RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 POLR3FQ9H1D9 316 aaPredicted RBP20.72■□□□□ 0.91
PTCD3-204ENST00000418628 GPRC5CQ9NQ84 441 aa20.72■□□□□ 0.91
PTCD3-204ENST00000418628 ST3GAL5Q9UNP4 418 aa20.72■□□□□ 0.91
PTCD3-204ENST00000418628 GPR182O15218 404 aa20.71■□□□□ 0.91
PTCD3-204ENST00000418628 MGEA5O60502 916 aa20.71■□□□□ 0.91
PTCD3-204ENST00000418628 KCNJ6P48051 423 aa20.71■□□□□ 0.91
PTCD3-204ENST00000418628 MAPK7Q13164 816 aa20.71■□□□□ 0.91
PTCD3-204ENST00000418628 SPECC1Q5M775 1068 aa20.71■□□□□ 0.91
PTCD3-204ENST00000418628 ODR4Q5SWX8 454 aa20.71■□□□□ 0.91
PTCD3-204ENST00000418628 RINT1Q6NUQ1 792 aa20.71■□□□□ 0.91
PTCD3-204ENST00000418628 C1orf186Q6ZWK4 172 aa20.71■□□□□ 0.91
PTCD3-204ENST00000418628 HERC6Q8IVU3 1022 aa20.71■□□□□ 0.91
PTCD3-204ENST00000418628 DAW1Q8N136 415 aa20.71■□□□□ 0.91
PTCD3-204ENST00000418628 SYT2Q8N9I0 419 aaPredicted RBP20.71■□□□□ 0.91
PTCD3-204ENST00000418628 KCNG4Q8TDN1 519 aa20.71■□□□□ 0.91
PTCD3-204ENST00000418628 BSNDQ8WZ55 320 aa20.71■□□□□ 0.91
PTCD3-204ENST00000418628 NLRP4Q96MN2 994 aa20.71■□□□□ 0.91
PTCD3-204ENST00000418628 RUSC1Q9BVN2 902 aa20.71■□□□□ 0.91
PTCD3-204ENST00000418628 PBX4Q9BYU1 374 aa20.71■□□□□ 0.91
PTCD3-204ENST00000418628 GCOM2Q9BZD3 368 aaPredicted RBP20.71■□□□□ 0.91
PTCD3-204ENST00000418628 MINDY3Q9H8M7 445 aa20.71■□□□□ 0.91
PTCD3-204ENST00000418628 RC3H2Q9HBD1 1191 aaKnown RBP20.71■□□□□ 0.91
PTCD3-204ENST00000418628 RCOR1Q9UKL0 485 aa20.71■□□□□ 0.91
PTCD3-204ENST00000418628 CFAP45Q9UL16 551 aa20.71■□□□□ 0.91
PTCD3-204ENST00000418628 GJB5O95377 273 aa20.7■□□□□ 0.9
PTCD3-204ENST00000418628 PTENP60484 403 aa20.7■□□□□ 0.9
PTCD3-204ENST00000418628 FOXD4L6Q3SYB3 417 aaPredicted RBP20.7■□□□□ 0.9
PTCD3-204ENST00000418628 NAALADL2Q58DX5 795 aa20.7■□□□□ 0.9
PTCD3-204ENST00000418628 CDCA2Q69YH5 1023 aaPredicted RBP20.7■□□□□ 0.9
PTCD3-204ENST00000418628 FOXD4L3Q6VB84 417 aaPredicted RBP20.7■□□□□ 0.9
PTCD3-204ENST00000418628 SRGAP1Q7Z6B7 1085 aa20.7■□□□□ 0.9
PTCD3-204ENST00000418628 RNF149Q8NC42 400 aa20.7■□□□□ 0.9
PTCD3-204ENST00000418628 CALML4Q96GE6 196 aa20.7■□□□□ 0.9
PTCD3-204ENST00000418628 CHAMP1Q96JM3 812 aa20.7■□□□□ 0.9
PTCD3-204ENST00000418628 KCND2Q9NZV8 630 aa20.7■□□□□ 0.9
PTCD3-204ENST00000418628 A0A087X0B3 334 aa20.69■□□□□ 0.9
PTCD3-204ENST00000418628 ENPP3O14638 875 aa20.69■□□□□ 0.9
PTCD3-204ENST00000418628 CUTAO60888 179 aa20.69■□□□□ 0.9
PTCD3-204ENST00000418628 GUCY2CP25092 1073 aa20.69■□□□□ 0.9
PTCD3-204ENST00000418628 PBX2P40425 430 aa20.69■□□□□ 0.9
PTCD3-204ENST00000418628 NUCB2P80303 420 aa20.69■□□□□ 0.9
PTCD3-204ENST00000418628 RAD54LQ92698 747 aa20.69■□□□□ 0.9
PTCD3-204ENST00000418628 TOP1MTQ969P6 601 aa20.69■□□□□ 0.9
PTCD3-204ENST00000418628 CDK5RAP3Q96JB5 506 aa20.69■□□□□ 0.9
PTCD3-204ENST00000418628 PLIN2Q99541 437 aa20.69■□□□□ 0.9
PTCD3-204ENST00000418628 INO80BQ9C086 356 aaPredicted RBP20.69■□□□□ 0.9
PTCD3-204ENST00000418628 YBX2Q9Y2T7 364 aaKnown RBP20.69■□□□□ 0.9
PTCD3-204ENST00000418628 PCDHA11Q9Y5I1 949 aa20.69■□□□□ 0.9
PTCD3-204ENST00000418628 TMEM265A0A087WTH1 108 aa20.68■□□□□ 0.9
PTCD3-204ENST00000418628 CSDE1O75534 798 aaKnown RBP20.68■□□□□ 0.9
PTCD3-204ENST00000418628 AMHP03971 560 aa20.68■□□□□ 0.9
PTCD3-204ENST00000418628 PLA2G4BP0C869 781 aa20.68■□□□□ 0.9
PTCD3-204ENST00000418628 SFPQP23246 707 aaKnown RBP eCLIP20.68■□□□□ 0.9
PTCD3-204ENST00000418628 DNAJB2P25686 324 aa20.68■□□□□ 0.9
PTCD3-204ENST00000418628 HTRA4P83105 476 aaPredicted RBP20.68■□□□□ 0.9
PTCD3-204ENST00000418628 ZRSR1Q15695 479 aaKnown RBP20.68■□□□□ 0.9
PTCD3-204ENST00000418628 SHC4Q6S5L8 630 aa20.68■□□□□ 0.9
PTCD3-204ENST00000418628 TMCO2Q7Z6W1 182 aaPredicted RBP20.68■□□□□ 0.9
PTCD3-204ENST00000418628 SCLT1Q96NL6 688 aa20.68■□□□□ 0.9
PTCD3-204ENST00000418628 TIPINQ9BVW5 301 aa20.68■□□□□ 0.9
PTCD3-204ENST00000418628 RGS18Q9NS28 235 aa20.68■□□□□ 0.9
PTCD3-204ENST00000418628 STK17AQ9UEE5 414 aa20.68■□□□□ 0.9
PTCD3-204ENST00000418628 DAXXQ9UER7 740 aaPredicted RBP20.68■□□□□ 0.9
PTCD3-204ENST00000418628 PCDHA7Q9UN72 937 aa20.68■□□□□ 0.9
PTCD3-204ENST00000418628 ATP6V1DQ9Y5K8 247 aa20.68■□□□□ 0.9
PTCD3-204ENST00000418628 PLXNA4Q9HCM2 1894 aa20.68■□□□□ 0.9
PTCD3-204ENST00000418628 ANK1P16157 1881 aa20.67■□□□□ 0.9
PTCD3-204ENST00000418628 C9IYK1 514 aa20.67■□□□□ 0.9
PTCD3-204ENST00000418628 FGFR4P22455 802 aa20.67■□□□□ 0.9
PTCD3-204ENST00000418628 PHKA2P46019 1235 aa20.67■□□□□ 0.9
PTCD3-204ENST00000418628 KRT85P78386 507 aa20.67■□□□□ 0.9
PTCD3-204ENST00000418628 MBTD1Q05BQ5 628 aa20.67■□□□□ 0.9
PTCD3-204ENST00000418628 NFX1Q12986 1120 aaKnown RBP20.67■□□□□ 0.9
PTCD3-204ENST00000418628 TFDP1Q14186 410 aa20.67■□□□□ 0.9
PTCD3-204ENST00000418628 PCBP1Q15365 356 aaKnown RBP eCLIP20.67■□□□□ 0.9
PTCD3-204ENST00000418628 RAB30Q15771 203 aa20.67■□□□□ 0.9
PTCD3-204ENST00000418628 AMHR2Q16671 573 aa20.67■□□□□ 0.9
PTCD3-204ENST00000418628 ARSHQ5FYA8 562 aa20.67■□□□□ 0.9
PTCD3-204ENST00000418628 MYOCDQ8IZQ8 938 aa20.67■□□□□ 0.9
PTCD3-204ENST00000418628 SP7Q8TDD2 431 aaPredicted RBP20.67■□□□□ 0.9
PTCD3-204ENST00000418628 LEO1Q8WVC0 666 aaPredicted RBP20.67■□□□□ 0.9
PTCD3-204ENST00000418628 LARP4BQ92615 738 aaKnown RBP20.67■□□□□ 0.9
PTCD3-204ENST00000418628 KIFAP3Q92845 792 aa20.67■□□□□ 0.9
PTCD3-204ENST00000418628 TRAIPQ9BWF2 469 aa20.67■□□□□ 0.9
PTCD3-204ENST00000418628 AGPAT5Q9NUQ2 364 aa20.67■□□□□ 0.9
PTCD3-204ENST00000418628 CIZ1Q9ULV3 898 aaPredicted RBP20.67■□□□□ 0.9
PTCD3-204ENST00000418628 ADGRA3Q8IWK6 1321 aa20.67■□□□□ 0.9
PTCD3-204ENST00000418628 SRGAP2CP0DJJ0 459 aa20.66■□□□□ 0.9
PTCD3-204ENST00000418628 ANP32AP39687 249 aaKnown RBP20.66■□□□□ 0.9
PTCD3-204ENST00000418628 NAMPTP43490 491 aa20.66■□□□□ 0.9
PTCD3-204ENST00000418628 RABGGTBP53611 331 aa20.66■□□□□ 0.9
PTCD3-204ENST00000418628 E2F4Q16254 413 aa20.66■□□□□ 0.9
PTCD3-204ENST00000418628 FAM102BQ5T8I3 360 aa20.66■□□□□ 0.9
PTCD3-204ENST00000418628 MAEAQ7L5Y9 396 aa20.66■□□□□ 0.9
PTCD3-204ENST00000418628 CCDC113Q9H0I3 377 aa20.66■□□□□ 0.9
PTCD3-204ENST00000418628 C1orf112Q9NSG2 853 aa20.66■□□□□ 0.9
PTCD3-204ENST00000418628 CCDC39Q9UFE4 941 aa20.66■□□□□ 0.9
PTCD3-204ENST00000418628 HIP1RO75146 1068 aa20.65■□□□□ 0.9
PTCD3-204ENST00000418628 TXLNAP40222 546 aa20.65■□□□□ 0.9
PTCD3-204ENST00000418628 SARSP49591 514 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms