RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 DSG1Q02413 1049 aa6.73□□□□□ -1.33
HDAC9-205ENST00000411993 SAFB2Q14151 953 aaKnown RBP eCLIP6.73□□□□□ -1.33
HDAC9-205ENST00000411993 ACAP1Q15027 740 aa6.73□□□□□ -1.33
HDAC9-205ENST00000411993 KIAA1841Q6NSI8 718 aa6.73□□□□□ -1.33
HDAC9-205ENST00000411993 C1orf210Q8IVY1 113 aa6.73□□□□□ -1.33
HDAC9-205ENST00000411993 AHI1Q8N157 1196 aa6.73□□□□□ -1.33
HDAC9-205ENST00000411993 Q8N1X5 172 aa6.73□□□□□ -1.33
HDAC9-205ENST00000411993 EXTL1Q92935 676 aa6.73□□□□□ -1.33
HDAC9-205ENST00000411993 TARS2Q9BW92 718 aaKnown RBP6.73□□□□□ -1.33
HDAC9-205ENST00000411993 MTFR1LQ9H019 292 aa6.73□□□□□ -1.33
HDAC9-205ENST00000411993 ZMAT4Q9H898 229 aa6.73□□□□□ -1.33
HDAC9-205ENST00000411993 CYP27B1O15528 508 aa6.72□□□□□ -1.33
HDAC9-205ENST00000411993 SCNN1BP51168 640 aa6.72□□□□□ -1.33
HDAC9-205ENST00000411993 OCRLQ01968 901 aa6.72□□□□□ -1.33
HDAC9-205ENST00000411993 FOXE3Q13461 319 aa6.72□□□□□ -1.33
HDAC9-205ENST00000411993 PCBP1Q15365 356 aaKnown RBP eCLIP6.72□□□□□ -1.33
HDAC9-205ENST00000411993 KRTAP5-3Q6L8H2 238 aa6.72□□□□□ -1.33
HDAC9-205ENST00000411993 KANSL1Q7Z3B3 1105 aa6.72□□□□□ -1.33
HDAC9-205ENST00000411993 CLEC14AQ86T13 490 aa6.72□□□□□ -1.33
HDAC9-205ENST00000411993 PLA2G15Q8NCC3 412 aa6.72□□□□□ -1.33
HDAC9-205ENST00000411993 FERMT2Q96AC1 680 aa6.72□□□□□ -1.33
HDAC9-205ENST00000411993 MFSD3Q96ES6 412 aa6.72□□□□□ -1.33
HDAC9-205ENST00000411993 MPHOSPH9Q99550 1183 aa6.72□□□□□ -1.33
HDAC9-205ENST00000411993 SCAND2PQ9GZW5 306 aaPredicted RBP6.72□□□□□ -1.33
HDAC9-205ENST00000411993 RCAN3Q9UKA8 241 aa6.72□□□□□ -1.33
HDAC9-205ENST00000411993 A0A0A6YYJ9 748 aa6.71□□□□□ -1.34
HDAC9-205ENST00000411993 ST20-MTHFSA0A0A6YYL1 179 aa6.71□□□□□ -1.34
HDAC9-205ENST00000411993 FAM83GA6ND36 823 aa6.71□□□□□ -1.34
HDAC9-205ENST00000411993 TOX4O94842 621 aa6.71□□□□□ -1.34
HDAC9-205ENST00000411993 HNRNPLP14866 589 aaKnown RBP eCLIP6.71□□□□□ -1.34
HDAC9-205ENST00000411993 IL2P60568 153 aa6.71□□□□□ -1.34
HDAC9-205ENST00000411993 CRHR2Q13324 411 aa6.71□□□□□ -1.34
HDAC9-205ENST00000411993 LRRC32Q14392 662 aa6.71□□□□□ -1.34
HDAC9-205ENST00000411993 GAREM2Q75VX8 874 aa6.71□□□□□ -1.34
HDAC9-205ENST00000411993 OR2W6PQ8NHA6 318 aa6.71□□□□□ -1.34
HDAC9-205ENST00000411993 HIST1H2AHQ96KK5 128 aa6.71□□□□□ -1.34
HDAC9-205ENST00000411993 GPR101Q96P66 508 aaPredicted RBP6.71□□□□□ -1.34
HDAC9-205ENST00000411993 HIST1H2AJQ99878 128 aa6.71□□□□□ -1.34
HDAC9-205ENST00000411993 NOL10Q9BSC4 688 aaKnown RBP6.71□□□□□ -1.34
HDAC9-205ENST00000411993 PITHD1Q9GZP4 211 aaPredicted RBP6.71□□□□□ -1.34
HDAC9-205ENST00000411993 HAPLN2Q9GZV7 340 aa6.71□□□□□ -1.34
HDAC9-205ENST00000411993 C14orf93Q9H972 538 aaKnown RBP6.71□□□□□ -1.34
HDAC9-205ENST00000411993 GIT1Q9Y2X7 761 aa6.71□□□□□ -1.34
HDAC9-205ENST00000411993 HS3ST3A1Q9Y663 406 aa6.71□□□□□ -1.34
HDAC9-205ENST00000411993 OPHN1O60890 802 aa6.7□□□□□ -1.34
HDAC9-205ENST00000411993 PCDH8O95206 1070 aa6.7□□□□□ -1.34
HDAC9-205ENST00000411993 VSIG10L2P0DP72 767 aa6.7□□□□□ -1.34
HDAC9-205ENST00000411993 SMAD3P84022 425 aaKnown RBP6.7□□□□□ -1.34
HDAC9-205ENST00000411993 GAGE13Q4V321 117 aa6.7□□□□□ -1.34
HDAC9-205ENST00000411993 DALRD3Q5D0E6 543 aaKnown RBP6.7□□□□□ -1.34
HDAC9-205ENST00000411993 MIIPQ5JXC2 388 aa6.7□□□□□ -1.34
HDAC9-205ENST00000411993 UNQ6494/PRO21346Q6UXR6 183 aa6.7□□□□□ -1.34
HDAC9-205ENST00000411993 ESPNLQ6ZVH7 1005 aa6.7□□□□□ -1.34
HDAC9-205ENST00000411993 THEMISQ8N1K5 641 aaPredicted RBP6.7□□□□□ -1.34
HDAC9-205ENST00000411993 ANKRD35Q8N283 1001 aa6.7□□□□□ -1.34
HDAC9-205ENST00000411993 SMC1BQ8NDV3 1235 aa6.7□□□□□ -1.34
HDAC9-205ENST00000411993 GPHA2Q96T91 129 aa6.7□□□□□ -1.34
HDAC9-205ENST00000411993 IL23AQ9NPF7 189 aa6.7□□□□□ -1.34
HDAC9-205ENST00000411993 USP36Q9P275 1121 aaKnown RBP6.7□□□□□ -1.34
HDAC9-205ENST00000411993 NCDNQ9UBB6 729 aa6.7□□□□□ -1.34
HDAC9-205ENST00000411993 MSRAQ9UJ68 235 aa6.7□□□□□ -1.34
HDAC9-205ENST00000411993 SH3BP1Q9Y3L3 701 aa6.7□□□□□ -1.34
HDAC9-205ENST00000411993 NPIPB8E9PQR5 432 aa6.69□□□□□ -1.34
HDAC9-205ENST00000411993 CYR61O00622 381 aa6.69□□□□□ -1.34
HDAC9-205ENST00000411993 FSBPO95073 299 aa6.69□□□□□ -1.34
HDAC9-205ENST00000411993 JUNP05412 331 aaKnown RBP6.69□□□□□ -1.34
HDAC9-205ENST00000411993 PTH1RQ03431 593 aa6.69□□□□□ -1.34
HDAC9-205ENST00000411993 SEPT7Q16181 437 aaKnown RBP6.69□□□□□ -1.34
HDAC9-205ENST00000411993 MAN2A1Q16706 1144 aa6.69□□□□□ -1.34
HDAC9-205ENST00000411993 TAF7LQ5H9L4 462 aa6.69□□□□□ -1.34
HDAC9-205ENST00000411993 C11orf74Q86VG3 221 aa6.69□□□□□ -1.34
HDAC9-205ENST00000411993 IL17DQ8TAD2 202 aa6.69□□□□□ -1.34
HDAC9-205ENST00000411993 ARL8AQ96BM9 186 aa6.69□□□□□ -1.34
HDAC9-205ENST00000411993 ZNF503Q96F45 646 aa6.69□□□□□ -1.34
HDAC9-205ENST00000411993 PLEKHG4BQ96PX9 1271 aa6.69□□□□□ -1.34
HDAC9-205ENST00000411993 UIMC1Q96RL1 719 aa6.69□□□□□ -1.34
HDAC9-205ENST00000411993 TCF25Q9BQ70 676 aa6.69□□□□□ -1.34
HDAC9-205ENST00000411993 AURKAIP1Q9NWT8 199 aaPredicted RBP6.69□□□□□ -1.34
HDAC9-205ENST00000411993 UBE2QL1A1L167 161 aa6.68□□□□□ -1.34
HDAC9-205ENST00000411993 TGM5O43548 720 aa6.68□□□□□ -1.34
HDAC9-205ENST00000411993 LSP1P33241 339 aa6.68□□□□□ -1.34
HDAC9-205ENST00000411993 ACVRL1P37023 503 aa6.68□□□□□ -1.34
HDAC9-205ENST00000411993 ADAM8P78325 824 aa6.68□□□□□ -1.34
HDAC9-205ENST00000411993 FAM111BQ6SJ93 734 aa6.68□□□□□ -1.34
HDAC9-205ENST00000411993 KIAA0907Q7Z7F0 614 aaPredicted RBP6.68□□□□□ -1.34
HDAC9-205ENST00000411993 ZFPM1Q8IX07 1006 aa6.68□□□□□ -1.34
HDAC9-205ENST00000411993 SPTLC3Q9NUV7 552 aa6.68□□□□□ -1.34
HDAC9-205ENST00000411993 USP35Q9P2H5 1018 aa6.68□□□□□ -1.34
HDAC9-205ENST00000411993 ELL2O00472 640 aaPredicted RBP6.67□□□□□ -1.34
HDAC9-205ENST00000411993 ZNF202O95125 648 aa6.67□□□□□ -1.34
HDAC9-205ENST00000411993 C1SP09871 688 aa6.67□□□□□ -1.34
HDAC9-205ENST00000411993 LSSP48449 732 aa6.67□□□□□ -1.34
HDAC9-205ENST00000411993 DGCR2P98153 550 aa6.67□□□□□ -1.34
HDAC9-205ENST00000411993 ELAVL1Q15717 326 aaKnown RBP6.67□□□□□ -1.34
HDAC9-205ENST00000411993 LSM12Q3MHD2 195 aaKnown RBP6.67□□□□□ -1.34
HDAC9-205ENST00000411993 GPR158Q5T848 1215 aa6.67□□□□□ -1.34
HDAC9-205ENST00000411993 SPTY2D1Q68D10 685 aaPredicted RBP6.67□□□□□ -1.34
HDAC9-205ENST00000411993 LEO1Q8WVC0 666 aaPredicted RBP6.67□□□□□ -1.34
HDAC9-205ENST00000411993 MIEF2Q96C03 454 aa6.67□□□□□ -1.34
HDAC9-205ENST00000411993 SORCS2Q96PQ0 1159 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms