RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 DMAP1Q9NPF5 467 aaPredicted RBP8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 ATP8A2Q9NTI2 1148 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 MTRF1LQ9UGC7 380 aaKnown RBP8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 RASAL2Q9UJF2 1139 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 AMFRQ9UKV5 643 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 INTUQ9ULD6 942 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 RPL26L1Q9UNX3 145 aaKnown RBP8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 PCDH11XQ9BZA7 1347 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 CYP2D7A0A087X1C5 515 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 TRAF5O00463 557 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 HGSO14964 777 aaPredicted RBP8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 NVLO15381 856 aaKnown RBP8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 RARGP13631 454 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 SLC5A1P13866 664 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 FGFR4P22455 802 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 GALNT17Q6IS24 598 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 DYMQ7RTS9 669 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 ADGRA1Q86SQ6 560 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 SUPT20HQ8NEM7 779 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 ARHGEF2Q92974 986 aaKnown RBP8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 TGS1Q96RS0 853 aaKnown RBP8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 CARD9Q9H257 536 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 USP40Q9NVE5 1235 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 PARP2Q9UGN5 583 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 SEC63Q9UGP8 760 aaKnown RBP8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 SMAPO00193 183 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 GNA14O95837 355 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 H2AFZP0C0S5 128 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 PRKCIP41743 596 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 MAGEA8P43361 318 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 LRRC41Q15345 812 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 SOGA3Q5TF21 947 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 HHATQ5VTY9 493 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 H2AFVQ71UI9 128 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 INTS8Q75QN2 995 aaKnown RBP8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 MYOCDQ8IZQ8 938 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 TIPINQ9BVW5 301 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 FAM192AQ9GZU8 254 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 MYLK2Q9H1R3 596 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 DCLRE1BQ9H816 532 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 NMRK1Q9NWW6 199 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 USP20Q9Y2K6 914 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 MROH5Q6ZUA9 1318 aa8.65□□□□□ -1.03
HMGXB4-202ENST00000418170 DDX3YO15523 660 aaKnown RBP8.65□□□□□ -1.03
HMGXB4-202ENST00000418170 NMT2O60551 498 aa8.65□□□□□ -1.03
HMGXB4-202ENST00000418170 LMNAP02545 664 aaKnown RBP8.65□□□□□ -1.03
HMGXB4-202ENST00000418170 CREB1P16220 341 aa8.65□□□□□ -1.03
HMGXB4-202ENST00000418170 RASA1P20936 1047 aa8.65□□□□□ -1.03
HMGXB4-202ENST00000418170 COPB2P35606 906 aa8.65□□□□□ -1.03
HMGXB4-202ENST00000418170 TECP42680 631 aa8.65□□□□□ -1.03
HMGXB4-202ENST00000418170 USP4Q13107 963 aa8.65□□□□□ -1.03
HMGXB4-202ENST00000418170 GRB10Q13322 594 aa8.65□□□□□ -1.03
HMGXB4-202ENST00000418170 NKX1-1Q15270 411 aaPredicted RBP8.65□□□□□ -1.03
HMGXB4-202ENST00000418170 HELBQ8NG08 1087 aaPredicted RBP8.65□□□□□ -1.03
HMGXB4-202ENST00000418170 LARP4BQ92615 738 aaKnown RBP8.65□□□□□ -1.03
HMGXB4-202ENST00000418170 RUNDC3BQ96NL0 473 aa8.65□□□□□ -1.03
HMGXB4-202ENST00000418170 LRP2BPQ9P2M1 347 aa8.65□□□□□ -1.03
HMGXB4-202ENST00000418170 H0Y3Z8 333 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 ZSCAN9O15535 394 aaPredicted RBP8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 CREB3O43889 395 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 CYP7A1P22680 504 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 PTGIRP43119 386 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 RPL21P46778 160 aaKnown RBP8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 PABPC1LQ4VXU2 614 aaKnown RBP8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 OTUD6AQ7L8S5 288 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 VSIG1Q86XK7 387 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 MAGEB18Q96M61 343 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 SERPINB12Q96P63 405 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 TBC1D10AQ9BXI6 508 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 ZWILCHQ9H900 591 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 STOML1Q9UBI4 398 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 PHF24Q9UPV7 400 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 PFASO15067 1338 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 MAGEB6P1A0A0J9YX57 407 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 ECE2O60344 883 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 GH1P01241 217 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 ATP5DP30049 168 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 VHLP40337 213 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 POLGP54098 1239 aaPredicted RBP8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 YARSP54577 528 aaKnown RBP8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 SETDB1Q15047 1291 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 CLUL1Q15846 466 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 DPY19L2P1Q6NXN4 242 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 FBXO41Q8TF61 875 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 AZIN2Q96A70 460 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 CRAMP1Q96RY5 1269 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 KANSL2Q9H9L4 492 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 MLXIPLQ9NP71 852 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 G3BP2Q9UN86 482 aaKnown RBP8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 PITPNM2Q9BZ72 1349 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 ATF3P18847 181 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 TARSP26639 723 aaKnown RBP8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 OCRLQ01968 901 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 PRPF4BQ13523 1007 aaKnown RBP8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 ZNF568Q3ZCX4 644 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 ADAT2Q7Z6V5 191 aaKnown RBP8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 ANKRD42Q8N9B4 389 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 TTC8Q8TAM2 541 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 GDAP1Q8TB36 358 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms