RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 LONRF3Q496Y0 759 aa13.3□□□□□ -0.28
NEDD1-202ENST00000411739 TPRNQ4KMQ1 711 aa13.3□□□□□ -0.28
NEDD1-202ENST00000411739 LINC00301Q8NCQ3 95 aa13.3□□□□□ -0.28
NEDD1-202ENST00000411739 BSNDQ8WZ55 320 aa13.3□□□□□ -0.28
NEDD1-202ENST00000411739 TOP1MTQ969P6 601 aa13.3□□□□□ -0.28
NEDD1-202ENST00000411739 ZNF576Q9H609 170 aa13.3□□□□□ -0.28
NEDD1-202ENST00000411739 SLC28A3Q9HAS3 691 aa13.3□□□□□ -0.28
NEDD1-202ENST00000411739 MTUS1Q9ULD2 1270 aa13.3□□□□□ -0.28
NEDD1-202ENST00000411739 PPME1Q9Y570 386 aa13.3□□□□□ -0.28
NEDD1-202ENST00000411739 PCDHA11Q9Y5I1 949 aa13.3□□□□□ -0.28
NEDD1-202ENST00000411739 SRPRBQ9Y5M8 271 aaKnown RBP13.3□□□□□ -0.28
NEDD1-202ENST00000411739 MYO9BQ13459 2157 aa13.3□□□□□ -0.28
NEDD1-202ENST00000411739 CHD9Q3L8U1 2897 aa13.3□□□□□ -0.28
NEDD1-202ENST00000411739 NPHP3-ACAD11A0A0J9YXS1 232 aa13.3□□□□□ -0.28
NEDD1-202ENST00000411739 SFI1A8K8P3 1242 aa13.3□□□□□ -0.28
NEDD1-202ENST00000411739 EYA4O95677 639 aa13.3□□□□□ -0.28
NEDD1-202ENST00000411739 BRD1O95696 1058 aa13.3□□□□□ -0.28
NEDD1-202ENST00000411739 CYP11B2P19099 503 aa13.3□□□□□ -0.28
NEDD1-202ENST00000411739 LONP1P36776 959 aaKnown RBP13.3□□□□□ -0.28
NEDD1-202ENST00000411739 NASPP49321 788 aaPredicted RBP13.3□□□□□ -0.28
NEDD1-202ENST00000411739 CACNB1Q02641 598 aaPredicted RBP13.3□□□□□ -0.28
NEDD1-202ENST00000411739 GRIN2CQ14957 1233 aa13.3□□□□□ -0.28
NEDD1-202ENST00000411739 EXOC8Q8IYI6 725 aa13.3□□□□□ -0.28
NEDD1-202ENST00000411739 SYMPKQ92797 1274 aaKnown RBP13.3□□□□□ -0.28
NEDD1-202ENST00000411739 USP20Q9Y2K6 914 aa13.3□□□□□ -0.28
NEDD1-202ENST00000411739 RFXAPO00287 272 aa13.29□□□□□ -0.28
NEDD1-202ENST00000411739 PLCG1P19174 1290 aa13.29□□□□□ -0.28
NEDD1-202ENST00000411739 RAB30Q15771 203 aa13.29□□□□□ -0.28
NEDD1-202ENST00000411739 PPP2R2DQ66LE6 453 aa13.29□□□□□ -0.28
NEDD1-202ENST00000411739 CATSPER4Q7RTX7 472 aa13.29□□□□□ -0.28
NEDD1-202ENST00000411739 ZNF410Q86VK4 478 aa13.29□□□□□ -0.28
NEDD1-202ENST00000411739 AK8Q96MA6 479 aa13.29□□□□□ -0.28
NEDD1-202ENST00000411739 KIFC3Q9BVG8 833 aa13.29□□□□□ -0.28
NEDD1-202ENST00000411739 TSPYL2Q9H2G4 693 aaPredicted RBP13.29□□□□□ -0.28
NEDD1-202ENST00000411739 STK24Q9Y6E0 443 aa13.29□□□□□ -0.28
NEDD1-202ENST00000411739 LRRIQ4A6NIV6 560 aa13.29□□□□□ -0.28
NEDD1-202ENST00000411739 SPTLC2O15270 562 aa13.29□□□□□ -0.28
NEDD1-202ENST00000411739 PLA2G4BP0C869 781 aa13.29□□□□□ -0.28
NEDD1-202ENST00000411739 LIG1P18858 919 aa13.29□□□□□ -0.28
NEDD1-202ENST00000411739 MUTP22033 750 aa13.29□□□□□ -0.28
NEDD1-202ENST00000411739 TMEM119Q4V9L6 283 aa13.29□□□□□ -0.28
NEDD1-202ENST00000411739 RINT1Q6NUQ1 792 aa13.29□□□□□ -0.28
NEDD1-202ENST00000411739 RNF169Q8NCN4 708 aa13.29□□□□□ -0.28
NEDD1-202ENST00000411739 CALML4Q96GE6 196 aa13.29□□□□□ -0.28
NEDD1-202ENST00000411739 YME1L1Q96TA2 773 aa13.29□□□□□ -0.28
NEDD1-202ENST00000411739 FTHL17Q9BXU8 183 aa13.29□□□□□ -0.28
NEDD1-202ENST00000411739 INO80B-WBP1J3KQ70 363 aa13.28□□□□□ -0.28
NEDD1-202ENST00000411739 GAS2O43903 313 aaKnown RBP13.28□□□□□ -0.28
NEDD1-202ENST00000411739 NCLP19338 710 aaKnown RBP13.28□□□□□ -0.28
NEDD1-202ENST00000411739 MCM6Q14566 821 aa13.28□□□□□ -0.28
NEDD1-202ENST00000411739 DSC3Q14574 896 aa13.28□□□□□ -0.28
NEDD1-202ENST00000411739 MXD4Q14582 209 aaPredicted RBP13.28□□□□□ -0.28
NEDD1-202ENST00000411739 PAN2Q504Q3 1202 aaKnown RBP13.28□□□□□ -0.28
NEDD1-202ENST00000411739 HYIQ5T013 277 aa13.28□□□□□ -0.28
NEDD1-202ENST00000411739 KRI1Q8N9T8 703 aaKnown RBP13.28□□□□□ -0.28
NEDD1-202ENST00000411739 RAD9AQ99638 391 aa13.28□□□□□ -0.28
NEDD1-202ENST00000411739 INO80BQ9C086 356 aaPredicted RBP13.28□□□□□ -0.28
NEDD1-202ENST00000411739 RGS18Q9NS28 235 aa13.28□□□□□ -0.28
NEDD1-202ENST00000411739 MTMR10Q9NXD2 777 aa13.28□□□□□ -0.28
NEDD1-202ENST00000411739 PIN4Q9Y237 131 aaKnown RBP13.28□□□□□ -0.28
NEDD1-202ENST00000411739 CHD7Q9P2D1 2997 aa13.28□□□□□ -0.28
NEDD1-202ENST00000411739 ASAP2O43150 1006 aa13.28□□□□□ -0.28
NEDD1-202ENST00000411739 ZSCAN20P17040 1043 aaPredicted RBP13.28□□□□□ -0.28
NEDD1-202ENST00000411739 CDC42EP1Q00587 391 aa13.28□□□□□ -0.28
NEDD1-202ENST00000411739 TAP1Q03518 808 aa13.28□□□□□ -0.28
NEDD1-202ENST00000411739 C1orf186Q6ZWK4 172 aa13.28□□□□□ -0.28
NEDD1-202ENST00000411739 CDR2LQ86X02 465 aaPredicted RBP13.28□□□□□ -0.28
NEDD1-202ENST00000411739 MCPH1Q8NEM0 835 aa13.28□□□□□ -0.28
NEDD1-202ENST00000411739 CPB2Q96IY4 423 aa13.28□□□□□ -0.28
NEDD1-202ENST00000411739 GUCD1Q96NT3 240 aa13.28□□□□□ -0.28
NEDD1-202ENST00000411739 PRDM12Q9H4Q4 367 aa13.28□□□□□ -0.28
NEDD1-202ENST00000411739 BLOC1S4Q9NUP1 217 aa13.28□□□□□ -0.28
NEDD1-202ENST00000411739 C9IYK1 514 aa13.27□□□□□ -0.29
NEDD1-202ENST00000411739 HIP1RO75146 1068 aa13.27□□□□□ -0.29
NEDD1-202ENST00000411739 SFPQP23246 707 aaKnown RBP eCLIP13.27□□□□□ -0.29
NEDD1-202ENST00000411739 PHKA2P46019 1235 aa13.27□□□□□ -0.29
NEDD1-202ENST00000411739 SLC12A3P55017 1021 aa13.27□□□□□ -0.29
NEDD1-202ENST00000411739 PTENP60484 403 aa13.27□□□□□ -0.29
NEDD1-202ENST00000411739 DAW1Q8N136 415 aa13.27□□□□□ -0.29
NEDD1-202ENST00000411739 PDILTQ8N807 584 aa13.27□□□□□ -0.29
NEDD1-202ENST00000411739 MYLIPQ8WY64 445 aa13.27□□□□□ -0.29
NEDD1-202ENST00000411739 ARNTL2Q8WYA1 636 aa13.27□□□□□ -0.29
NEDD1-202ENST00000411739 NT5C3AQ9H0P0 336 aa13.27□□□□□ -0.29
NEDD1-202ENST00000411739 LRFN2Q9ULH4 789 aa13.27□□□□□ -0.29
NEDD1-202ENST00000411739 A0A087X0B3 334 aa13.27□□□□□ -0.29
NEDD1-202ENST00000411739 EPOPA6NHQ4 379 aa13.27□□□□□ -0.29
NEDD1-202ENST00000411739 B4GALT5O43286 388 aa13.27□□□□□ -0.29
NEDD1-202ENST00000411739 FGFR1P11362 822 aa13.27□□□□□ -0.29
NEDD1-202ENST00000411739 TFDP1Q14186 410 aa13.27□□□□□ -0.29
NEDD1-202ENST00000411739 ODR4Q5SWX8 454 aa13.27□□□□□ -0.29
NEDD1-202ENST00000411739 SLC24A5Q71RS6 500 aa13.27□□□□□ -0.29
NEDD1-202ENST00000411739 SYT2Q8N9I0 419 aaPredicted RBP13.27□□□□□ -0.29
NEDD1-202ENST00000411739 CDX2Q99626 313 aaPredicted RBP13.27□□□□□ -0.29
NEDD1-202ENST00000411739 INSL6Q9Y581 213 aa13.27□□□□□ -0.29
NEDD1-202ENST00000411739 PCDHB7Q9Y5E2 793 aa13.27□□□□□ -0.29
NEDD1-202ENST00000411739 TTC3P53804 2025 aa13.26□□□□□ -0.29
NEDD1-202ENST00000411739 MYH15Q9Y2K3 1946 aa13.26□□□□□ -0.29
NEDD1-202ENST00000411739 LINC01553A4QN01 128 aa13.26□□□□□ -0.29
NEDD1-202ENST00000411739 TTLL13PA6NNM8 815 aa13.26□□□□□ -0.29
NEDD1-202ENST00000411739 HOXA11P31270 313 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms