RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 LRP5O75197 1615 aa15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 ATP6V1C1P21283 382 aa15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 SP100P23497 879 aaPredicted RBP15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 FKBP3Q00688 224 aaKnown RBP15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 LRRC23Q53EV4 343 aaPredicted RBP15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 UNC13DQ70J99 1090 aa15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 ASRGL1Q7L266 308 aa15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 EXOC3L1Q86VI1 746 aa15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 DNAJC9Q8WXX5 260 aa15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 SYN2Q92777 582 aaPredicted RBP15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 MXD3Q9BW11 206 aa15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 ZHX3Q9H4I2 956 aa15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 MAGEF1Q9HAY2 307 aa15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 OSGEPQ9NPF4 335 aa15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 MCM9Q9NXL9 1143 aa15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 HAO1Q9UJM8 370 aa15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 AMFRQ9UKV5 643 aa15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 BAZ2AQ9UIF9 1905 aaKnown RBP15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 ACSL3O95573 720 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 CNGA1P29973 690 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 PEX5P50542 639 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 MTHFD1LQ6UB35 978 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 SUPT20HQ8NEM7 779 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 DYNLL2Q96FJ2 89 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 FAM210AQ96ND0 272 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 TGS1Q96RS0 853 aaKnown RBP15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 TXLNGYQ9BZA5 131 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 ZDHHC18Q9NUE0 388 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 WDR35Q9P2L0 1181 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 BCORQ6W2J9 1755 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 H2AFZP0C0S5 128 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 PLCG2P16885 1265 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 STX2P32856 288 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 PTDSS1P48651 473 aaKnown RBP15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 CACNB1Q02641 598 aaPredicted RBP15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 AUHQ13825 339 aaKnown RBP15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 CCDC6Q16204 474 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 KIAA1755Q5JYT7 1200 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 AADACL2Q6P093 401 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 SEPT14Q6ZU15 432 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 H2AFVQ71UI9 128 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 TRIM74Q86UV6 250 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 TRIM73Q86UV7 250 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 JAMLQ86YT9 394 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 MYOCDQ8IZQ8 938 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 TTC8Q8TAM2 541 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 TBC1D16Q8TBP0 767 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 STK32AQ8WU08 396 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 LARP4BQ92615 738 aaKnown RBP15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 STMN4Q9H169 189 aaPredicted RBP15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 VCXQ9H320 206 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 LMCD1Q9NZU5 365 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 LRRC42Q9Y546 428 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 RREB1Q92766 1687 aa15.85■□□□□ 0.13
NCKIPSD-204ENST00000416649 PEX11AO75192 247 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 ENTPD5O75356 428 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 OAS1P00973 400 aaKnown RBP15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 TPBGLP0DKB5 382 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 GNAZP19086 355 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 SLC9A1P19634 815 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 KLRC3Q07444 240 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 DUPD1Q68J44 220 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 SLC44A5Q8NCS7 719 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 DDX12PQ92771 950 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 C18orf8Q96DM3 657 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 FGD4Q96M96 766 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 MOV10L1Q9BXT6 1211 aaKnown RBP15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 TMX4Q9H1E5 349 aaPredicted RBP15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 ARPP21Q9UBL0 812 aaPredicted RBP15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 PTPN22Q9Y2R2 807 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 NHSQ6T4R5 1651 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 RPTORQ8N122 1335 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 UNC5CO95185 931 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 NPTXRO95502 500 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 LDHBP07195 334 aaKnown RBP15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 MMP10P09238 476 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 GM2AP17900 193 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 TNIP1Q15025 636 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 LLGL1Q15334 1064 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 DOK7Q18PE1 504 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 NT5DC3Q86UY8 548 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 ERP27Q96DN0 273 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 MMTAG2Q9BU76 263 aaKnown RBP15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 CCDC134Q9H6E4 229 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 DNAJC17Q9NVM6 304 aaKnown RBP15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 TMOD4Q9NZQ9 345 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 MTRF1LQ9UGC7 380 aaKnown RBP15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 POLLQ9UGP5 575 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 TBK1Q9UHD2 729 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 TNRC6CQ9HCJ0 1690 aaKnown RBP15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 BHMG1C9JSJ3 638 aaPredicted RBP15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 POLRMTO00411 1230 aaKnown RBP15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 PYGBP11216 843 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 CCNG1P51959 295 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 MGAT5Q09328 741 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 CYP39A1Q9NYL5 469 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 AIPL1Q9NZN9 384 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 CTNNAL1Q9UBT7 734 aa15.84■□□□□ 0.13
NCKIPSD-204ENST00000416649 SBF2Q86WG5 1849 aa15.83■□□□□ 0.13
NCKIPSD-204ENST00000416649 RCN2Q14257 317 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms