RNA–Protein interactions for RNA: ENST00000418646.5

GPCPD1-202, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 4,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-202ENST00000418646 FOSP01100 380 aaPredicted RBP4.87□□□□□ -1.63
GPCPD1-202ENST00000418646 AFPP02771 609 aaKnown RBP4.87□□□□□ -1.63
GPCPD1-202ENST00000418646 GOLGA8HP0CJ92 632 aa4.87□□□□□ -1.63
GPCPD1-202ENST00000418646 KCNA1Q09470 495 aa4.87□□□□□ -1.63
GPCPD1-202ENST00000418646 NFIAQ12857 509 aa4.87□□□□□ -1.63
GPCPD1-202ENST00000418646 CLUL1Q15846 466 aa4.87□□□□□ -1.63
GPCPD1-202ENST00000418646 KIAA0753Q2KHM9 967 aa4.87□□□□□ -1.63
GPCPD1-202ENST00000418646 MMS22LQ6ZRQ5 1243 aa4.87□□□□□ -1.63
GPCPD1-202ENST00000418646 HEATR3Q7Z4Q2 680 aa4.87□□□□□ -1.63
GPCPD1-202ENST00000418646 COL23A1Q86Y22 540 aaPredicted RBP4.87□□□□□ -1.63
GPCPD1-202ENST00000418646 CCDC82Q8N4S0 544 aa4.87□□□□□ -1.63
GPCPD1-202ENST00000418646 SH3TC2Q8TF17 1288 aa4.87□□□□□ -1.63
GPCPD1-202ENST00000418646 DHX38Q92620 1227 aaKnown RBP4.87□□□□□ -1.63
GPCPD1-202ENST00000418646 COA7Q96BR5 231 aa4.87□□□□□ -1.63
GPCPD1-202ENST00000418646 ARHGEF26Q96DR7 871 aa4.87□□□□□ -1.63
GPCPD1-202ENST00000418646 IFT43Q96FT9 208 aa4.87□□□□□ -1.63
GPCPD1-202ENST00000418646 SSU72Q9NP77 194 aaKnown RBP4.87□□□□□ -1.63
GPCPD1-202ENST00000418646 RNF216Q9NWF9 866 aaPredicted RBP4.87□□□□□ -1.63
GPCPD1-202ENST00000418646 HDAC9Q9UKV0 1011 aa4.87□□□□□ -1.63
GPCPD1-202ENST00000418646 PPP1R9AQ9ULJ8 1098 aa4.87□□□□□ -1.63
GPCPD1-202ENST00000418646 ZMYND8Q9ULU4 1186 aaPredicted RBP4.87□□□□□ -1.63
GPCPD1-202ENST00000418646 MAPK8IP1Q9UQF2 711 aa4.87□□□□□ -1.63
GPCPD1-202ENST00000418646 MROH7Q68CQ1 1323 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 WFS1O76024 890 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 ABHD2P08910 425 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 TRIM21P19474 475 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 ACO1P21399 889 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 GTF2H1P32780 548 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 MAN1A1P33908 653 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 FMO5P49326 533 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 CASP4P49662 377 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 PAK2Q13177 524 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 GPS2Q13227 327 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 CTC1Q2NKJ3 1217 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 SLF2Q8IX21 1173 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 IFT20Q8IY31 132 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 EPS8L1Q8TE68 723 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 CALML4Q96GE6 196 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 CCDC42Q96M95 316 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 PCDHB18PQ96TA0 734 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 RIT2Q99578 217 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 HERPUD2Q9BSE4 406 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 AVENQ9NQS1 362 aaPredicted RBP4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 AGPAT3Q9NRZ7 376 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 BIN2Q9UBW5 565 aaPredicted RBP4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 ABCF2Q9UG63 623 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 NPHP3-ACAD11A0A0J9YXS1 232 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 SIGLEC16A6NMB1 481 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 YDJCA8MPS7 323 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 ATP2A1O14983 1001 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 NPHP1O15259 732 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 CAPNS1P04632 268 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 SCP2P22307 547 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 ASIC1P78348 528 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 MGAT5Q09328 741 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 MOGSQ13724 837 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 ZRSR1Q15695 479 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 LETM2Q2VYF4 491 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 FKBP15Q5T1M5 1219 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 MAPKAPK5Q8IW41 473 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 ANKRD20A12PQ8NF67 263 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 FAM76AQ8TAV0 307 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 SNX29Q8TEQ0 813 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 CYFIP2Q96F07 1278 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 ACSBG1Q96GR2 724 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 GJD4Q96KN9 370 aaPredicted RBP4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 KREMEN1Q96MU8 473 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 WDR83Q9BRX9 315 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 PABPC3Q9H361 631 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 APEX2Q9UBZ4 518 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 RTCBQ9Y3I0 505 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 GOLGB1Q14789 3259 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 CITO14578 2027 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 ANKRD62A6NC57 917 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 GOLGA6CA6NDK9 693 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 OPA1O60313 960 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 EVI5O60447 810 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 HEXIM1O94992 359 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 NR3C1P04150 777 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 GOLGA6DP0CG33 693 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 ITGA4P13612 1032 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 KCNA3P22001 575 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 HNRNPH1P31943 449 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 EIF3BP55884 814 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 FMO1Q01740 532 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 RASSF7Q02833 373 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 ALCAMQ13740 583 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 GNL2Q13823 731 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 PPP2R5EQ16537 467 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 DNAJC21Q5F1R6 531 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 ARTNQ5T4W7 220 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 TMEM179Q6ZVK1 233 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 SMIM5Q71RC9 77 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 RRAGAQ7L523 313 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 PODNQ7Z5L7 613 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 NLRP14Q86W24 1093 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 NBPF5PQ86XG9 351 aaPredicted RBP4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 RBM17Q96I25 401 aaKnown RBP4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 TEPSINQ96N21 525 aa4.86□□□□□ -1.63
GPCPD1-202ENST00000418646 MTFR1LQ9H019 292 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms