RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 LRRC43Q8N309 656 aa28.36■■■□□ 2.13
VEGFA-208ENST00000417285 CEP170P1Q96L14 293 aa28.36■■■□□ 2.13
VEGFA-208ENST00000417285 TLE6Q9H808 572 aa28.36■■■□□ 2.13
VEGFA-208ENST00000417285 RNF19AQ9NV58 838 aa28.36■■■□□ 2.13
VEGFA-208ENST00000417285 CD207Q9UJ71 328 aa28.36■■■□□ 2.13
VEGFA-208ENST00000417285 CSDE1O75534 798 aaKnown RBP28.35■■■□□ 2.13
VEGFA-208ENST00000417285 FGFR4P22455 802 aa28.35■■■□□ 2.13
VEGFA-208ENST00000417285 PPM1AP35813 382 aa28.35■■■□□ 2.13
VEGFA-208ENST00000417285 RFC5P40937 340 aa28.35■■■□□ 2.13
VEGFA-208ENST00000417285 NRIP1P48552 1158 aa28.35■■■□□ 2.13
VEGFA-208ENST00000417285 NR5A1Q13285 461 aa28.35■■■□□ 2.13
VEGFA-208ENST00000417285 TRIM29Q14134 588 aa28.35■■■□□ 2.13
VEGFA-208ENST00000417285 SMAD2Q15796 467 aaKnown RBP28.35■■■□□ 2.13
VEGFA-208ENST00000417285 EARS2Q5JPH6 523 aaKnown RBP28.35■■■□□ 2.13
VEGFA-208ENST00000417285 ZNF598Q86UK7 904 aaKnown RBP28.35■■■□□ 2.13
VEGFA-208ENST00000417285 ADHFE1Q8IWW8 467 aa28.35■■■□□ 2.13
VEGFA-208ENST00000417285 RNF169Q8NCN4 708 aa28.35■■■□□ 2.13
VEGFA-208ENST00000417285 TNFRSF25Q93038 417 aa28.35■■■□□ 2.13
VEGFA-208ENST00000417285 ZSWIM4Q9H7M6 989 aa28.35■■■□□ 2.13
VEGFA-208ENST00000417285 ALADP13716 330 aa28.34■■■□□ 2.13
VEGFA-208ENST00000417285 NDUFV1P49821 464 aa28.34■■■□□ 2.13
VEGFA-208ENST00000417285 KRT17Q04695 432 aa28.34■■■□□ 2.13
VEGFA-208ENST00000417285 SMAD4Q13485 552 aaKnown RBP28.34■■■□□ 2.13
VEGFA-208ENST00000417285 TMEM31Q5JXX7 168 aa28.34■■■□□ 2.13
VEGFA-208ENST00000417285 PLA2G4FQ68DD2 849 aa28.34■■■□□ 2.13
VEGFA-208ENST00000417285 KCNT2Q6UVM3 1135 aa28.34■■■□□ 2.13
VEGFA-208ENST00000417285 LRRC55Q6ZSA7 311 aa28.34■■■□□ 2.13
VEGFA-208ENST00000417285 ADGRD2Q7Z7M1 963 aa28.34■■■□□ 2.13
VEGFA-208ENST00000417285 ZNF558Q96NG5 402 aa28.34■■■□□ 2.13
VEGFA-208ENST00000417285 CDCA3Q99618 268 aaPredicted RBP28.34■■■□□ 2.13
VEGFA-208ENST00000417285 LIMCH1Q9UPQ0 1083 aa28.34■■■□□ 2.13
VEGFA-208ENST00000417285 LINC01565O15544 149 aa28.33■■■□□ 2.13
VEGFA-208ENST00000417285 MBTPS2O43462 519 aa28.33■■■□□ 2.13
VEGFA-208ENST00000417285 JAK2O60674 1132 aa28.33■■■□□ 2.13
VEGFA-208ENST00000417285 GPR37L1O60883 481 aa28.33■■■□□ 2.13
VEGFA-208ENST00000417285 NPEPPSP55786 919 aa28.33■■■□□ 2.13
VEGFA-208ENST00000417285 RBM23Q86U06 439 aaKnown RBP28.33■■■□□ 2.13
VEGFA-208ENST00000417285 POTEDQ86YR6 584 aa28.33■■■□□ 2.13
VEGFA-208ENST00000417285 MRPS27Q92552 414 aaKnown RBP28.33■■■□□ 2.13
VEGFA-208ENST00000417285 KHSRPQ92945 711 aaKnown RBP eCLIP28.33■■■□□ 2.131e-9■■■□□ 15.1
VEGFA-208ENST00000417285 POP1Q99575 1024 aaKnown RBP28.33■■■□□ 2.13
VEGFA-208ENST00000417285 MRPL9Q9BYD2 267 aaKnown RBP28.33■■■□□ 2.13
VEGFA-208ENST00000417285 DHX33Q9H6R0 707 aaKnown RBP28.33■■■□□ 2.13
VEGFA-208ENST00000417285 PCDHA12Q9UN75 941 aa28.33■■■□□ 2.13
VEGFA-208ENST00000417285 C19orf67A6NJJ6 358 aa28.32■■■□□ 2.12
VEGFA-208ENST00000417285 ASAP2O43150 1006 aa28.32■■■□□ 2.12
VEGFA-208ENST00000417285 GAS2O43903 313 aaKnown RBP28.32■■■□□ 2.12
VEGFA-208ENST00000417285 TBX10O75333 385 aa28.32■■■□□ 2.12
VEGFA-208ENST00000417285 EYA4O95677 639 aa28.32■■■□□ 2.12
VEGFA-208ENST00000417285 YWHABP31946 246 aaKnown RBP28.32■■■□□ 2.12
VEGFA-208ENST00000417285 PHKA2P46019 1235 aa28.32■■■□□ 2.12
VEGFA-208ENST00000417285 POLGP54098 1239 aaPredicted RBP28.32■■■□□ 2.12
VEGFA-208ENST00000417285 ZP2Q05996 745 aa28.32■■■□□ 2.12
VEGFA-208ENST00000417285 CLUL1Q15846 466 aa28.32■■■□□ 2.12
VEGFA-208ENST00000417285 CLLU1OSQ5K130 101 aa28.32■■■□□ 2.12
VEGFA-208ENST00000417285 NCAPH2Q6IBW4 605 aa28.32■■■□□ 2.12
VEGFA-208ENST00000417285 MSLNLQ96KJ4 702 aa28.32■■■□□ 2.12
VEGFA-208ENST00000417285 LXNQ9BS40 222 aa28.32■■■□□ 2.12
VEGFA-208ENST00000417285 SPG21Q9NZD8 308 aa28.32■■■□□ 2.12
VEGFA-208ENST00000417285 HCSTQ9UBK5 93 aa28.32■■■□□ 2.12
VEGFA-208ENST00000417285 COL4A3BPQ9Y5P4 624 aa28.32■■■□□ 2.12
VEGFA-208ENST00000417285 FNDC1Q4ZHG4 1894 aaPredicted RBP28.32■■■□□ 2.12
VEGFA-208ENST00000417285 CARNS1A5YM72 827 aa28.31■■■□□ 2.12
VEGFA-208ENST00000417285 BTBD18B2RXH4 712 aa28.31■■■□□ 2.12
VEGFA-208ENST00000417285 ERVFC1P60507 584 aa28.31■■■□□ 2.12
VEGFA-208ENST00000417285 SPIRE1Q08AE8 756 aa28.31■■■□□ 2.12
VEGFA-208ENST00000417285 TWF2Q6IBS0 349 aaKnown RBP28.31■■■□□ 2.12
VEGFA-208ENST00000417285 CATSPER4Q7RTX7 472 aa28.31■■■□□ 2.12
VEGFA-208ENST00000417285 TCP11Q8WWU5 503 aa28.31■■■□□ 2.12
VEGFA-208ENST00000417285 PRPF31Q8WWY3 499 aaKnown RBP28.31■■■□□ 2.12
VEGFA-208ENST00000417285 PSPC1Q8WXF1 523 aaKnown RBP28.31■■■□□ 2.12
VEGFA-208ENST00000417285 NLRP4Q96MN2 994 aa28.31■■■□□ 2.12
VEGFA-208ENST00000417285 LRFN3Q9BTN0 628 aa28.31■■■□□ 2.12
VEGFA-208ENST00000417285 NGRNQ9NPE2 291 aaKnown RBP28.31■■■□□ 2.12
VEGFA-208ENST00000417285 RGL1Q9NZL6 768 aa28.31■■■□□ 2.12
VEGFA-208ENST00000417285 CLEC1BQ9P126 229 aa28.31■■■□□ 2.12
VEGFA-208ENST00000417285 WRAP73Q9P2S5 460 aaPredicted RBP28.31■■■□□ 2.12
VEGFA-208ENST00000417285 FAM205CA6NFA0 338 aa28.3■■■□□ 2.12
VEGFA-208ENST00000417285 FSCN2O14926 492 aa28.3■■■□□ 2.12
VEGFA-208ENST00000417285 ZNF623O75123 536 aa28.3■■■□□ 2.12
VEGFA-208ENST00000417285 RAB27AP51159 221 aa28.3■■■□□ 2.12
VEGFA-208ENST00000417285 FOSBP53539 338 aa28.3■■■□□ 2.12
VEGFA-208ENST00000417285 COASYQ13057 564 aa28.3■■■□□ 2.12
VEGFA-208ENST00000417285 C8orf34Q49A92 452 aa28.3■■■□□ 2.12
VEGFA-208ENST00000417285 SRGAP1Q7Z6B7 1085 aa28.3■■■□□ 2.12
VEGFA-208ENST00000417285 KSR1Q8IVT5 923 aa28.3■■■□□ 2.12
VEGFA-208ENST00000417285 DIS3L2Q8IYB7 885 aaKnown RBP28.3■■■□□ 2.12
VEGFA-208ENST00000417285 ZNF579Q8NAF0 562 aaKnown RBP28.3■■■□□ 2.12
VEGFA-208ENST00000417285 HELQQ8TDG4 1101 aa28.3■■■□□ 2.12
VEGFA-208ENST00000417285 DYDC2Q96IM9 177 aa28.3■■■□□ 2.12
VEGFA-208ENST00000417285 IFT122Q9HBG6 1241 aa28.3■■■□□ 2.12
VEGFA-208ENST00000417285 PIN4Q9Y237 131 aaKnown RBP28.3■■■□□ 2.12
VEGFA-208ENST00000417285 SLITRK3O94933 977 aa28.29■■■□□ 2.12
VEGFA-208ENST00000417285 ATF7P17544 494 aaPredicted RBP28.29■■■□□ 2.12
VEGFA-208ENST00000417285 ALDH7A1P49419 539 aaKnown RBP28.29■■■□□ 2.12
VEGFA-208ENST00000417285 ST3GAL1Q11201 340 aa28.29■■■□□ 2.12
VEGFA-208ENST00000417285 CALCRLQ16602 461 aa28.29■■■□□ 2.12
VEGFA-208ENST00000417285 XKR9Q5GH70 373 aa28.29■■■□□ 2.12
VEGFA-208ENST00000417285 TPH2Q8IWU9 490 aa28.29■■■□□ 2.12
VEGFA-208ENST00000417285 PCDHGC5Q9Y5F6 944 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms