RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 MTERF2Q49AM1 385 aa14.54□□□□□ -0.08
LINC00339-203ENST00000420503 ODR4Q5SWX8 454 aa14.54□□□□□ -0.08
LINC00339-203ENST00000420503 RNF20Q5VTR2 975 aa14.54□□□□□ -0.08
LINC00339-203ENST00000420503 VPS52Q8N1B4 723 aa14.54□□□□□ -0.08
LINC00339-203ENST00000420503 NLRP7Q8WX94 980 aa14.54□□□□□ -0.08
LINC00339-203ENST00000420503 CASP10Q92851 521 aa14.54□□□□□ -0.08
LINC00339-203ENST00000420503 ZBP1Q9H171 429 aa14.54□□□□□ -0.08
LINC00339-203ENST00000420503 C6orf50Q9HD87 102 aa14.54□□□□□ -0.08
LINC00339-203ENST00000420503 DNAJB4Q9UDY4 337 aa14.54□□□□□ -0.08
LINC00339-203ENST00000420503 LIMD1Q9UGP4 676 aa14.54□□□□□ -0.08
LINC00339-203ENST00000420503 TCEAL9Q9UHQ7 104 aa14.54□□□□□ -0.08
LINC00339-203ENST00000420503 INPP5FQ9Y2H2 1132 aa14.54□□□□□ -0.08
LINC00339-203ENST00000420503 GVINP1Q7Z2Y8 2422 aa14.53□□□□□ -0.08
LINC00339-203ENST00000420503 A0A087WZ62 844 aa14.53□□□□□ -0.08
LINC00339-203ENST00000420503 PRPF3O43395 683 aaKnown RBP14.53□□□□□ -0.08
LINC00339-203ENST00000420503 ST18O60284 1047 aa14.53□□□□□ -0.08
LINC00339-203ENST00000420503 CXCL14O95715 111 aa14.53□□□□□ -0.08
LINC00339-203ENST00000420503 SRGAP2BP0DMP2 458 aa14.53□□□□□ -0.08
LINC00339-203ENST00000420503 MYBP10242 640 aa14.53□□□□□ -0.08
LINC00339-203ENST00000420503 HOXB8P17481 243 aaPredicted RBP14.53□□□□□ -0.08
LINC00339-203ENST00000420503 PPM1AP35813 382 aa14.53□□□□□ -0.08
LINC00339-203ENST00000420503 KRT17Q04695 432 aa14.53□□□□□ -0.08
LINC00339-203ENST00000420503 TSGA10IPQ3SY00 556 aa14.53□□□□□ -0.08
LINC00339-203ENST00000420503 TMC5Q6UXY8 1006 aa14.53□□□□□ -0.08
LINC00339-203ENST00000420503 SLC5A5Q92911 643 aa14.53□□□□□ -0.08
LINC00339-203ENST00000420503 CCDC136Q96JN2 1154 aa14.53□□□□□ -0.08
LINC00339-203ENST00000420503 FAM167AQ96KS9 214 aa14.53□□□□□ -0.08
LINC00339-203ENST00000420503 JAKMIP1Q96N16 626 aaKnown RBP14.53□□□□□ -0.08
LINC00339-203ENST00000420503 FDXACB1Q9BRP7 624 aaPredicted RBP14.53□□□□□ -0.08
LINC00339-203ENST00000420503 GLT8D2Q9H1C3 349 aa14.53□□□□□ -0.08
LINC00339-203ENST00000420503 NRDE2Q9H7Z3 1164 aa14.53□□□□□ -0.08
LINC00339-203ENST00000420503 SEPT9Q9UHD8 586 aaPredicted RBP14.53□□□□□ -0.08
LINC00339-203ENST00000420503 CEP131Q9UPN4 1083 aa14.53□□□□□ -0.08
LINC00339-203ENST00000420503 DMDP11532 3685 aa14.52□□□□□ -0.08
LINC00339-203ENST00000420503 HOXA2O43364 376 aa14.52□□□□□ -0.09
LINC00339-203ENST00000420503 SSBP05455 408 aaKnown RBP eCLIP14.52□□□□□ -0.09
LINC00339-203ENST00000420503 PHKA2P46019 1235 aa14.52□□□□□ -0.09
LINC00339-203ENST00000420503 SLC11A1P49279 550 aa14.52□□□□□ -0.09
LINC00339-203ENST00000420503 CCT2P78371 535 aaKnown RBP14.52□□□□□ -0.09
LINC00339-203ENST00000420503 TBC1D8BQ0IIM8 1120 aa14.52□□□□□ -0.09
LINC00339-203ENST00000420503 MTMR3Q13615 1198 aa14.52□□□□□ -0.09
LINC00339-203ENST00000420503 BMP2KLQ5H9B9 411 aa14.52□□□□□ -0.09
LINC00339-203ENST00000420503 PLA2G4FQ68DD2 849 aa14.52□□□□□ -0.09
LINC00339-203ENST00000420503 ZNF280BQ86YH2 543 aa14.52□□□□□ -0.09
LINC00339-203ENST00000420503 ZNF579Q8NAF0 562 aaKnown RBP14.52□□□□□ -0.09
LINC00339-203ENST00000420503 SLC22A17Q8WUG5 538 aa14.52□□□□□ -0.09
LINC00339-203ENST00000420503 LARP6Q9BRS8 491 aaKnown RBP14.52□□□□□ -0.09
LINC00339-203ENST00000420503 SLC26A6Q9BXS9 759 aa14.52□□□□□ -0.09
LINC00339-203ENST00000420503 GBP3Q9H0R5 595 aa14.52□□□□□ -0.09
LINC00339-203ENST00000420503 TBC1D13Q9NVG8 400 aa14.52□□□□□ -0.09
LINC00339-203ENST00000420503 SORCS3Q9UPU3 1222 aa14.52□□□□□ -0.09
LINC00339-203ENST00000420503 NID2Q14112 1375 aa14.51□□□□□ -0.09
LINC00339-203ENST00000420503 GALR2O43603 387 aaPredicted RBP14.51□□□□□ -0.09
LINC00339-203ENST00000420503 GAS7O60861 476 aa14.51□□□□□ -0.09
LINC00339-203ENST00000420503 PSMD10O75832 226 aa14.51□□□□□ -0.09
LINC00339-203ENST00000420503 TMOD1P28289 359 aa14.51□□□□□ -0.09
LINC00339-203ENST00000420503 FGD1P98174 961 aa14.51□□□□□ -0.09
LINC00339-203ENST00000420503 TPRNQ4KMQ1 711 aa14.51□□□□□ -0.09
LINC00339-203ENST00000420503 LRCH2Q5VUJ6 765 aa14.51□□□□□ -0.09
LINC00339-203ENST00000420503 CWF19L1Q69YN2 538 aaKnown RBP14.51□□□□□ -0.09
LINC00339-203ENST00000420503 TEX2Q8IWB9 1127 aa14.51□□□□□ -0.09
LINC00339-203ENST00000420503 TMEM169Q96HH4 297 aa14.51□□□□□ -0.09
LINC00339-203ENST00000420503 IGSF21Q96ID5 467 aa14.51□□□□□ -0.09
LINC00339-203ENST00000420503 AIFM3Q96NN9 605 aa14.51□□□□□ -0.09
LINC00339-203ENST00000420503 PRRX2Q99811 253 aa14.51□□□□□ -0.09
LINC00339-203ENST00000420503 BMP2KQ9NSY1 1161 aaPredicted RBP14.51□□□□□ -0.09
LINC00339-203ENST00000420503 PIN4Q9Y237 131 aaKnown RBP14.51□□□□□ -0.09
LINC00339-203ENST00000420503 SNX14Q9Y5W7 946 aa14.51□□□□□ -0.09
LINC00339-203ENST00000420503 FSD2A1L4K1 749 aa14.5□□□□□ -0.09
LINC00339-203ENST00000420503 PI15O43692 258 aa14.5□□□□□ -0.09
LINC00339-203ENST00000420503 DDHD2O94830 711 aa14.5□□□□□ -0.09
LINC00339-203ENST00000420503 GALTP07902 379 aa14.5□□□□□ -0.09
LINC00339-203ENST00000420503 ALDH7A1P49419 539 aaKnown RBP14.5□□□□□ -0.09
LINC00339-203ENST00000420503 RCAN1P53805 252 aa14.5□□□□□ -0.09
LINC00339-203ENST00000420503 ITIH3Q06033 890 aa14.5□□□□□ -0.09
LINC00339-203ENST00000420503 PTPN14Q15678 1187 aa14.5□□□□□ -0.09
LINC00339-203ENST00000420503 TWF2Q6IBS0 349 aaKnown RBP14.5□□□□□ -0.09
LINC00339-203ENST00000420503 KIAA1841Q6NSI8 718 aa14.5□□□□□ -0.09
LINC00339-203ENST00000420503 CES5AQ6NT32 575 aa14.5□□□□□ -0.09
LINC00339-203ENST00000420503 B3GNT9Q6UX72 402 aa14.5□□□□□ -0.09
LINC00339-203ENST00000420503 TDRD5Q8NAT2 981 aaKnown RBP14.5□□□□□ -0.09
LINC00339-203ENST00000420503 TBCKQ8TEA7 893 aa14.5□□□□□ -0.09
LINC00339-203ENST00000420503 NLRP4Q96MN2 994 aa14.5□□□□□ -0.09
LINC00339-203ENST00000420503 TEKT3Q9BXF9 490 aa14.5□□□□□ -0.09
LINC00339-203ENST00000420503 NRBP2Q9NSY0 501 aa14.5□□□□□ -0.09
LINC00339-203ENST00000420503 RNF216Q9NWF9 866 aaPredicted RBP14.5□□□□□ -0.09
LINC00339-203ENST00000420503 WRAP73Q9P2S5 460 aaPredicted RBP14.5□□□□□ -0.09
LINC00339-203ENST00000420503 DBR1Q9UK59 544 aaKnown RBP14.5□□□□□ -0.09
LINC00339-203ENST00000420503 NR2E1Q9Y466 385 aa14.5□□□□□ -0.09
LINC00339-203ENST00000420503 EP300Q09472 2414 aaPredicted RBP14.5□□□□□ -0.09
LINC00339-203ENST00000420503 DOCK6Q96HP0 2047 aa14.49□□□□□ -0.09
LINC00339-203ENST00000420503 DCHS1Q96JQ0 3298 aa14.49□□□□□ -0.09
LINC00339-203ENST00000420503 IGKV6-21A0A0C4DH24 114 aa14.49□□□□□ -0.09
LINC00339-203ENST00000420503 F8W810 466 aa14.49□□□□□ -0.09
LINC00339-203ENST00000420503 EML1O00423 815 aa14.49□□□□□ -0.09
LINC00339-203ENST00000420503 OFD1O75665 1012 aa14.49□□□□□ -0.09
LINC00339-203ENST00000420503 EOMESO95936 686 aa14.49□□□□□ -0.09
LINC00339-203ENST00000420503 CTSAP10619 480 aa14.49□□□□□ -0.09
LINC00339-203ENST00000420503 NPEPPSP55786 919 aa14.49□□□□□ -0.09
LINC00339-203ENST00000420503 NPY5RQ15761 445 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms