RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 MAEAQ7L5Y9 396 aa18.14■□□□□ 0.49
NOD1-202ENST00000411552 NPAS4Q8IUM7 802 aa18.14■□□□□ 0.49
NOD1-202ENST00000411552 RNF149Q8NC42 400 aa18.14■□□□□ 0.49
NOD1-202ENST00000411552 MCPH1Q8NEM0 835 aa18.14■□□□□ 0.49
NOD1-202ENST00000411552 SP7Q8TDD2 431 aaPredicted RBP18.14■□□□□ 0.49
NOD1-202ENST00000411552 FOXD4L4Q8WXT5 416 aaPredicted RBP18.14■□□□□ 0.49
NOD1-202ENST00000411552 AK8Q96MA6 479 aa18.14■□□□□ 0.49
NOD1-202ENST00000411552 INO80BQ9C086 356 aaPredicted RBP18.14■□□□□ 0.49
NOD1-202ENST00000411552 POLR3FQ9H1D9 316 aaPredicted RBP18.14■□□□□ 0.49
NOD1-202ENST00000411552 MINDY3Q9H8M7 445 aa18.14■□□□□ 0.49
NOD1-202ENST00000411552 CERS4Q9HA82 394 aa18.14■□□□□ 0.49
NOD1-202ENST00000411552 RC3H2Q9HBD1 1191 aaKnown RBP18.14■□□□□ 0.49
NOD1-202ENST00000411552 C1orf112Q9NSG2 853 aa18.14■□□□□ 0.49
NOD1-202ENST00000411552 DNM3Q9UQ16 869 aa18.14■□□□□ 0.49
NOD1-202ENST00000411552 COL4A6Q14031 1691 aa18.14■□□□□ 0.49
NOD1-202ENST00000411552 E9PMD0 336 aa18.13■□□□□ 0.49
NOD1-202ENST00000411552 EYA4O95677 639 aa18.13■□□□□ 0.49
NOD1-202ENST00000411552 PDIA4P13667 645 aaKnown RBP18.13■□□□□ 0.49
NOD1-202ENST00000411552 CYP11B2P19099 503 aa18.13■□□□□ 0.49
NOD1-202ENST00000411552 IBSPP21815 317 aaPredicted RBP18.13■□□□□ 0.49
NOD1-202ENST00000411552 GLRA2P23416 452 aa18.13■□□□□ 0.49
NOD1-202ENST00000411552 GRB10Q13322 594 aa18.13■□□□□ 0.49
NOD1-202ENST00000411552 PKP1Q13835 747 aa18.13■□□□□ 0.49
NOD1-202ENST00000411552 CAPSQ13938 189 aa18.13■□□□□ 0.49
NOD1-202ENST00000411552 HYIQ5T013 277 aa18.13■□□□□ 0.49
NOD1-202ENST00000411552 KCNK18Q7Z418 384 aa18.13■□□□□ 0.49
NOD1-202ENST00000411552 SRGAP1Q7Z6B7 1085 aa18.13■□□□□ 0.49
NOD1-202ENST00000411552 PNMA5Q96PV4 448 aa18.13■□□□□ 0.49
NOD1-202ENST00000411552 USP28Q96RU2 1077 aa18.13■□□□□ 0.49
NOD1-202ENST00000411552 STXBP5LQ9Y2K9 1186 aa18.13■□□□□ 0.49
NOD1-202ENST00000411552 EPOPA6NHQ4 379 aa18.12■□□□□ 0.49
NOD1-202ENST00000411552 DGKIO75912 1065 aa18.12■□□□□ 0.49
NOD1-202ENST00000411552 STAG3L1P0CL83 205 aa18.12■□□□□ 0.49
NOD1-202ENST00000411552 ZSCAN22P10073 491 aaPredicted RBP18.12■□□□□ 0.49
NOD1-202ENST00000411552 ZSCAN20P17040 1043 aaPredicted RBP18.12■□□□□ 0.49
NOD1-202ENST00000411552 MARCKSP29966 332 aaPredicted RBP18.12■□□□□ 0.49
NOD1-202ENST00000411552 LONP1P36776 959 aaKnown RBP18.12■□□□□ 0.49
NOD1-202ENST00000411552 PHKA2P46019 1235 aa18.12■□□□□ 0.49
NOD1-202ENST00000411552 PTENP60484 403 aa18.12■□□□□ 0.49
NOD1-202ENST00000411552 FAM189BP81408 668 aa18.12■□□□□ 0.49
NOD1-202ENST00000411552 TFDP1Q14186 410 aa18.12■□□□□ 0.49
NOD1-202ENST00000411552 FAM102BQ5T8I3 360 aa18.12■□□□□ 0.49
NOD1-202ENST00000411552 CATSPER4Q7RTX7 472 aa18.12■□□□□ 0.49
NOD1-202ENST00000411552 CABP7Q86V35 215 aa18.12■□□□□ 0.49
NOD1-202ENST00000411552 ARNTL2Q8WYA1 636 aa18.12■□□□□ 0.49
NOD1-202ENST00000411552 ZNF689Q96CS4 500 aaPredicted RBP18.12■□□□□ 0.49
NOD1-202ENST00000411552 PLIN2Q99541 437 aa18.12■□□□□ 0.49
NOD1-202ENST00000411552 LRFN2Q9ULH4 789 aa18.12■□□□□ 0.49
NOD1-202ENST00000411552 PCDHB7Q9Y5E2 793 aa18.12■□□□□ 0.49
NOD1-202ENST00000411552 PRUNE2Q8WUY3 3088 aa18.12■□□□□ 0.49
NOD1-202ENST00000411552 UBA7P41226 1012 aa18.11■□□□□ 0.49
NOD1-202ENST00000411552 GATMP50440 423 aa18.11■□□□□ 0.49
NOD1-202ENST00000411552 POU5F1BQ06416 359 aa18.11■□□□□ 0.49
NOD1-202ENST00000411552 TMEM119Q4V9L6 283 aa18.11■□□□□ 0.49
NOD1-202ENST00000411552 CDK5RAP3Q96JB5 506 aa18.11■□□□□ 0.49
NOD1-202ENST00000411552 TGS1Q96RS0 853 aaKnown RBP18.11■□□□□ 0.49
NOD1-202ENST00000411552 NT5C3AQ9H0P0 336 aa18.11■□□□□ 0.49
NOD1-202ENST00000411552 CHST12Q9NRB3 414 aa18.11■□□□□ 0.49
NOD1-202ENST00000411552 FBXO2Q9UK22 296 aaPredicted RBP18.11■□□□□ 0.49
NOD1-202ENST00000411552 MTUS1Q9ULD2 1270 aa18.11■□□□□ 0.49
NOD1-202ENST00000411552 PIN4Q9Y237 131 aaKnown RBP18.11■□□□□ 0.49
NOD1-202ENST00000411552 ADGRA3Q8IWK6 1321 aa18.11■□□□□ 0.49
NOD1-202ENST00000411552 NLRC5Q86WI3 1866 aa18.11■□□□□ 0.49
NOD1-202ENST00000411552 FNDC1Q4ZHG4 1894 aaPredicted RBP18.1■□□□□ 0.49
NOD1-202ENST00000411552 RFXAPO00287 272 aa18.1■□□□□ 0.49
NOD1-202ENST00000411552 SLC26A4O43511 780 aa18.1■□□□□ 0.49
NOD1-202ENST00000411552 F13A1P00488 732 aa18.1■□□□□ 0.49
NOD1-202ENST00000411552 FOSL2P15408 326 aa18.1■□□□□ 0.49
NOD1-202ENST00000411552 NASPP49321 788 aaPredicted RBP18.1■□□□□ 0.49
NOD1-202ENST00000411552 ERVK-21P61565 698 aa18.1■□□□□ 0.49
NOD1-202ENST00000411552 SLC39A14Q15043 492 aa18.1■□□□□ 0.49
NOD1-202ENST00000411552 IFNLR1Q8IU57 520 aaPredicted RBP18.1■□□□□ 0.49
NOD1-202ENST00000411552 BSNDQ8WZ55 320 aa18.1■□□□□ 0.49
NOD1-202ENST00000411552 C17orf80Q9BSJ5 609 aa18.1■□□□□ 0.49
NOD1-202ENST00000411552 RUSC1Q9BVN2 902 aa18.1■□□□□ 0.49
NOD1-202ENST00000411552 NFKBIZQ9BYH8 718 aa18.1■□□□□ 0.49
NOD1-202ENST00000411552 CSRNP2Q9H175 543 aa18.1■□□□□ 0.49
NOD1-202ENST00000411552 POLD4Q9HCU8 107 aa18.1■□□□□ 0.49
NOD1-202ENST00000411552 AGPAT5Q9NUQ2 364 aa18.1■□□□□ 0.49
NOD1-202ENST00000411552 RNF216Q9NWF9 866 aaPredicted RBP18.1■□□□□ 0.49
NOD1-202ENST00000411552 TMEM161AQ9NX61 479 aa18.1■□□□□ 0.49
NOD1-202ENST00000411552 DACT1Q9NYF0 836 aa18.1■□□□□ 0.49
NOD1-202ENST00000411552 SRPRBQ9Y5M8 271 aaKnown RBP18.1■□□□□ 0.49
NOD1-202ENST00000411552 REV3LO60673 3130 aa18.09■□□□□ 0.49
NOD1-202ENST00000411552 LRRIQ4A6NIV6 560 aa18.09■□□□□ 0.49
NOD1-202ENST00000411552 MBTD1Q05BQ5 628 aa18.09■□□□□ 0.49
NOD1-202ENST00000411552 BTG3Q14201 252 aaPredicted RBP18.09■□□□□ 0.49
NOD1-202ENST00000411552 ADGRE1Q14246 886 aa18.09■□□□□ 0.49
NOD1-202ENST00000411552 SPECC1Q5M775 1068 aa18.09■□□□□ 0.49
NOD1-202ENST00000411552 TWF2Q6IBS0 349 aaKnown RBP18.09■□□□□ 0.49
NOD1-202ENST00000411552 ECHDC2Q86YB7 292 aa18.09■□□□□ 0.49
NOD1-202ENST00000411552 FIBCD1Q8N539 461 aa18.09■□□□□ 0.49
NOD1-202ENST00000411552 KCTD17Q8N5Z5 321 aa18.09■□□□□ 0.49
NOD1-202ENST00000411552 ZNF396Q96N95 335 aaPredicted RBP18.09■□□□□ 0.49
NOD1-202ENST00000411552 CLIC6Q96NY7 704 aa18.09■□□□□ 0.49
NOD1-202ENST00000411552 GAS2L1Q99501 681 aaPredicted RBP18.09■□□□□ 0.49
NOD1-202ENST00000411552 ELAC1Q9H777 363 aaKnown RBP18.09■□□□□ 0.49
NOD1-202ENST00000411552 TFIP11Q9UBB9 837 aaKnown RBP18.09■□□□□ 0.49
NOD1-202ENST00000411552 MORC2Q9Y6X9 1032 aaPredicted RBP18.09■□□□□ 0.49
NOD1-202ENST00000411552 RALGAPA2Q2PPJ7 1873 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms