RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 NFASCO94856 1347 aa8.22□□□□□ -1.09
CASP4-202ENST00000417440 MEIS1O00470 390 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 ZBTB43O43298 467 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 ATG7O95352 703 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 FOSP01100 380 aaPredicted RBP8.21□□□□□ -1.1
CASP4-202ENST00000417440 ATP4AP20648 1035 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 SLC26A2P50443 739 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 RTN1Q16799 776 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 PTPRNQ16849 979 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 ZNF484Q5JVG2 852 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 ODR4Q5SWX8 454 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 APOA5Q6Q788 366 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 ABHD15Q6UXT9 468 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 CCDC60Q8IWA6 550 aaPredicted RBP8.21□□□□□ -1.1
CASP4-202ENST00000417440 ABI1Q8IZP0 508 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 ATP8B4Q8TF62 1192 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 TCF25Q9BQ70 676 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 ESYT1Q9BSJ8 1104 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 ZNF577Q9BSK1 485 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 PRM3Q9NNZ6 103 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 ENTPD7Q9NQZ7 604 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 C1orf112Q9NSG2 853 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 RBM28Q9NW13 759 aaKnown RBP8.21□□□□□ -1.1
CASP4-202ENST00000417440 PUF60Q9UHX1 559 aaKnown RBP8.21□□□□□ -1.1
CASP4-202ENST00000417440 BRPF3Q9ULD4 1205 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 SAMM50Q9Y512 469 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 BRWD1Q9NSI6 2320 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 CNTNAP5Q8WYK1 1306 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 KDM3AQ9Y4C1 1321 aa8.21□□□□□ -1.1
CASP4-202ENST00000417440 NLRC5Q86WI3 1866 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 IGKV6D-21A0A0A0MT36 114 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 KLF18A0A0U1RQI7 1052 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 GOLGA8AA7E2F4 631 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 GOLGA8BA8MQT2 603 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 HIDE1A8MVS5 230 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 C9IYK1 514 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 FAM86B1E9PN63 330 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 FAM86B2P0C5J1 330 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 SRGAP2BP0DMP2 458 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 LAG3P18627 525 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 FGFR4P22455 802 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 SREBF1P36956 1147 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 CLCN3P51790 818 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 CRYBB1P53674 252 aaPredicted RBP8.2□□□□□ -1.1
CASP4-202ENST00000417440 VCPP55072 806 aaKnown RBP8.2□□□□□ -1.1
CASP4-202ENST00000417440 FGD1P98174 961 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 KCNC4Q03721 635 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 UBE3AQ05086 875 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 CBX2Q14781 532 aaPredicted RBP8.2□□□□□ -1.1
CASP4-202ENST00000417440 NECTIN1Q15223 517 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 ANKRD54Q6NXT1 300 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 LRRC55Q6ZSA7 311 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 TMC7Q7Z402 723 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 BMP8AQ7Z5Y6 402 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 FAM228AQ86W67 206 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 FBXL6Q8N531 539 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 MRPS27Q92552 414 aaKnown RBP8.2□□□□□ -1.1
CASP4-202ENST00000417440 POM121Q96HA1 1249 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 SCLT1Q96NL6 688 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 CDCA3Q99618 268 aaPredicted RBP8.2□□□□□ -1.1
CASP4-202ENST00000417440 CWH43Q9H720 699 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 BARHL2Q9NY43 387 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 GABBR1Q9UBS5 961 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 CDH22Q9UJ99 828 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 AKT3Q9Y243 479 aa8.2□□□□□ -1.1
CASP4-202ENST00000417440 RALGAPA2Q2PPJ7 1873 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 ZBTB42B2RXF5 422 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 NT5C1B-RDH14C9J2C7 533 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 IPO5O00410 1097 aaKnown RBP8.19□□□□□ -1.1
CASP4-202ENST00000417440 FSCN2O14926 492 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 ADAMTS3O15072 1205 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 GPR32O75388 356 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 C22orf31O95567 290 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 PDGFBP01127 241 aaPredicted RBP8.19□□□□□ -1.1
CASP4-202ENST00000417440 PSAPP07602 524 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 WEE2P0C1S8 567 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 ZSCAN20P17040 1043 aaPredicted RBP8.19□□□□□ -1.1
CASP4-202ENST00000417440 CDC27P30260 824 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 ADD1P35611 737 aaKnown RBP8.19□□□□□ -1.1
CASP4-202ENST00000417440 METAP2P50579 478 aaKnown RBP eCLIP8.19□□□□□ -1.1
CASP4-202ENST00000417440 NLRP11P59045 1033 aaKnown RBP8.19□□□□□ -1.1
CASP4-202ENST00000417440 KRT17Q04695 432 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 SIGLEC14Q08ET2 396 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 TCF15Q12870 199 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 AP3B2Q13367 1082 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 PTPN21Q16825 1174 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 LONRF3Q496Y0 759 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 PRR16Q569H4 304 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 RNF20Q5VTR2 975 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 PDE12Q6L8Q7 609 aaKnown RBP8.19□□□□□ -1.1
CASP4-202ENST00000417440 EFCAB12Q6NXP0 572 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 PPP1R18Q6NYC8 613 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 SYCE2Q6PIF2 218 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 KCNT2Q6UVM3 1135 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 SGMS1Q86VZ5 419 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 SKAP1Q86WV1 359 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 LRRC71Q8N4P6 559 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 ATOH1Q92858 354 aaPredicted RBP8.19□□□□□ -1.1
CASP4-202ENST00000417440 ZNF558Q96NG5 402 aa8.19□□□□□ -1.1
CASP4-202ENST00000417440 CASD1Q96PB1 797 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms