RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 NCAPH2Q6IBW4 605 aa19.69■□□□□ 0.74
PDLIM2-208ENST00000416159 PDE12Q6L8Q7 609 aaKnown RBP19.69■□□□□ 0.74
PDLIM2-208ENST00000416159 ADGRD2Q7Z7M1 963 aa19.69■□□□□ 0.74
PDLIM2-208ENST00000416159 LRRC43Q8N309 656 aa19.69■□□□□ 0.74
PDLIM2-208ENST00000416159 EFHBQ8N7U6 833 aa19.69■□□□□ 0.74
PDLIM2-208ENST00000416159 RNF169Q8NCN4 708 aa19.69■□□□□ 0.74
PDLIM2-208ENST00000416159 SLC7A3Q8WY07 619 aa19.69■□□□□ 0.74
PDLIM2-208ENST00000416159 TLR9Q9NR96 1032 aa19.69■□□□□ 0.74
PDLIM2-208ENST00000416159 HCSTQ9UBK5 93 aa19.69■□□□□ 0.74
PDLIM2-208ENST00000416159 PUF60Q9UHX1 559 aaKnown RBP19.69■□□□□ 0.74
PDLIM2-208ENST00000416159 LZTS1Q9Y250 596 aa19.69■□□□□ 0.74
PDLIM2-208ENST00000416159 MUC3AQ02505 3323 aa19.69■□□□□ 0.74
PDLIM2-208ENST00000416159 PLXNA4Q9HCM2 1894 aa19.69■□□□□ 0.74
PDLIM2-208ENST00000416159 FAM205CA6NFA0 338 aa19.68■□□□□ 0.74
PDLIM2-208ENST00000416159 SEC24BO95487 1268 aa19.68■□□□□ 0.74
PDLIM2-208ENST00000416159 SKIP12755 728 aa19.68■□□□□ 0.74
PDLIM2-208ENST00000416159 RFC5P40937 340 aa19.68■□□□□ 0.74
PDLIM2-208ENST00000416159 NRIP1P48552 1158 aa19.68■□□□□ 0.74
PDLIM2-208ENST00000416159 PLCB3Q01970 1234 aa19.68■□□□□ 0.74
PDLIM2-208ENST00000416159 LRRC55Q6ZSA7 311 aa19.68■□□□□ 0.74
PDLIM2-208ENST00000416159 ZNF598Q86UK7 904 aaKnown RBP19.68■□□□□ 0.74
PDLIM2-208ENST00000416159 ZNF558Q96NG5 402 aa19.68■□□□□ 0.74
PDLIM2-208ENST00000416159 LXNQ9BS40 222 aa19.68■□□□□ 0.74
PDLIM2-208ENST00000416159 TRAIPQ9BWF2 469 aa19.68■□□□□ 0.74
PDLIM2-208ENST00000416159 DHX33Q9H6R0 707 aaKnown RBP19.68■□□□□ 0.74
PDLIM2-208ENST00000416159 ZSWIM4Q9H7M6 989 aa19.68■□□□□ 0.74
PDLIM2-208ENST00000416159 WRAP73Q9P2S5 460 aaPredicted RBP19.68■□□□□ 0.74
PDLIM2-208ENST00000416159 CD207Q9UJ71 328 aa19.68■□□□□ 0.74
PDLIM2-208ENST00000416159 BTBD18B2RXH4 712 aa19.67■□□□□ 0.74
PDLIM2-208ENST00000416159 PI4K2BG5E9Z4 385 aa19.67■□□□□ 0.74
PDLIM2-208ENST00000416159 LINC01565O15544 149 aa19.67■□□□□ 0.74
PDLIM2-208ENST00000416159 MBTPS2O43462 519 aa19.67■□□□□ 0.74
PDLIM2-208ENST00000416159 GAS2O43903 313 aaKnown RBP19.67■□□□□ 0.74
PDLIM2-208ENST00000416159 JAK2O60674 1132 aa19.67■□□□□ 0.74
PDLIM2-208ENST00000416159 TBX10O75333 385 aa19.67■□□□□ 0.74
PDLIM2-208ENST00000416159 YWHABP31946 246 aaKnown RBP19.67■□□□□ 0.74
PDLIM2-208ENST00000416159 NDUFV1P49821 464 aa19.67■□□□□ 0.74
PDLIM2-208ENST00000416159 POLGP54098 1239 aaPredicted RBP19.67■□□□□ 0.74
PDLIM2-208ENST00000416159 SPIRE1Q08AE8 756 aa19.67■□□□□ 0.74
PDLIM2-208ENST00000416159 CLLU1OSQ5K130 101 aa19.67■□□□□ 0.74
PDLIM2-208ENST00000416159 KCNT2Q6UVM3 1135 aa19.67■□□□□ 0.74
PDLIM2-208ENST00000416159 DIS3L2Q8IYB7 885 aaKnown RBP19.67■□□□□ 0.74
PDLIM2-208ENST00000416159 RSPH1Q8WYR4 309 aa19.67■□□□□ 0.74
PDLIM2-208ENST00000416159 MRPS27Q92552 414 aaKnown RBP19.67■□□□□ 0.74
PDLIM2-208ENST00000416159 DYDC2Q96IM9 177 aa19.67■□□□□ 0.74
PDLIM2-208ENST00000416159 NLRP4Q96MN2 994 aa19.67■□□□□ 0.74
PDLIM2-208ENST00000416159 TLE6Q9H808 572 aa19.67■□□□□ 0.74
PDLIM2-208ENST00000416159 RGL1Q9NZL6 768 aa19.67■□□□□ 0.74
PDLIM2-208ENST00000416159 PCDHA12Q9UN75 941 aa19.67■□□□□ 0.74
PDLIM2-208ENST00000416159 COL4A3BPQ9Y5P4 624 aa19.67■□□□□ 0.74
PDLIM2-208ENST00000416159 FSD2A1L4K1 749 aa19.66■□□□□ 0.74
PDLIM2-208ENST00000416159 PPM1AP35813 382 aa19.66■□□□□ 0.74
PDLIM2-208ENST00000416159 PHKA2P46019 1235 aa19.66■□□□□ 0.74
PDLIM2-208ENST00000416159 KRT17Q04695 432 aa19.66■□□□□ 0.74
PDLIM2-208ENST00000416159 SMAD4Q13485 552 aaKnown RBP19.66■□□□□ 0.74
PDLIM2-208ENST00000416159 SMAD2Q15796 467 aaKnown RBP19.66■□□□□ 0.74
PDLIM2-208ENST00000416159 CLUL1Q15846 466 aa19.66■□□□□ 0.74
PDLIM2-208ENST00000416159 CALCRLQ16602 461 aa19.66■□□□□ 0.74
PDLIM2-208ENST00000416159 TWF2Q6IBS0 349 aaKnown RBP19.66■□□□□ 0.74
PDLIM2-208ENST00000416159 CATSPER4Q7RTX7 472 aa19.66■□□□□ 0.74
PDLIM2-208ENST00000416159 RBM23Q86U06 439 aaKnown RBP19.66■□□□□ 0.74
PDLIM2-208ENST00000416159 KSR1Q8IVT5 923 aa19.66■□□□□ 0.74
PDLIM2-208ENST00000416159 ADHFE1Q8IWW8 467 aa19.66■□□□□ 0.74
PDLIM2-208ENST00000416159 ZNF579Q8NAF0 562 aaKnown RBP19.66■□□□□ 0.74
PDLIM2-208ENST00000416159 HELQQ8TDG4 1101 aa19.66■□□□□ 0.74
PDLIM2-208ENST00000416159 TCP11Q8WWU5 503 aa19.66■□□□□ 0.74
PDLIM2-208ENST00000416159 PSPC1Q8WXF1 523 aaKnown RBP19.66■□□□□ 0.74
PDLIM2-208ENST00000416159 KHSRPQ92945 711 aaKnown RBP eCLIP19.66■□□□□ 0.74
PDLIM2-208ENST00000416159 CDCA3Q99618 268 aaPredicted RBP19.66■□□□□ 0.74
PDLIM2-208ENST00000416159 MRPL9Q9BYD2 267 aaKnown RBP19.66■□□□□ 0.74
PDLIM2-208ENST00000416159 LIMCH1Q9UPQ0 1083 aa19.66■□□□□ 0.74
PDLIM2-208ENST00000416159 FSCN2O14926 492 aa19.65■□□□□ 0.74
PDLIM2-208ENST00000416159 ASAP2O43150 1006 aa19.65■□□□□ 0.74
PDLIM2-208ENST00000416159 SLITRK3O94933 977 aa19.65■□□□□ 0.74
PDLIM2-208ENST00000416159 ATF7P17544 494 aaPredicted RBP19.65■□□□□ 0.74
PDLIM2-208ENST00000416159 RAB27AP51159 221 aa19.65■□□□□ 0.74
PDLIM2-208ENST00000416159 ERVFC1P60507 584 aa19.65■□□□□ 0.74
PDLIM2-208ENST00000416159 ZP2Q05996 745 aa19.65■□□□□ 0.74
PDLIM2-208ENST00000416159 CTTNQ14247 550 aaKnown RBP19.65■□□□□ 0.74
PDLIM2-208ENST00000416159 XKR9Q5GH70 373 aa19.65■□□□□ 0.74
PDLIM2-208ENST00000416159 TMEM31Q5JXX7 168 aa19.65■□□□□ 0.74
PDLIM2-208ENST00000416159 SRGAP1Q7Z6B7 1085 aa19.65■□□□□ 0.74
PDLIM2-208ENST00000416159 TPH2Q8IWU9 490 aa19.65■□□□□ 0.74
PDLIM2-208ENST00000416159 PRPF31Q8WWY3 499 aaKnown RBP19.65■□□□□ 0.74
PDLIM2-208ENST00000416159 TMEM143Q96AN5 459 aa19.65■□□□□ 0.74
PDLIM2-208ENST00000416159 MSLNLQ96KJ4 702 aa19.65■□□□□ 0.74
PDLIM2-208ENST00000416159 IFT122Q9HBG6 1241 aa19.65■□□□□ 0.74
PDLIM2-208ENST00000416159 SPG21Q9NZD8 308 aa19.65■□□□□ 0.74
PDLIM2-208ENST00000416159 PIN4Q9Y237 131 aaKnown RBP19.65■□□□□ 0.74
PDLIM2-208ENST00000416159 PCDHGC5Q9Y5F6 944 aa19.65■□□□□ 0.74
PDLIM2-208ENST00000416159 C19orf67A6NJJ6 358 aa19.64■□□□□ 0.73
PDLIM2-208ENST00000416159 GPR37L1O60883 481 aa19.64■□□□□ 0.73
PDLIM2-208ENST00000416159 ZNF623O75123 536 aa19.64■□□□□ 0.73
PDLIM2-208ENST00000416159 EYA4O95677 639 aa19.64■□□□□ 0.73
PDLIM2-208ENST00000416159 FOSBP53539 338 aa19.64■□□□□ 0.73
PDLIM2-208ENST00000416159 CYP4A11Q02928 519 aa19.64■□□□□ 0.73
PDLIM2-208ENST00000416159 ST3GAL1Q11201 340 aa19.64■□□□□ 0.73
PDLIM2-208ENST00000416159 COASYQ13057 564 aa19.64■□□□□ 0.73
PDLIM2-208ENST00000416159 SAFBQ15424 915 aaKnown RBP eCLIP19.64■□□□□ 0.73
PDLIM2-208ENST00000416159 POP1Q99575 1024 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms