RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 KCNH4Q9UQ05 1017 aa13.8□□□□□ -0.2
SCAF8-203ENST00000417268 PCDHB4Q9Y5E5 795 aa13.8□□□□□ -0.2
SCAF8-203ENST00000417268 MRFAP1Q9Y605 127 aa13.8□□□□□ -0.2
SCAF8-203ENST00000417268 SLC26A4O43511 780 aa13.8□□□□□ -0.2
SCAF8-203ENST00000417268 GAS8O95995 478 aa13.8□□□□□ -0.2
SCAF8-203ENST00000417268 GCLCP48506 637 aaPredicted RBP13.8□□□□□ -0.2
SCAF8-203ENST00000417268 CCZ1BP86790 482 aa13.8□□□□□ -0.2
SCAF8-203ENST00000417268 CCZ1P86791 482 aaPredicted RBP13.8□□□□□ -0.2
SCAF8-203ENST00000417268 XKR3Q5GH77 459 aa13.8□□□□□ -0.2
SCAF8-203ENST00000417268 USP50Q70EL3 339 aaPredicted RBP13.8□□□□□ -0.2
SCAF8-203ENST00000417268 XXYLT1Q8NBI6 393 aa13.8□□□□□ -0.2
SCAF8-203ENST00000417268 WDR24Q96S15 920 aa13.8□□□□□ -0.2
SCAF8-203ENST00000417268 PEAK1Q9H792 1746 aa13.8□□□□□ -0.2
SCAF8-203ENST00000417268 TBC1D8O95759 1140 aa13.8□□□□□ -0.2
SCAF8-203ENST00000417268 RPS6P62753 249 aaKnown RBP13.8□□□□□ -0.2
SCAF8-203ENST00000417268 ACTN3Q08043 901 aaPredicted RBP13.8□□□□□ -0.2
SCAF8-203ENST00000417268 METTL23Q86XA0 190 aa13.8□□□□□ -0.2
SCAF8-203ENST00000417268 SCFD2Q8WU76 684 aa13.8□□□□□ -0.2
SCAF8-203ENST00000417268 TOPORSQ9NS56 1045 aaPredicted RBP13.8□□□□□ -0.2
SCAF8-203ENST00000417268 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.8□□□□□ -0.2
SCAF8-203ENST00000417268 TNFAIP2Q03169 654 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 THNSL1Q8IYQ7 743 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 DAGLBQ8NCG7 672 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 CAMKK2Q96RR4 588 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 MXRA8Q9BRK3 442 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 DDX4Q9NQI0 724 aaKnown RBP13.79□□□□□ -0.2
SCAF8-203ENST00000417268 GCNT4Q9P109 453 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 NOVA2Q9UNW9 492 aaKnown RBP13.79□□□□□ -0.2
SCAF8-203ENST00000417268 CAPN9O14815 690 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 OPHN1O60890 802 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 SRGAP2O75044 1071 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 MOCS3O95396 460 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 ZKSCAN8Q15776 578 aaPredicted RBP13.79□□□□□ -0.2
SCAF8-203ENST00000417268 CYFIP1Q7L576 1253 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 GSPT2Q8IYD1 628 aaKnown RBP13.79□□□□□ -0.2
SCAF8-203ENST00000417268 SAMD3Q8N6K7 520 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 OR6J1Q8NGC5 347 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 MAP3K20Q9NYL2 800 aaKnown RBP13.79□□□□□ -0.2
SCAF8-203ENST00000417268 PPP1R9AQ9ULJ8 1098 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 ATP8A1Q9Y2Q0 1164 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 BCL9LQ86UU0 1499 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 DENND3A2RUS2 1198 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 SLC16A4O15374 487 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 TAF11Q15544 211 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 CCDC13Q8IYE1 715 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 TIPINQ9BVW5 301 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 PARP4Q9UKK3 1724 aaKnown RBP13.79□□□□□ -0.2
SCAF8-203ENST00000417268 BAG2O95816 211 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 CASP1P29466 404 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 MAP1SQ66K74 1059 aaPredicted RBP13.79□□□□□ -0.2
SCAF8-203ENST00000417268 RNF168Q8IYW5 571 aaPredicted RBP13.79□□□□□ -0.2
SCAF8-203ENST00000417268 GUF1Q8N442 669 aaKnown RBP13.79□□□□□ -0.2
SCAF8-203ENST00000417268 MAIP1Q8WWC4 291 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 NUDT12Q9BQG2 462 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 KIAA1683Q9H0B3 1180 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 VPS37BQ9H9H4 285 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 RGL1Q9NZL6 768 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 NFU1Q9UMS0 254 aa13.79□□□□□ -0.2
SCAF8-203ENST00000417268 GOLGA8IPA6NC78 632 aa13.78□□□□□ -0.2
SCAF8-203ENST00000417268 GOLGA8JA6NMD2 632 aa13.78□□□□□ -0.2
SCAF8-203ENST00000417268 GH1P01241 217 aa13.78□□□□□ -0.2
SCAF8-203ENST00000417268 TBC1D1Q86TI0 1168 aaPredicted RBP13.78□□□□□ -0.2
SCAF8-203ENST00000417268 BPIFA3Q9BQP9 254 aa13.78□□□□□ -0.2
SCAF8-203ENST00000417268 SNX25Q9H3E2 840 aa13.78□□□□□ -0.2
SCAF8-203ENST00000417268 CXCL11O14625 94 aa13.78□□□□□ -0.2
SCAF8-203ENST00000417268 STAM2O75886 525 aa13.78□□□□□ -0.2
SCAF8-203ENST00000417268 STK10O94804 968 aaKnown RBP13.78□□□□□ -0.2
SCAF8-203ENST00000417268 CYP2B6P20813 491 aa13.78□□□□□ -0.2
SCAF8-203ENST00000417268 VPS41P49754 854 aa13.78□□□□□ -0.2
SCAF8-203ENST00000417268 DHX9Q08211 1270 aaKnown RBP13.78□□□□□ -0.2
SCAF8-203ENST00000417268 KNOP1Q1ED39 458 aaKnown RBP13.78□□□□□ -0.2
SCAF8-203ENST00000417268 PPP1R2P3Q6NXS1 205 aa13.78□□□□□ -0.2
SCAF8-203ENST00000417268 SMARCAD1Q9H4L7 1026 aa13.78□□□□□ -0.2
SCAF8-203ENST00000417268 NHEJ1Q9H9Q4 299 aaPredicted RBP13.78□□□□□ -0.2
SCAF8-203ENST00000417268 GPRC5DQ9NZD1 345 aa13.78□□□□□ -0.2
SCAF8-203ENST00000417268 NXF1Q9UBU9 619 aaKnown RBP13.78□□□□□ -0.2
SCAF8-203ENST00000417268 PABPN1LA6NDY0 278 aaKnown RBP13.78□□□□□ -0.2
SCAF8-203ENST00000417268 HMGB1P1B2RPK0 211 aaPredicted RBP13.78□□□□□ -0.2
SCAF8-203ENST00000417268 NR3C1P04150 777 aa13.78□□□□□ -0.2
SCAF8-203ENST00000417268 VCAM1P19320 739 aa13.78□□□□□ -0.2
SCAF8-203ENST00000417268 YWHABP31946 246 aaKnown RBP13.78□□□□□ -0.2
SCAF8-203ENST00000417268 NAALADL2Q58DX5 795 aa13.78□□□□□ -0.2
SCAF8-203ENST00000417268 TCP11X2Q5H9J9 407 aa13.78□□□□□ -0.2
SCAF8-203ENST00000417268 RHPN2Q8IUC4 686 aa13.78□□□□□ -0.2
SCAF8-203ENST00000417268 TYW1Q9NV66 732 aaKnown RBP13.78□□□□□ -0.2
SCAF8-203ENST00000417268 LMO7Q8WWI1 1683 aa13.78□□□□□ -0.2
SCAF8-203ENST00000417268 DGAT1O75907 488 aa13.78□□□□□ -0.2
SCAF8-203ENST00000417268 HADHQ16836 314 aaKnown RBP13.78□□□□□ -0.2
SCAF8-203ENST00000417268 SH2D4BQ5SQS7 431 aa13.78□□□□□ -0.2
SCAF8-203ENST00000417268 POLR3FQ9H1D9 316 aaPredicted RBP13.78□□□□□ -0.2
SCAF8-203ENST00000417268 I3L4J1 428 aa13.77□□□□□ -0.2
SCAF8-203ENST00000417268 ZBED6P86452 979 aa13.77□□□□□ -0.2
SCAF8-203ENST00000417268 KCTD17Q8N5Z5 321 aa13.77□□□□□ -0.2
SCAF8-203ENST00000417268 WHAMMQ8TF30 809 aa13.77□□□□□ -0.2
SCAF8-203ENST00000417268 DYNC1LI2O43237 492 aaPredicted RBP13.77□□□□□ -0.21
SCAF8-203ENST00000417268 FTCDO95954 541 aa13.77□□□□□ -0.21
SCAF8-203ENST00000417268 PRCPP42785 496 aa13.77□□□□□ -0.21
SCAF8-203ENST00000417268 TEX2Q8IWB9 1127 aa13.77□□□□□ -0.21
SCAF8-203ENST00000417268 FBXL16Q8N461 479 aa13.77□□□□□ -0.21
SCAF8-203ENST00000417268 CEP120Q8N960 986 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms