IZUMO3Q5VZ72 239 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 CATSPER3Q86XQ3 398 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 MARCH10Q8NA82 808 aaPredicted RBP13.15□□□□□ -0.3
CLCN4-203ENST00000421085 CHP1Q99653 195 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 SEC31BQ9NQW1 1179 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 ABCD1P33897 745 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 KCNJ6P48051 423 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 IRAK1P51617 712 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 ZNF746Q6NUN9 644 aaPredicted RBP13.15□□□□□ -0.3
CLCN4-203ENST00000421085 AGGF1Q8N302 714 aaeCLIP13.15□□□□□ -0.3
CLCN4-203ENST00000421085 RNF217Q8TC41 542 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 WNT8AQ9H1J5 351 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 CD248Q9HCU0 757 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 MLH3Q9UHC1 1453 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 PEX3P56589 373 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 KRT17Q04695 432 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 CAPRIN1Q14444 709 aaKnown RBP13.15□□□□□ -0.3
CLCN4-203ENST00000421085 DRAP1Q14919 205 aaPredicted RBP13.15□□□□□ -0.3
CLCN4-203ENST00000421085 TRPM8Q7Z2W7 1104 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 MXD3Q9BW11 206 aa13.15□□□□□ -0.3
CLCN4-203ENST00000421085 PNMA6FA0A0J9YX94 578 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 TRPC1P48995 793 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 AARSP49588 968 aaKnown RBP eCLIP13.14□□□□□ -0.31
CLCN4-203ENST00000421085 AP1B1Q10567 949 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 KIF2BQ8N4N8 673 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 CYFIP2Q96F07 1278 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 RPS6KC1Q96S38 1066 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 ASCC2Q9H1I8 757 aaPredicted RBP13.14□□□□□ -0.31
CLCN4-203ENST00000421085 DAB1O75553 588 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 LRRC8EQ6NSJ5 796 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 PDXDC1Q6P996 788 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 SIX6OS1Q8N1H7 587 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 OR2W6PQ8NHA6 318 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 DNAJC9Q8WXX5 260 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.14□□□□□ -0.31
CLCN4-203ENST00000421085 MSTO1Q9BUK6 570 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 WWP1Q9H0M0 922 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 PNMA2Q9UL42 364 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 PVALEFA0A1B0GWK0 134 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 GTPBP10A4D1E9 387 aaKnown RBP13.14□□□□□ -0.31
CLCN4-203ENST00000421085 PAMP19021 973 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 HOXA13P31271 388 aaPredicted RBP13.14□□□□□ -0.31
CLCN4-203ENST00000421085 ATP11CQ8NB49 1132 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 CATSPER1Q8NEC5 780 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 XPO6Q96QU8 1125 aaKnown RBP13.14□□□□□ -0.31
CLCN4-203ENST00000421085 NPHS2Q9NP85 383 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 DBR1Q9UK59 544 aaKnown RBP13.14□□□□□ -0.31
CLCN4-203ENST00000421085 RASGRP2Q7LDG7 609 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 NIM1KQ8IY84 436 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 RNPC3Q96LT9 517 aaKnown RBP13.14□□□□□ -0.31
CLCN4-203ENST00000421085 C11orf70Q9BRQ4 267 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 KIF28PB7ZC32 967 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 NSUN2Q08J23 767 aaKnown RBP eCLIP13.14□□□□□ -0.31
CLCN4-203ENST00000421085 SYDE2Q5VT97 1194 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 BRIP1Q9BX63 1249 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 TRABDQ9H4I3 376 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 TRIM10Q9UDY6 481 aa13.14□□□□□ -0.31
CLCN4-203ENST00000421085 GDF11O95390 407 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 CEP55Q53EZ4 464 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 TMC4Q7Z404 712 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 AGR3Q8TD06 166 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 FAM193BQ96PV7 902 aaPredicted RBP13.13□□□□□ -0.31
CLCN4-203ENST00000421085 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.13□□□□□ -0.31
CLCN4-203ENST00000421085 TEKT2Q9UIF3 430 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 CPSF3Q9UKF6 684 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms