RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 LRIT3Q3SXY7 679 aa22.89■■□□□ 1.25
HMGXB4-203ENST00000420166 RRAGBQ5VZM2 374 aa22.89■■□□□ 1.25
HMGXB4-203ENST00000420166 RNF149Q8NC42 400 aa22.89■■□□□ 1.25
HMGXB4-203ENST00000420166 IFT122Q9HBG6 1241 aa22.89■■□□□ 1.25
HMGXB4-203ENST00000420166 A0A087X0B3 334 aa22.88■■□□□ 1.25
HMGXB4-203ENST00000420166 KCNJ6P48051 423 aa22.88■■□□□ 1.25
HMGXB4-203ENST00000420166 NFX1Q12986 1120 aaKnown RBP22.88■■□□□ 1.25
HMGXB4-203ENST00000420166 MCM6Q14566 821 aa22.88■■□□□ 1.25
HMGXB4-203ENST00000420166 CCDC73Q6ZRK6 1079 aa22.88■■□□□ 1.25
HMGXB4-203ENST00000420166 LARP4BQ92615 738 aaKnown RBP22.88■■□□□ 1.25
HMGXB4-203ENST00000420166 KIFAP3Q92845 792 aa22.88■■□□□ 1.25
HMGXB4-203ENST00000420166 TIPINQ9BVW5 301 aa22.88■■□□□ 1.25
HMGXB4-203ENST00000420166 INO80BQ9C086 356 aaPredicted RBP22.88■■□□□ 1.25
HMGXB4-203ENST00000420166 TMX1Q9H3N1 280 aa22.88■■□□□ 1.25
HMGXB4-203ENST00000420166 KCND2Q9NZV8 630 aa22.88■■□□□ 1.25
HMGXB4-203ENST00000420166 CHMP5Q9NZZ3 219 aa22.88■■□□□ 1.25
HMGXB4-203ENST00000420166 ST3GAL5Q9UNP4 418 aa22.88■■□□□ 1.25
HMGXB4-203ENST00000420166 HIP1RO75146 1068 aa22.87■■□□□ 1.25
HMGXB4-203ENST00000420166 CSDE1O75534 798 aaKnown RBP22.87■■□□□ 1.25
HMGXB4-203ENST00000420166 GUCY2CP25092 1073 aa22.87■■□□□ 1.25
HMGXB4-203ENST00000420166 PHKA2P46019 1235 aa22.87■■□□□ 1.25
HMGXB4-203ENST00000420166 POU5F1BQ06416 359 aa22.87■■□□□ 1.25
HMGXB4-203ENST00000420166 NAALADL2Q58DX5 795 aa22.87■■□□□ 1.25
HMGXB4-203ENST00000420166 FAM43BQ6ZT52 329 aaPredicted RBP22.87■■□□□ 1.25
HMGXB4-203ENST00000420166 SRGAP1Q7Z6B7 1085 aa22.87■■□□□ 1.25
HMGXB4-203ENST00000420166 SLC9A7Q96T83 725 aa22.87■■□□□ 1.25
HMGXB4-203ENST00000420166 FTHL17Q9BXU8 183 aa22.87■■□□□ 1.25
HMGXB4-203ENST00000420166 GBF1Q92538 1859 aa22.87■■□□□ 1.25
HMGXB4-203ENST00000420166 TTC3P53804 2025 aa22.87■■□□□ 1.25
HMGXB4-203ENST00000420166 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.86■■□□□ 1.25
HMGXB4-203ENST00000420166 FGFR4P22455 802 aa22.86■■□□□ 1.25
HMGXB4-203ENST00000420166 STAT6P42226 847 aa22.86■■□□□ 1.25
HMGXB4-203ENST00000420166 PTENP60484 403 aa22.86■■□□□ 1.25
HMGXB4-203ENST00000420166 DEFB103AP81534 67 aa22.86■■□□□ 1.25
HMGXB4-203ENST00000420166 MAPK7Q13164 816 aa22.86■■□□□ 1.25
HMGXB4-203ENST00000420166 DHX8Q14562 1220 aaKnown RBP22.86■■□□□ 1.25
HMGXB4-203ENST00000420166 RESP18Q5W5W9 173 aa22.86■■□□□ 1.25
HMGXB4-203ENST00000420166 FAM109BQ6ICB4 259 aaPredicted RBP22.86■■□□□ 1.25
HMGXB4-203ENST00000420166 GPBP1Q86WP2 473 aa22.86■■□□□ 1.25
HMGXB4-203ENST00000420166 IFNLR1Q8IU57 520 aaPredicted RBP22.86■■□□□ 1.25
HMGXB4-203ENST00000420166 PDILTQ8N807 584 aa22.86■■□□□ 1.25
HMGXB4-203ENST00000420166 LINC01599Q8WXQ3 324 aa22.86■■□□□ 1.25
HMGXB4-203ENST00000420166 BSNDQ8WZ55 320 aa22.86■■□□□ 1.25
HMGXB4-203ENST00000420166 PANK2Q9BZ23 570 aa22.86■■□□□ 1.25
HMGXB4-203ENST00000420166 POLD4Q9HCU8 107 aa22.86■■□□□ 1.25
HMGXB4-203ENST00000420166 LRRIQ4A6NIV6 560 aa22.85■■□□□ 1.25
HMGXB4-203ENST00000420166 ATP2A2P16615 1042 aaKnown RBP22.85■■□□□ 1.25
HMGXB4-203ENST00000420166 SFPQP23246 707 aaKnown RBP eCLIP22.85■■□□□ 1.25
HMGXB4-203ENST00000420166 PPP2R5AQ15172 486 aa22.85■■□□□ 1.25
HMGXB4-203ENST00000420166 ARSHQ5FYA8 562 aa22.85■■□□□ 1.25
HMGXB4-203ENST00000420166 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.85■■□□□ 1.25
HMGXB4-203ENST00000420166 DAW1Q8N136 415 aa22.85■■□□□ 1.25
HMGXB4-203ENST00000420166 PHOSPHO2Q8TCD6 241 aa22.85■■□□□ 1.25
HMGXB4-203ENST00000420166 DRC1Q96MC2 740 aa22.85■■□□□ 1.25
HMGXB4-203ENST00000420166 IPO9Q96P70 1041 aaKnown RBP22.85■■□□□ 1.25
HMGXB4-203ENST00000420166 NFKBIZQ9BYH8 718 aa22.85■■□□□ 1.25
HMGXB4-203ENST00000420166 MINDY3Q9H8M7 445 aa22.85■■□□□ 1.25
HMGXB4-203ENST00000420166 GDPD2Q9HCC8 539 aa22.85■■□□□ 1.25
HMGXB4-203ENST00000420166 FAM13BQ9NYF5 915 aa22.85■■□□□ 1.25
HMGXB4-203ENST00000420166 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.84■■□□□ 1.25
HMGXB4-203ENST00000420166 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.84■■□□□ 1.25
HMGXB4-203ENST00000420166 MGEA5O60502 916 aa22.84■■□□□ 1.25
HMGXB4-203ENST00000420166 AMHP03971 560 aa22.84■■□□□ 1.25
HMGXB4-203ENST00000420166 NAMPTP43490 491 aa22.84■■□□□ 1.25
HMGXB4-203ENST00000420166 RAD51AP2Q09MP3 1159 aa22.84■■□□□ 1.25
HMGXB4-203ENST00000420166 ADALQ6DHV7 355 aa22.84■■□□□ 1.25
HMGXB4-203ENST00000420166 IFT74Q96LB3 600 aa22.84■■□□□ 1.25
HMGXB4-203ENST00000420166 TSPYL2Q9H2G4 693 aaPredicted RBP22.84■■□□□ 1.25
HMGXB4-203ENST00000420166 NPHP3-ACAD11A0A0J9YXS1 232 aa22.83■■□□□ 1.25
HMGXB4-203ENST00000420166 GRXCR1A8MXD5 290 aa22.83■■□□□ 1.25
HMGXB4-203ENST00000420166 ENPP3O14638 875 aa22.83■■□□□ 1.25
HMGXB4-203ENST00000420166 SMAD3P84022 425 aaKnown RBP22.83■■□□□ 1.25
HMGXB4-203ENST00000420166 DSC3Q14574 896 aa22.83■■□□□ 1.25
HMGXB4-203ENST00000420166 E2F4Q16254 413 aa22.83■■□□□ 1.25
HMGXB4-203ENST00000420166 CDCA2Q69YH5 1023 aaPredicted RBP22.83■■□□□ 1.25
HMGXB4-203ENST00000420166 CATSPER4Q7RTX7 472 aa22.83■■□□□ 1.25
HMGXB4-203ENST00000420166 RTN4RL1Q86UN2 441 aaPredicted RBP22.83■■□□□ 1.25
HMGXB4-203ENST00000420166 MYOCDQ8IZQ8 938 aa22.83■■□□□ 1.25
HMGXB4-203ENST00000420166 LAMA2P24043 3122 aaKnown RBP22.83■■□□□ 1.24
HMGXB4-203ENST00000420166 DENND3A2RUS2 1198 aa22.82■■□□□ 1.24
HMGXB4-203ENST00000420166 SOX1O00570 391 aaPredicted RBP22.82■■□□□ 1.24
HMGXB4-203ENST00000420166 CMA1P23946 247 aa22.82■■□□□ 1.24
HMGXB4-203ENST00000420166 MBTD1Q05BQ5 628 aa22.82■■□□□ 1.24
HMGXB4-203ENST00000420166 SV2BQ7L1I2 683 aa22.82■■□□□ 1.24
HMGXB4-203ENST00000420166 HERC6Q8IVU3 1022 aa22.82■■□□□ 1.24
HMGXB4-203ENST00000420166 ZBTB8OSQ8IWT0 167 aa22.82■■□□□ 1.24
HMGXB4-203ENST00000420166 DEPTORQ8TB45 409 aa22.82■■□□□ 1.24
HMGXB4-203ENST00000420166 DHX58Q96C10 678 aa22.82■■□□□ 1.24
HMGXB4-203ENST00000420166 ADAM2Q99965 735 aa22.82■■□□□ 1.24
HMGXB4-203ENST00000420166 REEP2Q9BRK0 252 aa22.82■■□□□ 1.24
HMGXB4-203ENST00000420166 C17orf75Q9HAS0 396 aa22.82■■□□□ 1.24
HMGXB4-203ENST00000420166 ODF2LQ9ULJ1 636 aa22.82■■□□□ 1.24
HMGXB4-203ENST00000420166 INO80B-WBP1J3KQ70 363 aa22.81■■□□□ 1.24
HMGXB4-203ENST00000420166 CACNB1Q02641 598 aaPredicted RBP22.81■■□□□ 1.24
HMGXB4-203ENST00000420166 PCBP1Q15365 356 aaKnown RBP eCLIP22.81■■□□□ 1.24
HMGXB4-203ENST00000420166 TMCO2Q7Z6W1 182 aaPredicted RBP22.81■■□□□ 1.24
HMGXB4-203ENST00000420166 IQUBQ8NA54 791 aa22.81■■□□□ 1.24
HMGXB4-203ENST00000420166 C2orf40Q9H1Z8 148 aa22.81■■□□□ 1.24
HMGXB4-203ENST00000420166 CUEDC2Q9H467 287 aa22.81■■□□□ 1.24
HMGXB4-203ENST00000420166 C1orf112Q9NSG2 853 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms