RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 KRT17Q04695 432 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 GIT2Q14161 759 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 ZNF174Q15697 407 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 UGCGQ16739 394 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 KIZQ2M2Z5 673 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 EPC2Q52LR7 807 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 HYIQ5T013 277 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 ATL3Q6DD88 541 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 MCTP1Q6DN14 999 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 MRPL10Q7Z7H8 261 aaKnown RBP7.11□□□□□ -1.27
USP54-202ENST00000413442 FERMT3Q86UX7 667 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 FAM228AQ86W67 206 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 RHPN2Q8IUC4 686 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 ABI1Q8IZP0 508 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 KIFAP3Q92845 792 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 MRPL38Q96DV4 380 aaKnown RBP7.11□□□□□ -1.27
USP54-202ENST00000413442 FAM161BQ96MY7 647 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 SCLT1Q96NL6 688 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 OSMRQ99650 979 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 CDHR5Q9HBB8 845 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 RC3H2Q9HBD1 1191 aaKnown RBP7.11□□□□□ -1.27
USP54-202ENST00000413442 RGL1Q9NZL6 768 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 GINS2Q9Y248 185 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 LZTS1Q9Y250 596 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 RBM19Q9Y4C8 960 aaKnown RBP7.11□□□□□ -1.27
USP54-202ENST00000413442 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.11□□□□□ -1.27
USP54-202ENST00000413442 MTCH2Q9Y6C9 303 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 NLRC5Q86WI3 1866 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 MYO9BQ13459 2157 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 RANBP2P49792 3224 aaKnown RBP7.1□□□□□ -1.27
USP54-202ENST00000413442 A0A087WZ62 844 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 ARHGEF35A5YM69 484 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 H0YCG3 227 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 K7ELQ4 463 aaPredicted RBP7.1□□□□□ -1.27
USP54-202ENST00000413442 ERLIN2O94905 339 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 EYA4O95677 639 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 C1RP00736 705 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 LAG3P18627 525 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 ATP2B1P20020 1258 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 IGFBP4P22692 258 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 ARL2P36404 184 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 LONP1P36776 959 aaKnown RBP7.1□□□□□ -1.27
USP54-202ENST00000413442 NAMPTP43490 491 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 TOB1P50616 345 aaPredicted RBP7.1□□□□□ -1.27
USP54-202ENST00000413442 CLCN3P51790 818 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 NPEPPSP55786 919 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 MRPS5P82675 430 aaKnown RBP7.1□□□□□ -1.27
USP54-202ENST00000413442 PLCB3Q01970 1234 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 GUCY1B3Q02153 619 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 TMEM62Q0P6H9 643 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 LAMTOR4Q0VGL1 99 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 GPM6BQ13491 265 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 CTTNQ14247 550 aaKnown RBP7.1□□□□□ -1.27
USP54-202ENST00000413442 EMC2Q15006 297 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 FAM187BQ17R55 369 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 TCTN1Q2MV58 587 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 TIGD5Q53EQ6 642 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 CATSPER4Q7RTX7 472 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 ECHDC2Q86YB7 292 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 ZBTB8OSQ8IWT0 167 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 LRRC71Q8N4P6 559 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 ARNTL2Q8WYA1 636 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 KCNN1Q92952 543 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 IFT74Q96LB3 600 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 FDXACB1Q9BRP7 624 aaPredicted RBP7.1□□□□□ -1.27
USP54-202ENST00000413442 NTPCRQ9BSD7 190 aaKnown RBP7.1□□□□□ -1.27
USP54-202ENST00000413442 TMEM60Q9H2L4 133 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 TMX1Q9H3N1 280 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 IFT122Q9HBG6 1241 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 PRMT7Q9NVM4 692 aaPredicted RBP7.1□□□□□ -1.27
USP54-202ENST00000413442 FAM50BQ9Y247 325 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 GTF3C3Q9Y5Q9 886 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 FNDC1Q4ZHG4 1894 aaPredicted RBP7.1□□□□□ -1.27
USP54-202ENST00000413442 ARID2Q68CP9 1835 aa7.1□□□□□ -1.27
USP54-202ENST00000413442 FAM205CA6NFA0 338 aa7.09□□□□□ -1.27
USP54-202ENST00000413442 NR1I2O75469 434 aa7.09□□□□□ -1.27
USP54-202ENST00000413442 MYOGP15173 224 aa7.09□□□□□ -1.27
USP54-202ENST00000413442 NCLP19338 710 aaKnown RBP7.09□□□□□ -1.27
USP54-202ENST00000413442 CCT6AP40227 531 aaKnown RBP7.09□□□□□ -1.27
USP54-202ENST00000413442 ALDH7A1P49419 539 aaKnown RBP7.09□□□□□ -1.27
USP54-202ENST00000413442 SMTNP53814 917 aa7.09□□□□□ -1.27
USP54-202ENST00000413442 GRB10Q13322 594 aa7.09□□□□□ -1.27
USP54-202ENST00000413442 NOTUMQ6P988 496 aa7.09□□□□□ -1.27
USP54-202ENST00000413442 PADI6Q6TGC4 694 aa7.09□□□□□ -1.27
USP54-202ENST00000413442 GLB1LQ6UWU2 654 aa7.09□□□□□ -1.27
USP54-202ENST00000413442 TRMT1LQ7Z2T5 733 aaKnown RBP7.09□□□□□ -1.27
USP54-202ENST00000413442 ZNF598Q86UK7 904 aaKnown RBP7.09□□□□□ -1.27
USP54-202ENST00000413442 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.09□□□□□ -1.27
USP54-202ENST00000413442 GPR65Q8IYL9 337 aa7.09□□□□□ -1.27
USP54-202ENST00000413442 RNF149Q8NC42 400 aa7.09□□□□□ -1.27
USP54-202ENST00000413442 TMEM40Q8WWA1 233 aa7.09□□□□□ -1.27
USP54-202ENST00000413442 HLA-CQ95604 372 aa7.09□□□□□ -1.27
USP54-202ENST00000413442 GJA10Q969M2 543 aa7.09□□□□□ -1.27
USP54-202ENST00000413442 CALML4Q96GE6 196 aa7.09□□□□□ -1.27
USP54-202ENST00000413442 DRC1Q96MC2 740 aa7.09□□□□□ -1.27
USP54-202ENST00000413442 UIMC1Q96RL1 719 aa7.09□□□□□ -1.27
USP54-202ENST00000413442 TSPAN18Q96SJ8 248 aa7.09□□□□□ -1.27
USP54-202ENST00000413442 CDCA3Q99618 268 aaPredicted RBP7.09□□□□□ -1.27
USP54-202ENST00000413442 TMEM134Q9H6X4 195 aa7.09□□□□□ -1.27
USP54-202ENST00000413442 AGPAT5Q9NUQ2 364 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms